© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3390 |
| Gene name | |
| Location | Contig_1882:1501..3786 |
| Strand | + |
| Gene length (bp) | 2285 |
| Transcript length (bp) | 1917 |
| Coding sequence length (bp) | 1917 |
| Protein length (aa) | 639 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.35 | 0.9045 | 0.0395 | 0.0236 | 0.0895 | 0.011 | 0.0397 | 0.0337 | 0.0402 | 0.0081 |
| Orthofinder run ID | 4 |
| Orthogroup | 6599 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps australis 1348a (Ghana) | OphauG2|5627 |
| Ophiocordyceps australis map64 (Brazil) | OphauB2|7402 |
| Ophiocordyceps subramaniannii | Hirsu2|3390 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3390 METGSGEGAAAAAAARKRISMACEACRATKVRCRPSGYPGVCQKCLASKRECISRTGPRPRRSRRANPPPPDDGD TRHRPVLPAHGPSSTFSIDFAIAARADTDHNLDLLRTSHQRALDQLFPSDEDEDDDDDDDDDDDDESAGSPPPRL SIHDFQGKPLFNLASAEALLATFRGRKLAQLPVVALAEAEATVPRLAAARPFVLLAVLAATSGSKSVRGHGLYDD EFRKVLSLKFVAGGERELELLQGLLVYCAWYPFHLRPRDRQGFQYLRMALDLVRDLDLDRPLPLDLDLAAGMDMT ERQLDGVRAYLGYVYITTTHILSWKTKVTIANAIRAWTPVYCDMLERAARVEGDVVLANMARLSCLLNEAFTVTH EQSGQPEPHRRLLLSGLGVRLGEIRARIPPSVPPSAPLRMQLLFVDLYLDCGPLLRIPRATAPRLVDDGVLPPTP AQLHAGAAKLGALLRTVAEADAAALLHYTLDDWVRLILSVTLALRLSFPLAQCPLFDAGWARDQLGFDRFLAAVC ADGPAKAAAVDVLSASRVVLGVVRDKYHRRLRALHQRLDPPRDKSNGCPIFDGGLEPYFPLWEAADDAPAQAQAP PLPGGWVAAEPLAMPVFHDLWEAMTMGWAGQEACPQPR* |
| Coding | >Hirsu2|3390 ATGGAGACCGGGTCGGGCGAGGGCGCCGCCGCCGCCGCCGCCGCGCGCAAGCGCATCTCCATGGCCTGCGAGGCC TGTCGGGCCACCAAGGTCCGGTGCCGGCCGAGTGGCTATCCCGGCGTCTGCCAAAAGTGTCTGGCCTCCAAGAGA GAGTGCATCTCGCGCACCGGCCCGCGGCCCCGACGGTCACGACGAGCCAACCCCCCCCCGCCCGACGACGGCGAC ACGCGCCACCGGCCGGTGCTACCGGCCCACGGCCCGTCGAGCACCTTCAGCATCGACTTCGCCATCGCGGCGCGG GCCGACACGGACCACAACCTCGACCTACTGCGGACGTCGCACCAGCGGGCCCTGGACCAGCTGTTCCCCAGCGAC GAAGACGAAGACGACGACGACGACGATGACGACGACGACGACGACGAAAGCGCGGGCTCGCCGCCGCCGCGCCTG TCCATCCACGACTTCCAGGGCAAGCCGCTCTTCAACCTAGCCTCGGCCGAGGCGCTGCTGGCGACGTTCCGCGGC CGCAAGCTGGCGCAGCTGCCGGTGGTGGCGCTGGCCGAGGCCGAGGCGACGGTGCCGCGGCTGGCGGCGGCGCGG CCCTTCGTCCTGCTGGCCGTCCTGGCCGCCACGTCGGGCTCCAAGTCGGTGCGCGGCCACGGCCTGTACGACGAC GAGTTCCGCAAGGTGCTCAGCCTCAAGTTCGTCGCCGGCGGCGAGCGAGAGCTCGAGCTGCTGCAGGGCCTGCTC GTCTACTGCGCCTGGTACCCCTTCCACCTGCGCCCGCGCGACCGCCAGGGCTTCCAGTACCTGCGCATGGCCCTC GACCTCGTCCGCGACCTGGACCTGGATCGGCCGCTGCCGCTGGACCTCGACCTCGCCGCCGGCATGGACATGACG GAGCGGCAGCTCGACGGTGTGCGCGCCTACCTGGGCTACGTCTACATCACCACCACACACATCCTCTCGTGGAAG ACAAAGGTCACCATCGCAAACGCCATCCGCGCCTGGACGCCCGTCTACTGCGACATGCTCGAGCGGGCCGCCCGG GTCGAGGGCGACGTCGTGCTGGCCAACATGGCCCGGCTCTCGTGCCTGCTGAACGAGGCCTTCACCGTGACGCAC GAGCAGAGCGGCCAGCCCGAGCCGCACCGCCGCCTGCTCCTGTCCGGCCTCGGCGTCCGGCTCGGCGAGATCCGG GCCCGGATCCCTCCCTCGGTCCCGCCCAGCGCGCCCCTGCGGATGCAGCTCCTCTTCGTCGACCTATACCTCGAC TGCGGCCCTCTGCTGCGGATCCCGCGCGCGACGGCACCGCGCCTCGTCGACGACGGCGTCCTGCCGCCGACGCCG GCGCAGCTGCACGCCGGCGCGGCCAAGCTAGGCGCGCTGCTGCGTACCGTGGCCGAGGCCGACGCGGCCGCGCTG CTGCACTACACGCTCGACGACTGGGTGCGGCTGATCCTGAGCGTGACGCTGGCGCTGCGCCTGTCCTTCCCGCTG GCGCAGTGCCCGCTCTTCGACGCCGGCTGGGCCCGCGACCAGCTCGGCTTCGACCGCTTCCTGGCCGCCGTCTGC GCCGACGGGCCGGCCAAGGCGGCCGCCGTCGACGTCCTGTCCGCCAGCCGCGTCGTCCTCGGCGTCGTCCGCGAC AAGTACCACCGCCGCCTGCGCGCGCTGCACCAGCGCCTCGACCCGCCGCGCGACAAGAGCAACGGCTGCCCCATC TTCGACGGCGGCCTGGAGCCCTACTTCCCGCTGTGGGAGGCGGCCGACGACGCGCCGGCCCAGGCCCAGGCACCA CCCCTGCCCGGAGGCTGGGTCGCCGCCGAACCGCTCGCCATGCCCGTCTTCCACGACCTGTGGGAGGCCATGACG ATGGGCTGGGCCGGCCAGGAGGCCTGTCCGCAGCCGCGGTAG |
| Transcript | >Hirsu2|3390 ATGGAGACCGGGTCGGGCGAGGGCGCCGCCGCCGCCGCCGCCGCGCGCAAGCGCATCTCCATGGCCTGCGAGGCC TGTCGGGCCACCAAGGTCCGGTGCCGGCCGAGTGGCTATCCCGGCGTCTGCCAAAAGTGTCTGGCCTCCAAGAGA GAGTGCATCTCGCGCACCGGCCCGCGGCCCCGACGGTCACGACGAGCCAACCCCCCCCCGCCCGACGACGGCGAC ACGCGCCACCGGCCGGTGCTACCGGCCCACGGCCCGTCGAGCACCTTCAGCATCGACTTCGCCATCGCGGCGCGG GCCGACACGGACCACAACCTCGACCTACTGCGGACGTCGCACCAGCGGGCCCTGGACCAGCTGTTCCCCAGCGAC GAAGACGAAGACGACGACGACGACGATGACGACGACGACGACGACGAAAGCGCGGGCTCGCCGCCGCCGCGCCTG TCCATCCACGACTTCCAGGGCAAGCCGCTCTTCAACCTAGCCTCGGCCGAGGCGCTGCTGGCGACGTTCCGCGGC CGCAAGCTGGCGCAGCTGCCGGTGGTGGCGCTGGCCGAGGCCGAGGCGACGGTGCCGCGGCTGGCGGCGGCGCGG CCCTTCGTCCTGCTGGCCGTCCTGGCCGCCACGTCGGGCTCCAAGTCGGTGCGCGGCCACGGCCTGTACGACGAC GAGTTCCGCAAGGTGCTCAGCCTCAAGTTCGTCGCCGGCGGCGAGCGAGAGCTCGAGCTGCTGCAGGGCCTGCTC GTCTACTGCGCCTGGTACCCCTTCCACCTGCGCCCGCGCGACCGCCAGGGCTTCCAGTACCTGCGCATGGCCCTC GACCTCGTCCGCGACCTGGACCTGGATCGGCCGCTGCCGCTGGACCTCGACCTCGCCGCCGGCATGGACATGACG GAGCGGCAGCTCGACGGTGTGCGCGCCTACCTGGGCTACGTCTACATCACCACCACACACATCCTCTCGTGGAAG ACAAAGGTCACCATCGCAAACGCCATCCGCGCCTGGACGCCCGTCTACTGCGACATGCTCGAGCGGGCCGCCCGG GTCGAGGGCGACGTCGTGCTGGCCAACATGGCCCGGCTCTCGTGCCTGCTGAACGAGGCCTTCACCGTGACGCAC GAGCAGAGCGGCCAGCCCGAGCCGCACCGCCGCCTGCTCCTGTCCGGCCTCGGCGTCCGGCTCGGCGAGATCCGG GCCCGGATCCCTCCCTCGGTCCCGCCCAGCGCGCCCCTGCGGATGCAGCTCCTCTTCGTCGACCTATACCTCGAC TGCGGCCCTCTGCTGCGGATCCCGCGCGCGACGGCACCGCGCCTCGTCGACGACGGCGTCCTGCCGCCGACGCCG GCGCAGCTGCACGCCGGCGCGGCCAAGCTAGGCGCGCTGCTGCGTACCGTGGCCGAGGCCGACGCGGCCGCGCTG CTGCACTACACGCTCGACGACTGGGTGCGGCTGATCCTGAGCGTGACGCTGGCGCTGCGCCTGTCCTTCCCGCTG GCGCAGTGCCCGCTCTTCGACGCCGGCTGGGCCCGCGACCAGCTCGGCTTCGACCGCTTCCTGGCCGCCGTCTGC GCCGACGGGCCGGCCAAGGCGGCCGCCGTCGACGTCCTGTCCGCCAGCCGCGTCGTCCTCGGCGTCGTCCGCGAC AAGTACCACCGCCGCCTGCGCGCGCTGCACCAGCGCCTCGACCCGCCGCGCGACAAGAGCAACGGCTGCCCCATC TTCGACGGCGGCCTGGAGCCCTACTTCCCGCTGTGGGAGGCGGCCGACGACGCGCCGGCCCAGGCCCAGGCACCA CCCCTGCCCGGAGGCTGGGTCGCCGCCGAACCGCTCGCCATGCCCGTCTTCCACGACCTGTGGGAGGCCATGACG ATGGGCTGGGCCGGCCAGGAGGCCTGTCCGCAGCCGCGGTAG |
| Gene | >Hirsu2|3390 ATGGAGACCGGGTCGGGCGAGGGCGCCGCCGCCGCCGCCGCCGCGCGCAAGCGCATCTCCATGGCCTGCGAGGCC TGTCGGGCCACCAAGGTCCGGTGCCGGCCGAGTGGCTATCCCGGCGTCTGCCAAAAGTACGTCGACCTGCTCCCT TTCCTCCCCCTTCACACTCGCCAAAAGAGCTCGTTCTGACCGGCGCACGCGGAGGGCAGGTGTCTGGCCTCCAAG AGAGAGTGCATCTCGCGCACCGGCCCGCGGCCCCGACGGTCACGACGAGCCAACCCGTGAGTCCGAGCCAAGCCG TACCCTCTCTGTGCCGGCTCCTGTGCCGGCTGGACGGCGACTGACGGCGGCGCGGCAGCCCCCCGCCCGACGACG GCGACACGCGCCACCGGCCGGTGCTACCGGCCCACGGCCCGTCGAGCACCTTCAGCATCGACTTCGCCATCGCGG CGCGGGCCGACACGGACCACAACCTCGACCTACTGCGGACGTCGCACCAGCGGGCCCTGGACCAGCTGTTCCCCA GCGACGAAGACGAAGACGACGACGACGACGATGACGACGACGACGACGACGAAAGCGCGGGCTCGCCGCCGCCGC GCCTGTCCATCCACGACTTCCAGGGCAAGCCGCTCTTCAACCTAGCCTCGGCCGAGGCGCTGCTGGCGACGTTCC GCGGCCGCAAGCTGGCGCAGCTGCCGGTGGTGGCGCTGGCCGAGGCCGAGGCGACGGTGCCGCGGCTGGCGGCGG CGCGGCCCTTCGTCCTGCTGGCCGTCCTGGCCGCCACGTCGGGCTCCAAGTCGGTGCGCGGCCACGGCCTGTACG ACGACGAGTTCCGCAAGGTGCTCAGCCTCAAGTTCGTCGCCGGCGGCGAGCGAGAGCTCGAGCTGCTGCAGGGCC TGCTCGTCTACTGCGCCTGGTACCCCTTCCACCTGCGCCCGCGCGACCGCCAGGGCTTCCAGTACCTGCGCATGG CCCTCGACCTCGTCCGCGACCTGGACCTGGATCGGCCGCTGCCGCTGGACCTCGACCTCGCCGCCGGCATGGACA TGACGGAGCGGCAGCTCGACGGTGTGCGCGCCTACCTGGGCTACGTCTACATCACCACCACGTGAGCTCCCTCTT CTTGACTCTTTTCTCTCTCTCTCCATCTCTCTCTCTCTCTCTCTGTCCTGCCGCTGAAAACGATACCCTCCCCCC CCTCAGACACATCCTCTCGTGGAAGACAAAGGTCACCATCGCAAACGCCATCCGCGCCTGGACGCCCGTCTACTG CGACATGCTCGAGCGGGCCGCCCGGGTCGAGGGCGACGTCGTGCTGGCCAACATGGCCCGGCTCTCGTGCCTGCT GAACGAGGCCTTCACCGTGACGCACGAGCAGAGCGGCCAGCCCGAGCCGCACCGCCGCCTGCTCCTGTCCGGCCT CGGCGTCCGGCTCGGCGAGATCCGGGCCCGGATCCCTCCCTCGGTCCCGCCCAGCGGTAAGCGCACACCTCTCTC TCTCTCTGTAGATCCACATCTATCTACATCTATATATATATATATAGATATCCCCTTCCTGGGGCTTCCCTCCCT CCCTCCCCGGCTGATGTGCGGCAGCGCCCCTGCGGATGCAGCTCCTCTTCGTCGACCTATACCTCGACTGCGGCC CTCTGCTGCGGATCCCGCGCGCGACGGCACCGCGCCTCGTCGACGACGGCGTCCTGCCGCCGACGCCGGCGCAGC TGCACGCCGGCGCGGCCAAGCTAGGCGCGCTGCTGCGTACCGTGGCCGAGGCCGACGCGGCCGCGCTGCTGCACT ACACGCTCGACGACTGGGTGCGGCTGATCCTGAGCGTGACGCTGGCGCTGCGCCTGTCCTTCCCGCTGGCGCAGT GCCCGCTCTTCGACGCCGGCTGGGCCCGCGACCAGCTCGGCTTCGACCGCTTCCTGGCCGCCGTCTGCGCCGACG GGCCGGCCAAGGCGGCCGCCGTCGACGTCCTGTCCGCCAGCCGCGTCGTCCTCGGCGTCGTCCGCGACAAGTACC ACCGCCGCCTGCGCGCGCTGCACCAGCGCCTCGACCCGCCGCGCGACAAGAGCAACGGCTGCCCCATCTTCGACG GCGGCCTGGAGCCCTACTTCCCGCTGTGGGAGGCGGCCGACGACGCGCCGGCCCAGGCCCAGGCACCACCCCTGC CCGGAGGCTGGGTCGCCGCCGAACCGCTCGCCATGCCCGTCTTCCACGACCTGTGGGAGGCCATGACGATGGGCT GGGCCGGCCAGGAGGCCTGTCCGCAGCCGCGGTAG |