© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3388 |
| Gene name | |
| Location | Contig_188:29987..30809 |
| Strand | + |
| Gene length (bp) | 822 |
| Transcript length (bp) | 822 |
| Coding sequence length (bp) | 822 |
| Protein length (aa) | 274 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.3402 | 0.6265 | 0.1009 | 0.2212 | 0.3582 | 0.0236 | 0.1734 | 0.097 | 0.0491 | 0.1439 |
| Orthofinder run ID | 4 |
| Orthogroup | 2398 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3388 MDRRSISSDYPSESGGSPRLLSPASTVRSHRLTAADLGRFARGNDRLSYLRSSSSVGTEGWPDELRPPKRRSYNQ YELVDSSEILPCDSLSQRASPAPSDATPFACSPVRPTTYASTGTRDSLRFLKDQYDGPVDSHHRDSPGPAKLPPP PPPSPRPFKRRASQFSFHSLTRSLAKRPRLVGLRRWANGVYRGGGRRLSRAYHRWRQQRELERRQYDAWKANRRR ERPADALKGKPERGFGAFSLERSRHGHEEWWQEGVAKYQAPSWMLFQA* |
| Coding | >Hirsu2|3388 ATGGACCGACGCAGCATCTCCTCCGACTACCCGTCGGAAAGCGGCGGCTCGCCTCGGCTCCTGTCGCCCGCGTCG ACGGTGCGATCCCACCGACTGACGGCGGCGGACCTGGGCCGGTTCGCCCGCGGCAACGACCGACTGTCCTACCTG CGGTCCAGCTCGTCGGTCGGAACGGAGGGCTGGCCGGATGAGCTCCGGCCGCCCAAGCGTCGGTCGTACAACCAG TACGAGCTGGTCGACAGCTCCGAGATCCTGCCGTGCGATTCCCTGTCTCAGCGCGCGAGTCCCGCGCCGTCGGAT GCCACGCCTTTCGCCTGCAGCCCCGTCCGTCCGACGACGTATGCCTCGACGGGCACGCGCGACAGCCTCCGCTTC CTCAAGGACCAATACGACGGGCCCGTCGACTCGCACCACCGCGACAGCCCCGGCCCCGCGAAGCTGCCGCCGCCG CCGCCGCCGTCTCCTCGGCCTTTCAAGCGCCGGGCGTCGCAATTCTCCTTCCACAGCCTCACCCGCTCCCTGGCG AAGCGGCCGCGCCTGGTCGGCCTCCGCAGGTGGGCCAACGGCGTCTACCGCGGCGGCGGCCGTCGTCTGAGCCGA GCCTACCACCGCTGGAGGCAGCAGCGCGAGCTGGAGCGCCGCCAGTACGACGCCTGGAAGGCCAACCGGCGCAGG GAGCGGCCCGCGGACGCGCTCAAGGGAAAACCGGAACGAGGCTTCGGCGCCTTCTCGCTCGAGCGCAGCCGTCAC GGCCACGAGGAATGGTGGCAGGAGGGCGTCGCCAAATACCAGGCCCCCAGTTGGATGTTGTTCCAGGCGTGA |
| Transcript | >Hirsu2|3388 ATGGACCGACGCAGCATCTCCTCCGACTACCCGTCGGAAAGCGGCGGCTCGCCTCGGCTCCTGTCGCCCGCGTCG ACGGTGCGATCCCACCGACTGACGGCGGCGGACCTGGGCCGGTTCGCCCGCGGCAACGACCGACTGTCCTACCTG CGGTCCAGCTCGTCGGTCGGAACGGAGGGCTGGCCGGATGAGCTCCGGCCGCCCAAGCGTCGGTCGTACAACCAG TACGAGCTGGTCGACAGCTCCGAGATCCTGCCGTGCGATTCCCTGTCTCAGCGCGCGAGTCCCGCGCCGTCGGAT GCCACGCCTTTCGCCTGCAGCCCCGTCCGTCCGACGACGTATGCCTCGACGGGCACGCGCGACAGCCTCCGCTTC CTCAAGGACCAATACGACGGGCCCGTCGACTCGCACCACCGCGACAGCCCCGGCCCCGCGAAGCTGCCGCCGCCG CCGCCGCCGTCTCCTCGGCCTTTCAAGCGCCGGGCGTCGCAATTCTCCTTCCACAGCCTCACCCGCTCCCTGGCG AAGCGGCCGCGCCTGGTCGGCCTCCGCAGGTGGGCCAACGGCGTCTACCGCGGCGGCGGCCGTCGTCTGAGCCGA GCCTACCACCGCTGGAGGCAGCAGCGCGAGCTGGAGCGCCGCCAGTACGACGCCTGGAAGGCCAACCGGCGCAGG GAGCGGCCCGCGGACGCGCTCAAGGGAAAACCGGAACGAGGCTTCGGCGCCTTCTCGCTCGAGCGCAGCCGTCAC GGCCACGAGGAATGGTGGCAGGAGGGCGTCGCCAAATACCAGGCCCCCAGTTGGATGTTGTTCCAGGCGTGA |
| Gene | >Hirsu2|3388 ATGGACCGACGCAGCATCTCCTCCGACTACCCGTCGGAAAGCGGCGGCTCGCCTCGGCTCCTGTCGCCCGCGTCG ACGGTGCGATCCCACCGACTGACGGCGGCGGACCTGGGCCGGTTCGCCCGCGGCAACGACCGACTGTCCTACCTG CGGTCCAGCTCGTCGGTCGGAACGGAGGGCTGGCCGGATGAGCTCCGGCCGCCCAAGCGTCGGTCGTACAACCAG TACGAGCTGGTCGACAGCTCCGAGATCCTGCCGTGCGATTCCCTGTCTCAGCGCGCGAGTCCCGCGCCGTCGGAT GCCACGCCTTTCGCCTGCAGCCCCGTCCGTCCGACGACGTATGCCTCGACGGGCACGCGCGACAGCCTCCGCTTC CTCAAGGACCAATACGACGGGCCCGTCGACTCGCACCACCGCGACAGCCCCGGCCCCGCGAAGCTGCCGCCGCCG CCGCCGCCGTCTCCTCGGCCTTTCAAGCGCCGGGCGTCGCAATTCTCCTTCCACAGCCTCACCCGCTCCCTGGCG AAGCGGCCGCGCCTGGTCGGCCTCCGCAGGTGGGCCAACGGCGTCTACCGCGGCGGCGGCCGTCGTCTGAGCCGA GCCTACCACCGCTGGAGGCAGCAGCGCGAGCTGGAGCGCCGCCAGTACGACGCCTGGAAGGCCAACCGGCGCAGG GAGCGGCCCGCGGACGCGCTCAAGGGAAAACCGGAACGAGGCTTCGGCGCCTTCTCGCTCGAGCGCAGCCGTCAC GGCCACGAGGAATGGTGGCAGGAGGGCGTCGCCAAATACCAGGCCCCCAGTTGGATGTTGTTCCAGGCGTGA |