Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3384
Gene name
LocationContig_188:15849..16435
Strand-
Gene length (bp)586
Transcript length (bp)399
Coding sequence length (bp)399
Protein length (aa) 133

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.054 0.0458 0.9571 0.0934 0.0538 0.0077 0.0822 0.1342 0.0495 0.0027

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 15 37 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2396
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2684
Ophiocordyceps australis map64 (Brazil) OphauB2|3997
Ophiocordyceps camponoti-floridani Ophcf2|06982
Ophiocordyceps camponoti-rufipedis Ophun1|7261
Ophiocordyceps kimflemingae Ophio5|7250
Ophiocordyceps subramaniannii Hirsu2|3384 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3384
LKQQNQQQQSPPSTMHFNAIVAAAAAFVACSQAAAILPRNKHVADFRLYGLEDCNQKKNLGIWTVIDDDFKPNEC
KSLNDDSVKSVRNVDILGNCKLHVYTDAACHHGRKEIGAGQCQSSQHGYKAWSMKCH*
Coding >Hirsu2|3384
CTGAAGCAACAGAACCAGCAGCAGCAGAGCCCTCCATCGACGATGCACTTCAACGCCATCGTCGCAGCCGCTGCC
GCCTTCGTCGCCTGCTCTCAGGCTGCAGCCATTCTCCCGCGCAACAAGCACGTCGCCGACTTCCGCCTCTACGGC
TTGGAAGACTGCAACCAGAAGAAAAACCTGGGCATCTGGACTGTCATCGACGACGACTTCAAGCCCAACGAGTGC
AAGAGCCTCAACGACGATAGCGTCAAGTCCGTCAGGAATGTTGACATCCTCGGCAACTGCAAGCTGCACGTCTAC
ACCGATGCCGCCTGCCACCACGGTCGCAAGGAGATCGGCGCCGGCCAATGCCAAAGCTCCCAACACGGCTACAAG
GCCTGGTCGATGAAGTGCCACTGA
Transcript >Hirsu2|3384
CTGAAGCAACAGAACCAGCAGCAGCAGAGCCCTCCATCGACGATGCACTTCAACGCCATCGTCGCAGCCGCTGCC
GCCTTCGTCGCCTGCTCTCAGGCTGCAGCCATTCTCCCGCGCAACAAGCACGTCGCCGACTTCCGCCTCTACGGC
TTGGAAGACTGCAACCAGAAGAAAAACCTGGGCATCTGGACTGTCATCGACGACGACTTCAAGCCCAACGAGTGC
AAGAGCCTCAACGACGATAGCGTCAAGTCCGTCAGGAATGTTGACATCCTCGGCAACTGCAAGCTGCACGTCTAC
ACCGATGCCGCCTGCCACCACGGTCGCAAGGAGATCGGCGCCGGCCAATGCCAAAGCTCCCAACACGGCTACAAG
GCCTGGTCGATGAAGTGCCACTGA
Gene >Hirsu2|3384
CTGAAGCAACAGGTGAGCACCCCATCTGCTGACGCCTGTCAAGCTCCCCCGCTTCTTGGCCCTCTTCCACTGCGA
CTCTTCAGCTAACCTCGGGCCGGCATCAGAACCAGCAGCAGCAGAGCCCTCCATCGACGATGCACTTCAACGCCA
TCGTCGCAGCCGCTGCCGCCTTCGTCGCCTGCTCTCAGGCTGCAGCCATTCTCCCGCGCAACAAGCACGTCGCCG
ACTTCCGCCTCTACGGCTTGGAAGACTGCAACCAGAAGAAAAACCTGGGCATCTGGACTGTCATCGACGACGACT
TCAAGCCCAACGAGTGCAAGAGCCTCAACGACGATAGCGTCAAGTCCGTCAGGAATGTTGACATCCTCGGCAACT
GCAAGCGTGAGTCTTCTCACCCTGAGTCGTCCCGTCTGCGGCCCCGGGCCCTCGAGTAAAAAGTGAGCTTCCCAA
GCTGACCTGCCATCGTCATCCTCCAGTGCACGTCTACACCGATGCCGCCTGCCACCACGGTCGCAAGGAGATCGG
CGCCGGCCAATGCCAAAGCTCCCAACACGGCTACAAGGCCTGGTCGATGAAGTGCCACTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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