© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|3382 |
| Gene name | |
| Location | Contig_188:7617..9254 |
| Strand | - |
| Gene length (bp) | 1637 |
| Transcript length (bp) | 1467 |
| Coding sequence length (bp) | 1467 |
| Protein length (aa) | 489 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01933 | CofD | 2-phospho-L-lactate transferase CofD | 4.1E-66 | 29 | 423 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P53980|YNB1_YEAST | Uncharacterized protein YNL011C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNL011C PE=1 SV=1 | 27 | 435 | 2.0E-89 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0043743 | LPPG:FO 2-phospho-L-lactate transferase activity | Yes |
| GO:0016740 | transferase activity | No |
| GO:0016773 | phosphotransferase activity, alcohol group as acceptor | No |
| GO:0003824 | catalytic activity | No |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups | No |
| GO:0003674 | molecular_function | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.6327 | 0.2946 | 0.0316 | 0.1647 | 0.2486 | 0.0169 | 0.18 | 0.1119 | 0.0818 | 0.0286 |
| Orthofinder run ID | 4 |
| Orthogroup | 2395 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3382 MALSVAAAAAAARPTGRPATPNPDRSGLVVFSGGSAANSLVDVFERVRDANRASLSYVMPISDNGGSTSEIIRVF GGPGIGDVRSRLVRLIPDNGDAETMAIKHLFNHRLPGAPDEARAEWFDMLEARHALWQDISSPKRELVRSHLNSF NLEVVKRMRPSSRFDFSRASIGNLFLTGARLFTGSFEAAIYLLSSVCAVPGRVAVLPALNTNFAHHIAAGLEDGS VITGQNDISHPGAPTAAAVPGSVTPLGRDAAAAALAASDGTEEHDRIEDANPPGSLPALRRPAIEFCKEREEELP ARIDRIWYINPYGQEIRIPANPRVLDAINGADTVIYSIGSLFTSLIPNLVLKGVGEAVASPLIRNRILILNGTTD RETGPSANPFTGLDFVAAIANACADSRGVPRPSEDQYSLYVTHVLYIQGPGAPEVDRRRFSLLGIDTTRLYGPKD ELGKGGRYDPKALSQTLESIVGRKEVRQDRSRRNTLVG* |
| Coding | >Hirsu2|3382 ATGGCGCTGAGCGTCGCCGCCGCGGCCGCGGCCGCCCGTCCGACCGGCCGGCCCGCGACGCCGAATCCCGACCGC AGCGGCCTCGTCGTCTTCTCGGGCGGCAGCGCGGCCAACAGCCTGGTCGACGTCTTCGAGCGCGTGCGAGACGCC AACCGCGCCTCTCTCAGCTACGTGATGCCTATCTCGGACAACGGCGGGAGCACCAGCGAAATCATCCGCGTCTTT GGCGGGCCCGGCATCGGTGACGTGCGATCGCGACTCGTGCGCCTCATCCCCGACAACGGCGACGCGGAGACGATG GCCATCAAGCACCTCTTCAACCACCGCCTCCCCGGCGCGCCCGACGAGGCCAGGGCAGAGTGGTTCGACATGCTC GAGGCAAGGCACGCGCTGTGGCAGGACATCTCGTCGCCCAAGCGGGAGCTCGTGCGGTCGCACCTCAACAGCTTC AACCTCGAGGTCGTCAAGCGCATGCGGCCCAGCAGCCGCTTCGACTTCTCGCGCGCCAGCATCGGCAACCTCTTC CTCACCGGCGCCCGCCTCTTCACCGGCAGCTTCGAGGCCGCCATCTACCTGCTGAGCTCCGTCTGTGCCGTCCCG GGCCGGGTCGCCGTCCTGCCGGCCCTCAACACCAACTTCGCCCACCACATCGCCGCCGGGCTCGAGGACGGCTCC GTCATCACCGGCCAGAACGACATCTCCCACCCCGGCGCCCCCACCGCGGCCGCCGTGCCGGGCTCCGTCACGCCC CTCGGCCGAGACGCCGCCGCCGCCGCCCTCGCCGCCTCCGACGGCACCGAGGAGCACGACAGGATCGAAGACGCC AACCCGCCCGGCTCGCTGCCGGCGCTGAGGCGGCCCGCGATCGAGTTCTGCAAGGAGCGGGAGGAGGAGCTGCCG GCGCGCATCGACCGGATCTGGTACATCAACCCGTACGGGCAGGAGATCCGCATCCCGGCCAACCCGCGCGTCTTG GACGCCATCAACGGCGCCGATACCGTCATCTACAGCATCGGCTCCCTCTTTACCTCGCTCATCCCCAACCTCGTG CTGAAGGGCGTCGGCGAGGCCGTCGCCAGCCCCCTGATCCGCAACAGGATCCTCATCCTCAACGGCACGACGGAC CGCGAGACGGGTCCCTCGGCCAATCCCTTCACCGGGCTCGACTTTGTCGCCGCCATCGCCAACGCGTGTGCCGAC TCCAGGGGCGTCCCGCGGCCTTCCGAAGACCAGTATTCGCTGTATGTCACCCACGTTTTGTACATTCAAGGCCCT GGCGCACCCGAGGTCGACAGGCGGCGATTTTCCCTGCTAGGCATTGACACGACGCGGTTGTACGGACCGAAAGAC GAGCTGGGTAAGGGGGGGCGATACGACCCAAAGGCCCTGTCGCAGACGCTAGAATCCATCGTCGGGCGGAAAGAA GTGCGTCAGGACAGGAGCCGTCGCAATACTTTGGTTGGTTAG |
| Transcript | >Hirsu2|3382 ATGGCGCTGAGCGTCGCCGCCGCGGCCGCGGCCGCCCGTCCGACCGGCCGGCCCGCGACGCCGAATCCCGACCGC AGCGGCCTCGTCGTCTTCTCGGGCGGCAGCGCGGCCAACAGCCTGGTCGACGTCTTCGAGCGCGTGCGAGACGCC AACCGCGCCTCTCTCAGCTACGTGATGCCTATCTCGGACAACGGCGGGAGCACCAGCGAAATCATCCGCGTCTTT GGCGGGCCCGGCATCGGTGACGTGCGATCGCGACTCGTGCGCCTCATCCCCGACAACGGCGACGCGGAGACGATG GCCATCAAGCACCTCTTCAACCACCGCCTCCCCGGCGCGCCCGACGAGGCCAGGGCAGAGTGGTTCGACATGCTC GAGGCAAGGCACGCGCTGTGGCAGGACATCTCGTCGCCCAAGCGGGAGCTCGTGCGGTCGCACCTCAACAGCTTC AACCTCGAGGTCGTCAAGCGCATGCGGCCCAGCAGCCGCTTCGACTTCTCGCGCGCCAGCATCGGCAACCTCTTC CTCACCGGCGCCCGCCTCTTCACCGGCAGCTTCGAGGCCGCCATCTACCTGCTGAGCTCCGTCTGTGCCGTCCCG GGCCGGGTCGCCGTCCTGCCGGCCCTCAACACCAACTTCGCCCACCACATCGCCGCCGGGCTCGAGGACGGCTCC GTCATCACCGGCCAGAACGACATCTCCCACCCCGGCGCCCCCACCGCGGCCGCCGTGCCGGGCTCCGTCACGCCC CTCGGCCGAGACGCCGCCGCCGCCGCCCTCGCCGCCTCCGACGGCACCGAGGAGCACGACAGGATCGAAGACGCC AACCCGCCCGGCTCGCTGCCGGCGCTGAGGCGGCCCGCGATCGAGTTCTGCAAGGAGCGGGAGGAGGAGCTGCCG GCGCGCATCGACCGGATCTGGTACATCAACCCGTACGGGCAGGAGATCCGCATCCCGGCCAACCCGCGCGTCTTG GACGCCATCAACGGCGCCGATACCGTCATCTACAGCATCGGCTCCCTCTTTACCTCGCTCATCCCCAACCTCGTG CTGAAGGGCGTCGGCGAGGCCGTCGCCAGCCCCCTGATCCGCAACAGGATCCTCATCCTCAACGGCACGACGGAC CGCGAGACGGGTCCCTCGGCCAATCCCTTCACCGGGCTCGACTTTGTCGCCGCCATCGCCAACGCGTGTGCCGAC TCCAGGGGCGTCCCGCGGCCTTCCGAAGACCAGTATTCGCTGTATGTCACCCACGTTTTGTACATTCAAGGCCCT GGCGCACCCGAGGTCGACAGGCGGCGATTTTCCCTGCTAGGCATTGACACGACGCGGTTGTACGGACCGAAAGAC GAGCTGGGTAAGGGGGGGCGATACGACCCAAAGGCCCTGTCGCAGACGCTAGAATCCATCGTCGGGCGGAAAGAA GTGCGTCAGGACAGGAGCCGTCGCAATACTTTGGTTGGTTAG |
| Gene | >Hirsu2|3382 ATGGCGCTGAGCGTCGCCGCCGCGGCCGCGGCCGCCCGTCCGACCGGCCGGCCCGCGACGCCGAATCCCGACCGC AGCGGCCTCGTCGTCTTCTCGGGCGGCAGCGCGGCCAACAGCCTGGTCGACGTCTTCGAGCGCGTGCGAGACGCC AACCGCGCCTCTCTCAGCTACGTGATGCCTATCTCGGACAACGGCGGGAGCACCAGCGAAATCATCCGCGTCTTT GGCGGGCCCGGTACGTCCCTCTTCGCGGACACGGCCGGCCATCGGCTCCAAAACGAGGGCGTCGTGATACTGCAA ACGAGTTATCCCTTTGCACAAAAGAGATAGAGGAAGGGAGGGAGAGAGGGGAGAAAGGCAAGAAAAGCCAATCAG CTAATGGCGACTTCTTCATCATACATGCAGGCATCGGTGACGTGCGATCGCGACTCGTGCGCCTCATCCCCGACA ACGGCGACGCGGAGACGATGGCCATCAAGCACCTCTTCAACCACCGCCTCCCCGGCGCGCCCGACGAGGCCAGGG CAGAGTGGTTCGACATGCTCGAGGCAAGGCACGCGCTGTGGCAGGACATCTCGTCGCCCAAGCGGGAGCTCGTGC GGTCGCACCTCAACAGCTTCAACCTCGAGGTCGTCAAGCGCATGCGGCCCAGCAGCCGCTTCGACTTCTCGCGCG CCAGCATCGGCAACCTCTTCCTCACCGGCGCCCGCCTCTTCACCGGCAGCTTCGAGGCCGCCATCTACCTGCTGA GCTCCGTCTGTGCCGTCCCGGGCCGGGTCGCCGTCCTGCCGGCCCTCAACACCAACTTCGCCCACCACATCGCCG CCGGGCTCGAGGACGGCTCCGTCATCACCGGCCAGAACGACATCTCCCACCCCGGCGCCCCCACCGCGGCCGCCG TGCCGGGCTCCGTCACGCCCCTCGGCCGAGACGCCGCCGCCGCCGCCCTCGCCGCCTCCGACGGCACCGAGGAGC ACGACAGGATCGAAGACGCCAACCCGCCCGGCTCGCTGCCGGCGCTGAGGCGGCCCGCGATCGAGTTCTGCAAGG AGCGGGAGGAGGAGCTGCCGGCGCGCATCGACCGGATCTGGTACATCAACCCGTACGGGCAGGAGATCCGCATCC CGGCCAACCCGCGCGTCTTGGACGCCATCAACGGCGCCGATACCGTCATCTACAGCATCGGCTCCCTCTTTACCT CGCTCATCCCCAACCTCGTGCTGAAGGGCGTCGGCGAGGCCGTCGCCAGCCCCCTGATCCGCAACAGGATCCTCA TCCTCAACGGCACGACGGACCGCGAGACGGGTCCCTCGGCCAATCCCTTCACCGGGCTCGACTTTGTCGCCGCCA TCGCCAACGCGTGTGCCGACTCCAGGGGCGTCCCGCGGCCTTCCGAAGACCAGTATTCGCTGTATGTCACCCACG TTTTGTACATTCAAGGCCCTGGCGCACCCGAGGTCGACAGGCGGCGATTTTCCCTGCTAGGCATTGACACGACGC GGTTGTACGGACCGAAAGACGAGCTGGGTAAGGGGGGGCGATACGACCCAAAGGCCCTGTCGCAGACGCTAGAAT CCATCGTCGGGCGGAAAGAAGTGCGTCAGGACAGGAGCCGTCGCAATACTTTGGTTGGTTAG |