Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3381
Gene name
LocationContig_188:6882..7149
Strand+
Gene length (bp)267
Transcript length (bp)267
Coding sequence length (bp)267
Protein length (aa) 89

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide|Transmembrane domain 0.1578 0.12 0.4319 0.475 0.3209 0.1503 0.7268 0.5533 0.4516 0.0128

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 27 49 22
2 62 84 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2394
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2681
Ophiocordyceps australis map64 (Brazil) OphauB2|4000
Ophiocordyceps camponoti-floridani Ophcf2|06984
Ophiocordyceps camponoti-rufipedis Ophun1|7263
Ophiocordyceps kimflemingae Ophio5|7248
Ophiocordyceps subramaniannii Hirsu2|3381 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3381
MGANLSSTFVPDTSKVVLSEPDRNADIILAIIWVLVLYACAMIFSTCTLIDRWKGPTDKIRVGAGSVVGALVLST
AWPVVMLYLIFAN*
Coding >Hirsu2|3381
ATGGGTGCCAATCTCTCGTCGACCTTTGTCCCGGACACCTCCAAGGTCGTCCTCAGCGAGCCCGACAGGAACGCG
GACATCATTCTCGCCATCATCTGGGTGCTTGTCCTGTACGCATGCGCCATGATCTTCAGTACCTGCACCCTCATC
GACCGGTGGAAGGGCCCGACGGACAAGATACGGGTTGGGGCGGGGTCGGTGGTTGGGGCCCTAGTGCTGTCGACC
GCATGGCCTGTCGTCATGCTGTACCTCATCTTTGCCAACTGA
Transcript >Hirsu2|3381
ATGGGTGCCAATCTCTCGTCGACCTTTGTCCCGGACACCTCCAAGGTCGTCCTCAGCGAGCCCGACAGGAACGCG
GACATCATTCTCGCCATCATCTGGGTGCTTGTCCTGTACGCATGCGCCATGATCTTCAGTACCTGCACCCTCATC
GACCGGTGGAAGGGCCCGACGGACAAGATACGGGTTGGGGCGGGGTCGGTGGTTGGGGCCCTAGTGCTGTCGACC
GCATGGCCTGTCGTCATGCTGTACCTCATCTTTGCCAACTGA
Gene >Hirsu2|3381
ATGGGTGCCAATCTCTCGTCGACCTTTGTCCCGGACACCTCCAAGGTCGTCCTCAGCGAGCCCGACAGGAACGCG
GACATCATTCTCGCCATCATCTGGGTGCTTGTCCTGTACGCATGCGCCATGATCTTCAGTACCTGCACCCTCATC
GACCGGTGGAAGGGCCCGACGGACAAGATACGGGTTGGGGCGGGGTCGGTGGTTGGGGCCCTAGTGCTGTCGACC
GCATGGCCTGTCGTCATGCTGTACCTCATCTTTGCCAACTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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