© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3379 |
| Gene name | |
| Location | Contig_1879:2777..3477 |
| Strand | + |
| Gene length (bp) | 700 |
| Transcript length (bp) | 591 |
| Coding sequence length (bp) | 591 |
| Protein length (aa) | 197 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.5633 | 0.4882 | 0.0429 | 0.1432 | 0.2323 | 0.0125 | 0.0516 | 0.1155 | 0.0759 | 0.1083 |
| Orthofinder run ID | 4 |
| Orthogroup | 6 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3379 MEQDASLRQPNFSLAAESMRTVADQLERCGNLPAVDGGARLAETLQTVLERIDALERTIHHRIDTLERTIHHRID TLEKTVHHRIDVLESTMQRRFDEVEQRMTDLDRKMTFSNRNAIARAHNGTVERGDTPLQRPYSLLTGDLIDGFPS NMDQMDRLHGRDVDNLLRHLGESDEGSAAEKKRRLKLASGLIKRLL* |
| Coding | >Hirsu2|3379 ATGGAGCAAGATGCCTCCCTTCGACAGCCCAATTTTTCGCTCGCTGCGGAGAGCATGAGGACCGTCGCGGACCAG CTGGAGCGGTGCGGCAACCTGCCGGCCGTGGATGGCGGCGCTCGTTTGGCAGAGACCCTCCAGACGGTTTTGGAG CGCATCGATGCGCTTGAGAGGACAATCCACCATCGCATCGATACGCTTGAGAGGACAATCCACCATCGCATCGAT ACGCTTGAGAAGACAGTCCACCATCGCATCGATGTGCTGGAGAGCACGATGCAGCGTCGATTTGATGAAGTCGAA CAGCGCATGACCGACTTGGATAGGAAGATGACTTTTTCGAATCGGAACGCCATAGCGCGGGCGCACAACGGCACA GTTGAGCGGGGTGACACGCCATTACAACGTCCTTACAGTCTTCTGACGGGAGATCTGATCGACGGCTTCCCCTCC AACATGGATCAGATGGACAGACTGCACGGGCGAGACGTTGACAACCTGTTGCGCCATCTCGGGGAGTCGGACGAG GGTTCTGCGGCGGAGAAGAAGCGGAGGTTGAAGCTTGCTTCGGGTCTGATCAAGCGGCTATTGTGA |
| Transcript | >Hirsu2|3379 ATGGAGCAAGATGCCTCCCTTCGACAGCCCAATTTTTCGCTCGCTGCGGAGAGCATGAGGACCGTCGCGGACCAG CTGGAGCGGTGCGGCAACCTGCCGGCCGTGGATGGCGGCGCTCGTTTGGCAGAGACCCTCCAGACGGTTTTGGAG CGCATCGATGCGCTTGAGAGGACAATCCACCATCGCATCGATACGCTTGAGAGGACAATCCACCATCGCATCGAT ACGCTTGAGAAGACAGTCCACCATCGCATCGATGTGCTGGAGAGCACGATGCAGCGTCGATTTGATGAAGTCGAA CAGCGCATGACCGACTTGGATAGGAAGATGACTTTTTCGAATCGGAACGCCATAGCGCGGGCGCACAACGGCACA GTTGAGCGGGGTGACACGCCATTACAACGTCCTTACAGTCTTCTGACGGGAGATCTGATCGACGGCTTCCCCTCC AACATGGATCAGATGGACAGACTGCACGGGCGAGACGTTGACAACCTGTTGCGCCATCTCGGGGAGTCGGACGAG GGTTCTGCGGCGGAGAAGAAGCGGAGGTTGAAGCTTGCTTCGGGTCTGATCAAGCGGCTATTGTGA |
| Gene | >Hirsu2|3379 ATGGAGCAAGATGCCTCCCTTCGACAGCCCAATTTTTCGCTCGCTGCGGAGAGCATGAGGACCGTCGCGGACCAG CTGGAGCGGTGCGGCAACCTGCCGGCCGTGGATGGCGGCGCTCGTTTGGCAGAGACCCTCCAGACGGTTTTGGAG CGCATCGATGCGCTTGAGAGGACAATCCACCATCGCATCGATACGCTTGAGAGGACAATCCACCATCGCATCGAT ACGCTTGAGAAGACAGTCCACCATCGCATCGATGTGCTGGAGAGCACGATGCAGCGTCGATTTGATGAAGTCGAA CAGCGCATGACCGACTTGGATAGGAAGATGACTTTTTCGTGAGTGTTAAAAAAAAAACCCCCTCAACAAAACATC ACTAACTCCTGTAGGAATCGGAACGCCATAGCGCGGGCGCACAACGGCACAGTTGAGCGGGGTGACACGCCATTA CAACGTCCTTACAGTCTTCTGACGGGAGATCTGATCGACGGCTTCCCCTCCAACATGGATCAGATGGACAGACTG CACGGTGAGCGTTTGATGCTTCCAGCTCCTGAGATGCGAGGCTAATTATGGCCGAATAACAGGGCGAGACGTTGA CAACCTGTTGCGCCATCTCGGGGAGTCGGACGAGGGTTCTGCGGCGGAGAAGAAGCGGAGGTTGAAGCTTGCTTC GGGTCTGATCAAGCGGCTATTGTGA |