© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3374 |
| Gene name | |
| Location | Contig_1876:1135..3933 |
| Strand | + |
| Gene length (bp) | 2798 |
| Transcript length (bp) | 1176 |
| Coding sequence length (bp) | 1176 |
| Protein length (aa) | 392 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.6283 | 0.4534 | 0.4859 | 0.0789 | 0.1657 | 0.1764 | 0.166 | 0.1344 | 0.1744 | 0.0513 |
| Orthofinder run ID | 4 |
| Orthogroup | 9333 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|3374 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3374 MGGLGDDDKLDDSCACIVLLRLAVLARTSLADADAPRQLLSIDKAFSDSSRRGTTGRGPGRPRRTALSRAGSQVK RPVRLSRQWIQPLQPSPASVFRPPAQSQTRDWAPAAKPCISGSPSRERRRGGELPDRPRAALATLAGRRGPPASP VPEEETGRRVGSKASDKPAAKDEAPTWKQVRDSKCNAVASLSAASTAAAWQHNQAWQGQEGISFGCRLVGTDLGW AVWGDEDPAHGSVEGPPSIRLPLLLRLSLLSFAASSRFLAEPLSIVALTTTPPSPRTGSTAAIVSAAGRRDKGIA CGPREQTMALHGPPPFFKETLDDDDDEIAGRRRSYTTPAPTLVTRPSRPRFETVGISDQISPSRQAARGSRCSIS GQLRSISVGGQGTPDG* |
| Coding | >Hirsu2|3374 ATGGGCGGCCTCGGTGATGACGACAAGCTGGATGATTCATGCGCTTGCATCGTTTTGCTTCGCCTGGCCGTGTTG GCACGCACAAGCCTCGCCGACGCCGACGCCCCTCGACAGCTTCTCAGCATCGACAAAGCCTTCTCCGACTCCAGC CGCCGGGGAACAACAGGGCGAGGCCCCGGCCGTCCGCGGAGGACGGCTCTCTCCCGTGCCGGCAGCCAGGTGAAA CGGCCGGTCAGGCTGAGCCGGCAGTGGATCCAGCCGTTGCAGCCGTCTCCCGCATCCGTATTCCGCCCGCCAGCG CAATCCCAGACACGGGATTGGGCCCCAGCAGCCAAGCCATGCATTTCCGGCTCCCCTAGCCGGGAGCGAAGGAGA GGTGGCGAGCTGCCGGATCGCCCTCGAGCCGCGCTCGCAACCTTGGCTGGCCGACGCGGCCCCCCTGCCAGTCCG GTTCCTGAGGAGGAGACAGGCAGACGGGTAGGGAGCAAAGCGAGCGACAAGCCGGCTGCGAAGGATGAGGCGCCA ACATGGAAGCAGGTAAGAGATAGCAAGTGTAACGCCGTTGCATCGCTCTCCGCCGCGAGCACCGCCGCCGCTTGG CAGCACAATCAGGCCTGGCAGGGACAAGAAGGAATCTCGTTTGGCTGCCGTTTGGTCGGCACGGACCTCGGCTGG GCTGTCTGGGGGGACGAGGACCCTGCGCACGGGTCGGTCGAGGGGCCGCCGAGCATCCGTCTTCCTCTCCTTCTC CGTCTGTCTCTTCTCTCGTTCGCTGCCTCTTCTCGCTTTCTGGCGGAGCCTCTCTCCATCGTCGCTCTCACCACC ACTCCTCCGTCACCACGGACCGGCTCGACCGCTGCCATCGTGAGCGCAGCCGGCCGCCGCGACAAAGGCATCGCC TGCGGGCCCCGCGAGCAAACAATGGCGCTGCACGGGCCGCCCCCGTTCTTCAAAGAAACATTGGACGACGACGAC GACGAGATTGCAGGCCGCCGCCGATCCTACACCACTCCGGCCCCGACGCTCGTCACCCGCCCGAGTCGGCCACGT TTCGAAACGGTCGGTATATCCGACCAAATCTCTCCATCGAGACAGGCCGCCCGGGGAAGCAGATGCAGCATCTCC GGTCAGCTCAGGTCAATCTCGGTGGGCGGGCAGGGCACGCCTGATGGCTGA |
| Transcript | >Hirsu2|3374 ATGGGCGGCCTCGGTGATGACGACAAGCTGGATGATTCATGCGCTTGCATCGTTTTGCTTCGCCTGGCCGTGTTG GCACGCACAAGCCTCGCCGACGCCGACGCCCCTCGACAGCTTCTCAGCATCGACAAAGCCTTCTCCGACTCCAGC CGCCGGGGAACAACAGGGCGAGGCCCCGGCCGTCCGCGGAGGACGGCTCTCTCCCGTGCCGGCAGCCAGGTGAAA CGGCCGGTCAGGCTGAGCCGGCAGTGGATCCAGCCGTTGCAGCCGTCTCCCGCATCCGTATTCCGCCCGCCAGCG CAATCCCAGACACGGGATTGGGCCCCAGCAGCCAAGCCATGCATTTCCGGCTCCCCTAGCCGGGAGCGAAGGAGA GGTGGCGAGCTGCCGGATCGCCCTCGAGCCGCGCTCGCAACCTTGGCTGGCCGACGCGGCCCCCCTGCCAGTCCG GTTCCTGAGGAGGAGACAGGCAGACGGGTAGGGAGCAAAGCGAGCGACAAGCCGGCTGCGAAGGATGAGGCGCCA ACATGGAAGCAGGTAAGAGATAGCAAGTGTAACGCCGTTGCATCGCTCTCCGCCGCGAGCACCGCCGCCGCTTGG CAGCACAATCAGGCCTGGCAGGGACAAGAAGGAATCTCGTTTGGCTGCCGTTTGGTCGGCACGGACCTCGGCTGG GCTGTCTGGGGGGACGAGGACCCTGCGCACGGGTCGGTCGAGGGGCCGCCGAGCATCCGTCTTCCTCTCCTTCTC CGTCTGTCTCTTCTCTCGTTCGCTGCCTCTTCTCGCTTTCTGGCGGAGCCTCTCTCCATCGTCGCTCTCACCACC ACTCCTCCGTCACCACGGACCGGCTCGACCGCTGCCATCGTGAGCGCAGCCGGCCGCCGCGACAAAGGCATCGCC TGCGGGCCCCGCGAGCAAACAATGGCGCTGCACGGGCCGCCCCCGTTCTTCAAAGAAACATTGGACGACGACGAC GACGAGATTGCAGGCCGCCGCCGATCCTACACCACTCCGGCCCCGACGCTCGTCACCCGCCCGAGTCGGCCACGT TTCGAAACGGTCGGTATATCCGACCAAATCTCTCCATCGAGACAGGCCGCCCGGGGAAGCAGATGCAGCATCTCC GGTCAGCTCAGGTCAATCTCGGTGGGCGGGCAGGGCACGCCTGATGGCTGA |
| Gene | >Hirsu2|3374 ATGGGCGGCCTCGGTGATGACGACAAGCTGGATGATTCATGCGCTTGCATCGTTTTGCTTCGCCTGGCCGTGTTG GCACGCACAAGCCTCGCCGACGCCGACGCCCCTCGACAGCTTCTCAGCATCGACAAAGCCTTCTCCGACTCCAGC CGCCGGGGAACAACAGGGCGAGGCCCCGGCCGTCCGCGGAGGACGGCTCTCTCCCGTGCCGGCAGCCAGGTGAAA CGGCCGGTCAGGCTGAGCCGGCAGTGTAAGCGGCGCTGGGCCTTGCCACCTCGGATGGCTCCGGCCCTCCTGGCG GTCCGATGCATCGTCCCCCCCCCCCTCTCGGGCCGGTGAAAGGCTGAAGGAAAAGGGGAAGGGGGGCGTGTGTGA GAGCAGCTGGAGACGCTCTGGGAAACCGGGCAATGGCACGGTGACGGTGTGCCGGGTGCTTGCTTGGGGCTCAGC AGGACATGACATCTGGCGATGCCGGGCATGGGTGACGTCTGTTATTTTTTTTCCTTCGCCACGGATAGGCTTAAA TTATCAATCGGTGCCCAAAGCCAGGGATCCAGCCGTTGCAGCCGTCTCCCGCATCCGTATTCCGCCCGCCAGCGC AATCCCAGACACGGGATTGGGCCCCAGCAGCCAAGCCATGCATTTCCGGCTCCCCTAGCCGGGAGCGAAGGAGAG GTGGCGAGCTGCCGGATCGCCCTCGAGCCGCGCTCGCAACCTTGGCTGGCCGACGCGGCCCCCCTGCCAGTCCGG TTCCTGAGGAGGAGACAGGCAGACGGGTAGGGAGCAAAGCGAGCGACAAGCCGGCTGCGAAGGATGAGGCGCCAA CATGGAAGCAGGTAAGAGATAGCAAGTGTAACGCCGTTGCATCGCTCTCCGCCGCGAGCACCGCCGCCGCTTGGC AGCACAATCAGGCCTGGCAGGGACAAGAAGGTAAAAAATGTTTAAATGAAAAAAGAATAGGGGGGGCTCGTCGAA GGTTTCCAGAAAGCGGCCGAGTCTGCGGGAGTCGCTGTCGTGCGACGCGATGACGTCGGAAGAAGGGATCCAATC CCTCGCGAGCTGAACCGCGGCAGAGCGTGGCATGGGCTGGAGTCGTCGGAAGAGTCGGGGACTGGGCGAGCGGCC GTCCGTCAACGCAGCCGCTACCGCAGTTGGAGTCGTGCCCGGGCGCCTTTGCAGGGAGCATCATCATCCGGACAG GGGGACATTGGCCCGCTGCAGAAGAGGGGAGTAAGACTGGGGGGGGGGGCGGTTGAGTGCTGCCTGAGGCTCCCC TTACTGCACGTCCCCGGCGGGCAGCTTGGGGTTTCTCTCGGACCGCAGCTGATTCCGGCTCTGGATCGTCTTGTT ATTTTTAACAATGCGACGCGGGCGCACGACGGCAAACAAACAAAGGGAGCGGCCCTTGCCGAAGAACGGGCCTCG CTCCTCCACCGAGGGCGGAGGAGAGACCGGGCCGACAGCAGGCCGACCGAGGGCCCCGTCCGTGCGGCCGGTTTC CCATCCGTGCTTCGACGAGGCCGGCCAACCGCGCCGGCGCCCGTTTGTTGAATAGAAAAACAGCAGGCCGTCCAG GGCAACAGGCAGCCGGCAGACAAAGAGCGACGGCGACGGGAACCGCTGCCGCTGCCGCCCCAACCGACGGCCACC AAAGGAAGAAAAGCGGCGCTGGGCCCGGCTCCATCGCCGTCGGTAGTTGCGCCGCCTCGATCGCTGCCCCCTGCC GGCTCCATCCGCCGAGGTCCGCGTCGACCAGATGGATTCGCTCGCCTCTATTGTCCTGTACGCATGGATGTACAT ACATACATGCCTCCATATTTTTCCATGGCCATCTCCGGCCGCATGGTCCCGTCGCTTAGCAGACTCGCGCCCCCC GCCCGCCGCGCGCTCGCGAGCCGCCCACCTGCGACGGCCTCGAAACTCCAGCCAGACCAGAGCGAAAAAGAAGGG ATTGTTGAGGAGCGACGAGGTCATGGCTCGGACCGGCATCGTCCCTGCCCGCCCCCGCCCGCGCACGGGGGGGGA CGGGGGGGGGAGGCGGGCGGATGTAGTCGTCCGGAAGCGCGAGCCGGGCCCGTGAGGCTCAAACGCCGCACAATG ATCAAACGGGTGTGAGGCGCCAAAATAAAAATTAAAAAAAAATTAACGGGCCATGCAATGCGACGCCGCGAGGCA ATGCGACGTGTGGGCGTGAAACTCGCCTCGAGGCCGCGCCGGGCGGCTCTGCGGACGAGGACGGACGACGGCCCT GAGGAATCTCGTTTGGCTGCCGTTTGGTCGGCACGGACCTCGGCTGGGCTGTCTGGGGGGACGAGGACCCTGCGC ACGGGTCGGTCGAGGGGCCGCCGAGCATCCGTCTTCCTCTCCTTCTCCGTCTGTCTCTTCTCTCGTTCGCTGCCT CTTCTCGCTTTCTGGCGGAGCCTCTCTCCATCGTCGCTCTCACCACCACTCCTCCGTCACCACGGACCGGCTCGA CCGCTGCCATCGTGAGCGCAGCCGGCCGCCGCGACAAAGGCATCGCCTGCGGGCCCCGCGAGCAAACAATGGCGC TGCACGGGCCGCCCCCGTTCTTCAAAGAAACATTGGACGACGACGACGACGAGATTGCAGGCCGCCGCCGATCCT ACACCACTCCGGCCCCGACGCTCGTCACCCGCCCGAGTCGGCCACGTTTCGAAACGGTCGGTATATCCGACCAAA TCTCTCCATCGAGACAGGCCGCCCGGGGAAGCAGATGCAGCATCTCCGGTCAGCTCAGGTCAATCTCGGTGGGCG GGCAGGGCACGCCTGATGGCTGA |