Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3371
Gene name
LocationContig_1874:1035..1610
Strand-
Gene length (bp)575
Transcript length (bp)381
Coding sequence length (bp)381
Protein length (aa) 127

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0766 0.0464 0.9468 0.1546 0.0778 0.0126 0.1179 0.1432 0.1188 0.0018

SignalP

SignalP signal predicted Location Score
Yes 1 - 19 0.999763

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2390
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1437
Ophiocordyceps australis map64 (Brazil) OphauB2|6037
Ophiocordyceps camponoti-floridani Ophcf2|03791
Ophiocordyceps camponoti-rufipedis Ophun1|6621
Ophiocordyceps kimflemingae Ophio5|5007
Ophiocordyceps subramaniannii Hirsu2|3371 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3371
MVSSSALLALVAALAGAAAATKPKPDCRKVCYDGFNKCGQPFGICYNPCRETPPPPPPCTSTSKPTPTPTPTPVD
DCRTRTVCIDMINSCGMMYGTCVADCKPWPTLTPPPCPSSTFATVTSKPTY*
Coding >Hirsu2|3371
ATGGTTTCCTCGTCCGCGCTGCTCGCCCTCGTCGCTGCCTTGGCCGGCGCCGCGGCCGCGACCAAGCCCAAGCCC
GACTGCCGCAAGGTCTGCTACGACGGCTTCAACAAGTGCGGCCAGCCCTTTGGCATCTGCTACAACCCCTGCCGC
GAGACGCCGCCGCCGCCGCCGCCGTGCACCAGCACGAGCAAGCCGACGCCGACCCCGACCCCGACGCCGGTCGAC
GACTGCCGCACCCGCACCGTCTGCATCGACATGATCAACAGCTGCGGCATGATGTACGGAACCTGCGTCGCCGAC
TGCAAGCCTTGGCCGACCCTGACGCCGCCTCCGTGTCCGTCGTCGACCTTTGCGACCGTCACGTCCAAGCCGACC
TACTGA
Transcript >Hirsu2|3371
ATGGTTTCCTCGTCCGCGCTGCTCGCCCTCGTCGCTGCCTTGGCCGGCGCCGCGGCCGCGACCAAGCCCAAGCCC
GACTGCCGCAAGGTCTGCTACGACGGCTTCAACAAGTGCGGCCAGCCCTTTGGCATCTGCTACAACCCCTGCCGC
GAGACGCCGCCGCCGCCGCCGCCGTGCACCAGCACGAGCAAGCCGACGCCGACCCCGACCCCGACGCCGGTCGAC
GACTGCCGCACCCGCACCGTCTGCATCGACATGATCAACAGCTGCGGCATGATGTACGGAACCTGCGTCGCCGAC
TGCAAGCCTTGGCCGACCCTGACGCCGCCTCCGTGTCCGTCGTCGACCTTTGCGACCGTCACGTCCAAGCCGACC
TACTGA
Gene >Hirsu2|3371
ATGGTTTCCTCGTCCGCGCTGCTCGCCCTCGTCGCTGCCTTGGCCGGCGCCGCGGCCGCGACCAAGCCCAAGCCC
GACTGCCGCAAGGTCTGCTACGACGGCTTCAACAAGTGCGGCCAGCCCTTTGGCATGTAAGCAGCCTCGACCGCG
TCTCCGTTCGGCCCTCCCGAGCCTCGCGAGAGACAAGAACTCACGGCCGCCCTCGCCAGCTGCTACAACCCCTGC
CGCGAGACGCCGCCGCCGCCGCCGCCGTGCACCAGCACGAGCAAGCCGACGCCGACCCCGACCCCGACGCCGGTC
GACGACTGCCGCACCCGCACCGTCTGCATCGACATGATCAACAGCTGCGGCATGATGTACGGAACGTGAGTGACG
ACCCTGACCTGTTGTTCTTTTTTTGAATCTTGCGCCTGCTGGCACCGGCGCCGCCAAACCGTTTCAAGACAACCA
TGTTCGAATCGCTGACGGCTTGTTGCTGCAGCTGCGTCGCCGACTGCAAGCCTTGGCCGACCCTGACGCCGCCTC
CGTGTCCGTCGTCGACCTTTGCGACCGTCACGTCCAAGCCGACCTACTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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