Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3370
Gene name
LocationContig_1874:9..788
Strand+
Gene length (bp)779
Transcript length (bp)654
Coding sequence length (bp)654
Protein length (aa) 218

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.592 0.5354 0.1389 0.0582 0.1563 0.0316 0.1614 0.0717 0.1187 0.0435

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1351
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|03813
Ophiocordyceps camponoti-rufipedis Ophun1|5825
Ophiocordyceps subramaniannii Hirsu2|10756
Ophiocordyceps subramaniannii Hirsu2|2981
Ophiocordyceps subramaniannii Hirsu2|3370 (this protein)
Ophiocordyceps subramaniannii Hirsu2|3900
Ophiocordyceps subramaniannii Hirsu2|862

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3370
MAALRGRVAAGLPCASIDRLEVRLELSGGWGEGTYDAVLVGFDPGLDALETGELRGDEVDAKLLRLGNGPSAGAR
ISKPVDLAKYLGSDIVALQDVNYIGVFDDSCPLGVCGDGWGLKGIELKGRCAGSSAEVEVSKYQAVDVELQHSDR
NKPALIPDLVQAIPLFPKPRPLGYSSAELVWQHNITIDDWHEVGGSAEEHDGIEEAGKTRDELRDLD*
Coding >Hirsu2|3370
ATGGCCGCCCTGCGCGGCCGCGTGGCCGCCGGCCTGCCCTGCGCCTCCATCGACCGGCTCGAGGTCCGGCTGGAG
CTGTCCGGCGGCTGGGGGGAGGGCACGTACGACGCGGTCCTCGTCGGCTTCGACCCGGGCCTGGACGCGCTTGAG
ACGGGCGAGCTGCGCGGCGACGAGGTGGACGCGAAGCTCCTGCGGCTTGGCAACGGCCCCTCTGCCGGAGCCCGC
ATCAGCAAACCCGTCGACCTTGCTAAATACTTGGGGTCGGATATCGTCGCCCTCCAAGATGTGAACTACATCGGT
GTTTTCGACGACAGCTGCCCTCTGGGAGTCTGCGGAGATGGATGGGGTCTTAAGGGCATCGAGTTGAAGGGCCGA
TGCGCCGGCTCGTCCGCCGAAGTCGAGGTCAGCAAGTATCAAGCCGTCGACGTAGAGCTGCAACACTCGGACAGA
AACAAGCCAGCGTTGATTCCAGACCTCGTCCAGGCCATCCCCCTGTTTCCCAAGCCTCGGCCGCTCGGGTACTCG
AGTGCTGAGCTCGTCTGGCAGCACAACATCACCATCGACGACTGGCACGAGGTTGGGGGCTCGGCCGAGGAACAT
GACGGCATAGAAGAGGCCGGCAAGACGAGGGACGAGCTGCGTGACCTCGATTGA
Transcript >Hirsu2|3370
ATGGCCGCCCTGCGCGGCCGCGTGGCCGCCGGCCTGCCCTGCGCCTCCATCGACCGGCTCGAGGTCCGGCTGGAG
CTGTCCGGCGGCTGGGGGGAGGGCACGTACGACGCGGTCCTCGTCGGCTTCGACCCGGGCCTGGACGCGCTTGAG
ACGGGCGAGCTGCGCGGCGACGAGGTGGACGCGAAGCTCCTGCGGCTTGGCAACGGCCCCTCTGCCGGAGCCCGC
ATCAGCAAACCCGTCGACCTTGCTAAATACTTGGGGTCGGATATCGTCGCCCTCCAAGATGTGAACTACATCGGT
GTTTTCGACGACAGCTGCCCTCTGGGAGTCTGCGGAGATGGATGGGGTCTTAAGGGCATCGAGTTGAAGGGCCGA
TGCGCCGGCTCGTCCGCCGAAGTCGAGGTCAGCAAGTATCAAGCCGTCGACGTAGAGCTGCAACACTCGGACAGA
AACAAGCCAGCGTTGATTCCAGACCTCGTCCAGGCCATCCCCCTGTTTCCCAAGCCTCGGCCGCTCGGGTACTCG
AGTGCTGAGCTCGTCTGGCAGCACAACATCACCATCGACGACTGGCACGAGGTTGGGGGCTCGGCCGAGGAACAT
GACGGCATAGAAGAGGCCGGCAAGACGAGGGACGAGCTGCGTGACCTCGATTGA
Gene >Hirsu2|3370
ATGGCCGCCCTGCGCGGCCGCGTGGCCGCCGGCCTGCCCTGCGCCTCCATCGACCGGCTCGAGGTCCGGCTGGAG
CTGTCCGGCGGCTGGGGGGAGGGCACGTACGACGCGGTCCTCGTCGGCTTCGACCCGGGCCTGGACGCGCTTGAG
ACGGGCGAGCTGCGCGGCGACGAGGTGGACGCGAAGCTCCTGCGGCTTGGCAACGGCCCCTCTGCCGGAGCCCGC
ATCAGCAAACCCGTCGACCTTGCTAAATACTTGGGGTCGGATATCGTCGCCCTCCAAGATGTGAACTACATCGGT
GTTTTCGACGACAGCTGCCCTCTGGGAGTCTGCGGAGATGGATGGGGTCTTAAGGGTACGTTTGCGTAGTTGACT
CTCCTATACCCCTTCCTCCTCCTCTCCCTTACTCTCCTCCTTGTTGGCCTCTTTTTTTTTCGCGCCGCGGCATCG
CGCCCTCACAGCACGTGTCTCGAAATCTAGGCATCGAGTTGAAGGGCCGATGCGCCGGCTCGTCCGCCGAAGTCG
AGGTCAGCAAGTATCAAGCCGTCGACGTAGAGCTGCAACACTCGGACAGAAACAAGCCAGCGTTGATTCCAGACC
TCGTCCAGGCCATCCCCCTGTTTCCCAAGCCTCGGCCGCTCGGGTACTCGAGTGCTGAGCTCGTCTGGCAGCACA
ACATCACCATCGACGACTGGCACGAGGTTGGGGGCTCGGCCGAGGAACATGACGGCATAGAAGAGGCCGGCAAGA
CGAGGGACGAGCTGCGTGACCTCGATTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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