Protein ID | Hirsu2|3370 |
Gene name | |
Location | Contig_1874:9..788 |
Strand | + |
Gene length (bp) | 779 |
Transcript length (bp) | 654 |
Coding sequence length (bp) | 654 |
Protein length (aa) | 218 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Nucleus | 0.592 | 0.5354 | 0.1389 | 0.0582 | 0.1563 | 0.0316 | 0.1614 | 0.0717 | 0.1187 | 0.0435 |
Orthofinder run ID | 4 |
Orthogroup | 1351 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3370 MAALRGRVAAGLPCASIDRLEVRLELSGGWGEGTYDAVLVGFDPGLDALETGELRGDEVDAKLLRLGNGPSAGAR ISKPVDLAKYLGSDIVALQDVNYIGVFDDSCPLGVCGDGWGLKGIELKGRCAGSSAEVEVSKYQAVDVELQHSDR NKPALIPDLVQAIPLFPKPRPLGYSSAELVWQHNITIDDWHEVGGSAEEHDGIEEAGKTRDELRDLD* |
Coding | >Hirsu2|3370 ATGGCCGCCCTGCGCGGCCGCGTGGCCGCCGGCCTGCCCTGCGCCTCCATCGACCGGCTCGAGGTCCGGCTGGAG CTGTCCGGCGGCTGGGGGGAGGGCACGTACGACGCGGTCCTCGTCGGCTTCGACCCGGGCCTGGACGCGCTTGAG ACGGGCGAGCTGCGCGGCGACGAGGTGGACGCGAAGCTCCTGCGGCTTGGCAACGGCCCCTCTGCCGGAGCCCGC ATCAGCAAACCCGTCGACCTTGCTAAATACTTGGGGTCGGATATCGTCGCCCTCCAAGATGTGAACTACATCGGT GTTTTCGACGACAGCTGCCCTCTGGGAGTCTGCGGAGATGGATGGGGTCTTAAGGGCATCGAGTTGAAGGGCCGA TGCGCCGGCTCGTCCGCCGAAGTCGAGGTCAGCAAGTATCAAGCCGTCGACGTAGAGCTGCAACACTCGGACAGA AACAAGCCAGCGTTGATTCCAGACCTCGTCCAGGCCATCCCCCTGTTTCCCAAGCCTCGGCCGCTCGGGTACTCG AGTGCTGAGCTCGTCTGGCAGCACAACATCACCATCGACGACTGGCACGAGGTTGGGGGCTCGGCCGAGGAACAT GACGGCATAGAAGAGGCCGGCAAGACGAGGGACGAGCTGCGTGACCTCGATTGA |
Transcript | >Hirsu2|3370 ATGGCCGCCCTGCGCGGCCGCGTGGCCGCCGGCCTGCCCTGCGCCTCCATCGACCGGCTCGAGGTCCGGCTGGAG CTGTCCGGCGGCTGGGGGGAGGGCACGTACGACGCGGTCCTCGTCGGCTTCGACCCGGGCCTGGACGCGCTTGAG ACGGGCGAGCTGCGCGGCGACGAGGTGGACGCGAAGCTCCTGCGGCTTGGCAACGGCCCCTCTGCCGGAGCCCGC ATCAGCAAACCCGTCGACCTTGCTAAATACTTGGGGTCGGATATCGTCGCCCTCCAAGATGTGAACTACATCGGT GTTTTCGACGACAGCTGCCCTCTGGGAGTCTGCGGAGATGGATGGGGTCTTAAGGGCATCGAGTTGAAGGGCCGA TGCGCCGGCTCGTCCGCCGAAGTCGAGGTCAGCAAGTATCAAGCCGTCGACGTAGAGCTGCAACACTCGGACAGA AACAAGCCAGCGTTGATTCCAGACCTCGTCCAGGCCATCCCCCTGTTTCCCAAGCCTCGGCCGCTCGGGTACTCG AGTGCTGAGCTCGTCTGGCAGCACAACATCACCATCGACGACTGGCACGAGGTTGGGGGCTCGGCCGAGGAACAT GACGGCATAGAAGAGGCCGGCAAGACGAGGGACGAGCTGCGTGACCTCGATTGA |
Gene | >Hirsu2|3370 ATGGCCGCCCTGCGCGGCCGCGTGGCCGCCGGCCTGCCCTGCGCCTCCATCGACCGGCTCGAGGTCCGGCTGGAG CTGTCCGGCGGCTGGGGGGAGGGCACGTACGACGCGGTCCTCGTCGGCTTCGACCCGGGCCTGGACGCGCTTGAG ACGGGCGAGCTGCGCGGCGACGAGGTGGACGCGAAGCTCCTGCGGCTTGGCAACGGCCCCTCTGCCGGAGCCCGC ATCAGCAAACCCGTCGACCTTGCTAAATACTTGGGGTCGGATATCGTCGCCCTCCAAGATGTGAACTACATCGGT GTTTTCGACGACAGCTGCCCTCTGGGAGTCTGCGGAGATGGATGGGGTCTTAAGGGTACGTTTGCGTAGTTGACT CTCCTATACCCCTTCCTCCTCCTCTCCCTTACTCTCCTCCTTGTTGGCCTCTTTTTTTTTCGCGCCGCGGCATCG CGCCCTCACAGCACGTGTCTCGAAATCTAGGCATCGAGTTGAAGGGCCGATGCGCCGGCTCGTCCGCCGAAGTCG AGGTCAGCAAGTATCAAGCCGTCGACGTAGAGCTGCAACACTCGGACAGAAACAAGCCAGCGTTGATTCCAGACC TCGTCCAGGCCATCCCCCTGTTTCCCAAGCCTCGGCCGCTCGGGTACTCGAGTGCTGAGCTCGTCTGGCAGCACA ACATCACCATCGACGACTGGCACGAGGTTGGGGGCTCGGCCGAGGAACATGACGGCATAGAAGAGGCCGGCAAGA CGAGGGACGAGCTGCGTGACCTCGATTGA |