© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3364 |
| Gene name | |
| Location | Contig_187:28281..28893 |
| Strand | - |
| Gene length (bp) | 612 |
| Transcript length (bp) | 612 |
| Coding sequence length (bp) | 612 |
| Protein length (aa) | 204 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.6119 | 0.5448 | 0.1065 | 0.1151 | 0.1506 | 0.0193 | 0.1229 | 0.2025 | 0.1889 | 0.0483 |
| Orthofinder run ID | 4 |
| Orthogroup | 6598 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps australis 1348a (Ghana) | OphauG2|6181 |
| Ophiocordyceps australis map64 (Brazil) | OphauB2|4983 |
| Ophiocordyceps subramaniannii | Hirsu2|3364 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3364 MTLEGWEGFVAVEEFPGIWALYFDRDDDGLVGKVPMGTRVLEVELTRREKKESKAARETAASQPQAFVSSQDAEK SESVPETFNNQDEKLIPLEHENQTAPRTTASFDIHETAQEPWGSRVMSGSDDGTSRAVENSIDGDIPYSPSAVDN RSVWSAAGRNGSEADNVTVATTFSELDEMITEAAAGYRRGALYKAPYVEDGGG* |
| Coding | >Hirsu2|3364 ATGACGCTGGAAGGCTGGGAGGGATTCGTCGCCGTGGAAGAGTTCCCCGGAATCTGGGCCCTGTACTTCGACCGG GACGACGATGGCCTTGTGGGCAAGGTACCCATGGGGACGCGGGTGTTGGAGGTTGAGCTCACAAGGAGAGAAAAG AAGGAGTCCAAGGCTGCCCGTGAAACCGCCGCGAGCCAACCCCAGGCATTCGTCTCGAGTCAAGATGCCGAGAAG AGCGAATCGGTCCCAGAAACCTTTAACAACCAGGACGAGAAACTAATACCTCTCGAGCACGAGAACCAGACCGCG CCGCGAACAACGGCCTCATTCGACATCCACGAGACCGCTCAAGAGCCGTGGGGCTCACGCGTCATGTCTGGCAGC GATGATGGCACCTCGAGAGCAGTGGAAAACAGCATCGACGGGGATATCCCTTACTCGCCCAGCGCCGTCGATAAC CGATCTGTCTGGTCAGCCGCAGGGAGAAACGGCAGCGAGGCCGACAACGTCACAGTTGCCACCACCTTTTCCGAG CTGGACGAGATGATCACCGAAGCTGCGGCTGGGTATAGAAGGGGGGCACTCTACAAGGCGCCGTATGTTGAAGAT GGAGGAGGGTAG |
| Transcript | >Hirsu2|3364 ATGACGCTGGAAGGCTGGGAGGGATTCGTCGCCGTGGAAGAGTTCCCCGGAATCTGGGCCCTGTACTTCGACCGG GACGACGATGGCCTTGTGGGCAAGGTACCCATGGGGACGCGGGTGTTGGAGGTTGAGCTCACAAGGAGAGAAAAG AAGGAGTCCAAGGCTGCCCGTGAAACCGCCGCGAGCCAACCCCAGGCATTCGTCTCGAGTCAAGATGCCGAGAAG AGCGAATCGGTCCCAGAAACCTTTAACAACCAGGACGAGAAACTAATACCTCTCGAGCACGAGAACCAGACCGCG CCGCGAACAACGGCCTCATTCGACATCCACGAGACCGCTCAAGAGCCGTGGGGCTCACGCGTCATGTCTGGCAGC GATGATGGCACCTCGAGAGCAGTGGAAAACAGCATCGACGGGGATATCCCTTACTCGCCCAGCGCCGTCGATAAC CGATCTGTCTGGTCAGCCGCAGGGAGAAACGGCAGCGAGGCCGACAACGTCACAGTTGCCACCACCTTTTCCGAG CTGGACGAGATGATCACCGAAGCTGCGGCTGGGTATAGAAGGGGGGCACTCTACAAGGCGCCGTATGTTGAAGAT GGAGGAGGGTAG |
| Gene | >Hirsu2|3364 ATGACGCTGGAAGGCTGGGAGGGATTCGTCGCCGTGGAAGAGTTCCCCGGAATCTGGGCCCTGTACTTCGACCGG GACGACGATGGCCTTGTGGGCAAGGTACCCATGGGGACGCGGGTGTTGGAGGTTGAGCTCACAAGGAGAGAAAAG AAGGAGTCCAAGGCTGCCCGTGAAACCGCCGCGAGCCAACCCCAGGCATTCGTCTCGAGTCAAGATGCCGAGAAG AGCGAATCGGTCCCAGAAACCTTTAACAACCAGGACGAGAAACTAATACCTCTCGAGCACGAGAACCAGACCGCG CCGCGAACAACGGCCTCATTCGACATCCACGAGACCGCTCAAGAGCCGTGGGGCTCACGCGTCATGTCTGGCAGC GATGATGGCACCTCGAGAGCAGTGGAAAACAGCATCGACGGGGATATCCCTTACTCGCCCAGCGCCGTCGATAAC CGATCTGTCTGGTCAGCCGCAGGGAGAAACGGCAGCGAGGCCGACAACGTCACAGTTGCCACCACCTTTTCCGAG CTGGACGAGATGATCACCGAAGCTGCGGCTGGGTATAGAAGGGGGGCACTCTACAAGGCGCCGTATGTTGAAGAT GGAGGAGGGTAG |