© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3363 |
| Gene name | |
| Location | Contig_187:26278..27503 |
| Strand | - |
| Gene length (bp) | 1225 |
| Transcript length (bp) | 1128 |
| Coding sequence length (bp) | 1128 |
| Protein length (aa) | 376 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.7149 | 0.2801 | 0.1365 | 0.1869 | 0.1541 | 0.0338 | 0.1457 | 0.2063 | 0.1888 | 0.2948 |
| Orthofinder run ID | 4 |
| Orthogroup | 6597 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps australis 1348a (Ghana) | OphauG2|6182 |
| Ophiocordyceps australis map64 (Brazil) | OphauB2|4984 |
| Ophiocordyceps subramaniannii | Hirsu2|3363 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3363 MVDSLLGAISDDVYDSDEAAAPVVTALGSGGRYYICMKTRSNEYKQYSQGLPKTLHEWLFPADGSTRDLETLQVI LIGDDGFRASDKQGELRSDEQRSSPSFQRRMTWHSQKFASAGEEPADNNSSNRPDGQTQLRRRPSTIPHPSAALA QSSLTHARSSSVDKSSVRSRIARLQRKATDPGDVPRLPAGPKEEESSGDLGPEMISRPPSMLPSKPLSRRSWRPI AADRDEEASSQGDAHKPDPEAQSQSSDVSQPVRSTVSFRYADAAVQTEPSPTPPVSSSSPPPPPPPQPQKSCTCQ CHESASLYADSQSIDGDGGFGIPIRYHSPISDSGSFSPDFHYFNPIAMGKMQEYFRSTTYALGDALQSYEVEYGI * |
| Coding | >Hirsu2|3363 ATGGTCGACAGTCTCTTGGGGGCCATAAGCGATGATGTCTACGATTCTGACGAGGCCGCCGCACCGGTCGTCACC GCGCTTGGGTCGGGCGGGCGGTACTACATCTGCATGAAGACGCGGTCCAACGAGTACAAGCAATATTCTCAAGGA CTTCCGAAGACCCTGCACGAATGGTTGTTTCCCGCCGACGGCAGCACACGAGATTTGGAGACCCTGCAGGTCATC CTGATCGGCGACGACGGCTTCCGAGCTTCAGACAAGCAGGGCGAGCTGAGAAGCGACGAGCAGCGCTCGAGCCCG AGCTTCCAGAGACGCATGACCTGGCACAGCCAGAAGTTCGCGTCTGCCGGCGAGGAGCCGGCGGACAACAACAGC AGCAACCGCCCCGACGGCCAGACACAACTGCGAAGGCGGCCCAGCACCATCCCACACCCTTCGGCCGCCCTGGCT CAGTCGTCGCTGACCCACGCCCGCTCCTCTTCTGTCGACAAGTCCAGCGTCCGGTCCCGGATTGCACGCCTGCAA AGAAAGGCCACCGATCCGGGGGACGTGCCACGGCTGCCGGCCGGGCCGAAGGAAGAGGAGAGCTCGGGTGATTTG GGACCAGAGATGATATCGCGCCCGCCGAGCATGCTTCCGTCGAAGCCTCTCAGCCGCCGCTCCTGGCGCCCTATC GCGGCCGACCGGGATGAAGAAGCGTCGTCTCAGGGAGATGCGCACAAGCCGGATCCGGAGGCGCAATCGCAGAGC TCAGATGTATCACAGCCGGTCCGGTCCACGGTTTCATTTCGCTACGCGGATGCCGCCGTCCAGACGGAGCCGTCG CCGACACCCCCTGTATCGTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGCAGCCGCAAAAAAGCTGTACGTGCCAA TGTCACGAATCGGCTTCTCTGTACGCCGACAGCCAGAGCATTGACGGCGACGGTGGGTTCGGCATACCCATACGA TACCACTCCCCAATATCCGATTCTGGATCATTCTCTCCCGACTTTCACTACTTCAATCCCATCGCAATGGGGAAG ATGCAGGAGTATTTTCGATCGACGACCTACGCACTGGGTGATGCACTACAATCGTACGAGGTGGAATATGGGATC TAA |
| Transcript | >Hirsu2|3363 ATGGTCGACAGTCTCTTGGGGGCCATAAGCGATGATGTCTACGATTCTGACGAGGCCGCCGCACCGGTCGTCACC GCGCTTGGGTCGGGCGGGCGGTACTACATCTGCATGAAGACGCGGTCCAACGAGTACAAGCAATATTCTCAAGGA CTTCCGAAGACCCTGCACGAATGGTTGTTTCCCGCCGACGGCAGCACACGAGATTTGGAGACCCTGCAGGTCATC CTGATCGGCGACGACGGCTTCCGAGCTTCAGACAAGCAGGGCGAGCTGAGAAGCGACGAGCAGCGCTCGAGCCCG AGCTTCCAGAGACGCATGACCTGGCACAGCCAGAAGTTCGCGTCTGCCGGCGAGGAGCCGGCGGACAACAACAGC AGCAACCGCCCCGACGGCCAGACACAACTGCGAAGGCGGCCCAGCACCATCCCACACCCTTCGGCCGCCCTGGCT CAGTCGTCGCTGACCCACGCCCGCTCCTCTTCTGTCGACAAGTCCAGCGTCCGGTCCCGGATTGCACGCCTGCAA AGAAAGGCCACCGATCCGGGGGACGTGCCACGGCTGCCGGCCGGGCCGAAGGAAGAGGAGAGCTCGGGTGATTTG GGACCAGAGATGATATCGCGCCCGCCGAGCATGCTTCCGTCGAAGCCTCTCAGCCGCCGCTCCTGGCGCCCTATC GCGGCCGACCGGGATGAAGAAGCGTCGTCTCAGGGAGATGCGCACAAGCCGGATCCGGAGGCGCAATCGCAGAGC TCAGATGTATCACAGCCGGTCCGGTCCACGGTTTCATTTCGCTACGCGGATGCCGCCGTCCAGACGGAGCCGTCG CCGACACCCCCTGTATCGTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGCAGCCGCAAAAAAGCTGTACGTGCCAA TGTCACGAATCGGCTTCTCTGTACGCCGACAGCCAGAGCATTGACGGCGACGGTGGGTTCGGCATACCCATACGA TACCACTCCCCAATATCCGATTCTGGATCATTCTCTCCCGACTTTCACTACTTCAATCCCATCGCAATGGGGAAG ATGCAGGAGTATTTTCGATCGACGACCTACGCACTGGGTGATGCACTACAATCGTACGAGGTGGAATATGGGATC TAA |
| Gene | >Hirsu2|3363 ATGGTCGACAGTCTCTTGGGGGCCATAAGCGATGATGTCTACGATTCTGACGAGGCCGCCGCACCGGTCGTCACC GCGCTTGGGTCGGGCGGGCGGTACTACATCTGCATGAAGACGCGGTCCAACGAGTACAAGCAATGTAAGAGAGAG AGGGGGAGAGAGAGACGAAAGAGATCCTGAAGATGGCGTCACCGGACGTGAAGCCTCGACTAACCTCTGAGCGCA CGTGAACGCAGATTCTCAAGGACTTCCGAAGACCCTGCACGAATGGTTGTTTCCCGCCGACGGCAGCACACGAGA TTTGGAGACCCTGCAGGTCATCCTGATCGGCGACGACGGCTTCCGAGCTTCAGACAAGCAGGGCGAGCTGAGAAG CGACGAGCAGCGCTCGAGCCCGAGCTTCCAGAGACGCATGACCTGGCACAGCCAGAAGTTCGCGTCTGCCGGCGA GGAGCCGGCGGACAACAACAGCAGCAACCGCCCCGACGGCCAGACACAACTGCGAAGGCGGCCCAGCACCATCCC ACACCCTTCGGCCGCCCTGGCTCAGTCGTCGCTGACCCACGCCCGCTCCTCTTCTGTCGACAAGTCCAGCGTCCG GTCCCGGATTGCACGCCTGCAAAGAAAGGCCACCGATCCGGGGGACGTGCCACGGCTGCCGGCCGGGCCGAAGGA AGAGGAGAGCTCGGGTGATTTGGGACCAGAGATGATATCGCGCCCGCCGAGCATGCTTCCGTCGAAGCCTCTCAG CCGCCGCTCCTGGCGCCCTATCGCGGCCGACCGGGATGAAGAAGCGTCGTCTCAGGGAGATGCGCACAAGCCGGA TCCGGAGGCGCAATCGCAGAGCTCAGATGTATCACAGCCGGTCCGGTCCACGGTTTCATTTCGCTACGCGGATGC CGCCGTCCAGACGGAGCCGTCGCCGACACCCCCTGTATCGTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGCAGCC GCAAAAAAGCTGTACGTGCCAATGTCACGAATCGGCTTCTCTGTACGCCGACAGCCAGAGCATTGACGGCGACGG TGGGTTCGGCATACCCATACGATACCACTCCCCAATATCCGATTCTGGATCATTCTCTCCCGACTTTCACTACTT CAATCCCATCGCAATGGGGAAGATGCAGGAGTATTTTCGATCGACGACCTACGCACTGGGTGATGCACTACAATC GTACGAGGTGGAATATGGGATCTAA |