Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3359
Gene name
LocationContig_187:17718..19839
Strand+
Gene length (bp)2121
Transcript length (bp)1833
Coding sequence length (bp)1833
Protein length (aa) 611

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01699 Na_Ca_ex Sodium/calcium exchanger protein 1.8E-14 124 276
PF01699 Na_Ca_ex Sodium/calcium exchanger protein 1.4E-17 466 609

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q99385|VCX1_YEAST Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 441 610 1.0E-31
sp|O59768|VCX1_SCHPO Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 434 609 4.0E-26
sp|Q99385|VCX1_YEAST Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 70 301 7.0E-25
sp|Q75XW3|CAX_APHHA Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 467 609 9.0E-24
sp|O59768|VCX1_SCHPO Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 65 260 2.0E-23
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Swissprot ID Swissprot Description Start End E-value
sp|Q99385|VCX1_YEAST Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 441 610 1.0E-31
sp|O59768|VCX1_SCHPO Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 434 609 4.0E-26
sp|Q99385|VCX1_YEAST Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 70 301 7.0E-25
sp|Q75XW3|CAX_APHHA Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 467 609 9.0E-24
sp|O59768|VCX1_SCHPO Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 65 260 2.0E-23
sp|Q5KQN0|CAX2_ORYSJ Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 466 610 4.0E-22
sp|Q6K1C4|CAX3_ORYSJ Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 466 610 8.0E-22
sp|Q6YXZ1|CAX4_ORYSJ Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1 439 610 1.0E-21
sp|Q8L783|CAX5_ARATH Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 82 281 7.0E-21
sp|Q39254|CAX2_ARATH Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 439 610 1.0E-20
sp|Q8L783|CAX5_ARATH Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 443 610 3.0E-20
sp|Q39254|CAX2_ARATH Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 97 299 4.0E-20
sp|Q6K1C4|CAX3_ORYSJ Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 48 281 8.0E-20
sp|Q9LFZ8|CAX6_ARATH Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3 83 281 1.0E-19
sp|Q5KQN0|CAX2_ORYSJ Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 103 281 1.0E-18
sp|Q9LFZ8|CAX6_ARATH Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3 367 610 1.0E-18
sp|Q75XW3|CAX_APHHA Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 106 281 2.0E-18
sp|Q945S5|CAX4_ARATH Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2 449 610 2.0E-18
sp|P74072|CAX_SYNY3 Ca(2+)/H(+) antiporter OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1336 PE=1 SV=1 470 610 4.0E-18
sp|Q39253|CAX1_ARATH Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3 445 610 4.0E-17
sp|Q769E5|CAX1A_ORYSJ Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1 466 609 5.0E-17
sp|Q93Z81|CAX3_ARATH Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1 467 610 1.0E-16
sp|P74072|CAX_SYNY3 Ca(2+)/H(+) antiporter OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1336 PE=1 SV=1 106 281 3.0E-16
sp|Q5TKG3|CAX1B_ORYSJ Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1 126 281 5.0E-16
sp|Q6YXZ1|CAX4_ORYSJ Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1 126 295 2.0E-13
sp|Q5TKG3|CAX1B_ORYSJ Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1 484 610 2.0E-13
sp|Q769E5|CAX1A_ORYSJ Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1 55 281 2.0E-12
sp|Q93Z81|CAX3_ARATH Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1 96 281 2.0E-12
sp|Q945S5|CAX4_ARATH Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2 126 278 3.0E-12
sp|O34840|CHAA_BACSU Ca(2+)/H(+) antiporter ChaA OS=Bacillus subtilis (strain 168) GN=chaA PE=1 SV=1 457 610 3.0E-12
sp|Q39253|CAX1_ARATH Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3 110 297 4.0E-12
sp|O34840|CHAA_BACSU Ca(2+)/H(+) antiporter ChaA OS=Bacillus subtilis (strain 168) GN=chaA PE=1 SV=1 127 289 1.0E-10
sp|Q5KTQ9|CAX1C_ORYSJ Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1 461 610 4.0E-09
sp|Q9P7B3|YI14_SCHPO Putative cation exchanger C521.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC521.04c PE=1 SV=1 83 246 1.0E-06
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0031224 intrinsic component of membrane No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0051179 localization No
GO:0051234 establishment of localization No
GO:0044425 membrane part No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 102 124 22
2 156 178 22
3 188 210 22
4 223 242 19
5 252 274 22
6 459 481 22
7 501 523 22
8 530 552 22
9 562 584 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3359
MSDGGGGGGGGDDDEPPALPPPAQPEPKAGLHTILAFSVKDGIQNTLHPWLSLLARKLKGPSLPPPDDADVLRPL
LGLAPACRRSAPSPVARAVLDILCSSWLNTLLIFVPVGVGSYVAGMSPLMTFATNAAAIVPLSALLTDATERVAA
YAGDTAGALLNISLGNLVELILFAALAHGHVRIVEASILGSVLVNLLLILGSALLVGSTVNDQPTYNTADAQLLA
CLLFVSVFTFLMPTAFDYTFGQEKRSSVISLKLSRISSLLILAIYVLYIMHEIRSRYRGEERARATRDVDVESNL
SASNQRQFFAGHPPPPPPLPHFHHSPVPSPRTIRFADEQSALPQGPSAYVAGSRGEMDSLRVPQMHDDYAFDCRG
RQRSDGGERRPRANSHQPPMHQRKHSPSLSLRSYHGCLSRDSSVCGNLRAPPRSGLVGLQMLRDGRLDRDPAYVE
EEEQTESESLSAVVVSLATLIVTSGLMSVNAELLVDAIDGVTRQTNLSESVIGLIILPIVGNIAEYVTVVAVAAR
DKMDLAIAVAVGSSIQIALCVTPLTILAGWILQRDLALTFNFFEMATLMGGVLLANLLILNESSSGLRTTGLKGA
LMCACYLIIA*
Coding >Hirsu2|3359
ATGTCCGACGGCGGCGGCGGCGGCGGCGGCGGCGACGACGACGAACCCCCCGCTTTGCCGCCGCCGGCCCAGCCC
GAGCCGAAAGCCGGTCTCCATACCATCTTAGCCTTCTCCGTCAAAGACGGCATCCAAAACACCCTGCATCCGTGG
CTTTCTCTTCTCGCGAGAAAGCTCAAAGGCCCGTCGCTGCCGCCGCCCGACGACGCCGACGTGCTCCGTCCGCTG
CTCGGCCTGGCCCCGGCATGCCGGCGGAGCGCGCCGAGTCCGGTCGCCCGCGCCGTGCTCGACATTCTGTGCTCG
TCGTGGCTGAACACGCTCCTGATCTTCGTGCCGGTTGGCGTCGGCAGCTACGTCGCCGGCATGAGCCCGTTGATG
ACCTTCGCCACCAATGCCGCCGCCATTGTTCCCCTGTCGGCTCTCCTGACGGACGCAACCGAGAGGGTGGCCGCC
TACGCCGGCGACACCGCCGGCGCGCTGCTGAACATCAGCCTGGGGAACCTCGTCGAGCTGATTCTGTTCGCTGCT
TTGGCACACGGTCATGTGCGGATAGTGGAAGCCTCCATCCTCGGCTCCGTTCTCGTCAACTTGCTGCTCATTCTC
GGCTCGGCCCTCCTTGTGGGCAGCACCGTCAACGACCAGCCGACGTACAACACGGCTGATGCCCAGCTTCTGGCT
TGCTTGCTCTTCGTCTCCGTCTTCACGTTTTTGATGCCCACCGCATTCGACTATACCTTTGGCCAAGAGAAGCGA
TCGAGTGTGATCAGCTTGAAGCTGAGCAGAATCTCCTCGCTTCTCATCCTGGCCATCTACGTTCTCTACATCATG
CACGAGATACGCTCGCGATATCGAGGCGAAGAGCGAGCCAGGGCGACTCGCGATGTCGACGTGGAAAGCAATCTG
TCTGCTTCCAACCAGCGGCAGTTCTTTGCTGGTCATCCTCCTCCTCCTCCCCCATTGCCTCACTTTCACCACTCA
CCGGTCCCGTCGCCTCGCACCATCCGCTTCGCGGATGAACAGTCGGCTCTGCCCCAGGGGCCATCGGCCTACGTA
GCCGGCAGCCGCGGCGAGATGGATTCTCTCCGGGTGCCGCAGATGCACGACGACTATGCGTTCGACTGCCGCGGC
CGCCAGCGAAGCGACGGCGGCGAGCGGCGGCCTCGTGCCAACTCGCACCAGCCGCCGATGCACCAGCGCAAGCAC
TCCCCGTCGCTGTCGCTGCGCTCCTATCACGGCTGCCTGAGCCGCGACTCCTCCGTCTGCGGCAACCTCCGAGCG
CCGCCACGGTCCGGGCTGGTCGGCCTGCAGATGCTGCGCGACGGGCGGCTGGACCGGGATCCGGCCTACGTGGAG
GAGGAGGAGCAGACCGAGTCGGAGTCGCTCAGTGCGGTCGTCGTGTCGCTGGCCACGCTCATCGTCACGTCCGGT
CTCATGTCCGTCAACGCCGAGCTGCTCGTGGACGCCATCGACGGCGTGACGCGCCAGACCAACCTCTCGGAGTCA
GTCATCGGCCTCATCATTCTCCCGATCGTCGGCAACATCGCCGAGTACGTGACGGTTGTGGCTGTCGCCGCGAGA
GACAAGATGGACTTGGCCATTGCCGTTGCCGTCGGCTCGTCCATCCAGATCGCCCTCTGCGTCACGCCCCTAACC
ATCCTCGCCGGCTGGATCCTGCAGCGAGACCTGGCCCTGACCTTCAATTTCTTCGAGATGGCCACTCTGATGGGC
GGCGTGCTGCTCGCAAACCTCCTCATCCTCAACGAATCGAGCAGCGGCCTCAGGACCACCGGCCTGAAGGGCGCG
TTGATGTGTGCCTGCTATCTCATCATCGCGTGA
Transcript >Hirsu2|3359
ATGTCCGACGGCGGCGGCGGCGGCGGCGGCGGCGACGACGACGAACCCCCCGCTTTGCCGCCGCCGGCCCAGCCC
GAGCCGAAAGCCGGTCTCCATACCATCTTAGCCTTCTCCGTCAAAGACGGCATCCAAAACACCCTGCATCCGTGG
CTTTCTCTTCTCGCGAGAAAGCTCAAAGGCCCGTCGCTGCCGCCGCCCGACGACGCCGACGTGCTCCGTCCGCTG
CTCGGCCTGGCCCCGGCATGCCGGCGGAGCGCGCCGAGTCCGGTCGCCCGCGCCGTGCTCGACATTCTGTGCTCG
TCGTGGCTGAACACGCTCCTGATCTTCGTGCCGGTTGGCGTCGGCAGCTACGTCGCCGGCATGAGCCCGTTGATG
ACCTTCGCCACCAATGCCGCCGCCATTGTTCCCCTGTCGGCTCTCCTGACGGACGCAACCGAGAGGGTGGCCGCC
TACGCCGGCGACACCGCCGGCGCGCTGCTGAACATCAGCCTGGGGAACCTCGTCGAGCTGATTCTGTTCGCTGCT
TTGGCACACGGTCATGTGCGGATAGTGGAAGCCTCCATCCTCGGCTCCGTTCTCGTCAACTTGCTGCTCATTCTC
GGCTCGGCCCTCCTTGTGGGCAGCACCGTCAACGACCAGCCGACGTACAACACGGCTGATGCCCAGCTTCTGGCT
TGCTTGCTCTTCGTCTCCGTCTTCACGTTTTTGATGCCCACCGCATTCGACTATACCTTTGGCCAAGAGAAGCGA
TCGAGTGTGATCAGCTTGAAGCTGAGCAGAATCTCCTCGCTTCTCATCCTGGCCATCTACGTTCTCTACATCATG
CACGAGATACGCTCGCGATATCGAGGCGAAGAGCGAGCCAGGGCGACTCGCGATGTCGACGTGGAAAGCAATCTG
TCTGCTTCCAACCAGCGGCAGTTCTTTGCTGGTCATCCTCCTCCTCCTCCCCCATTGCCTCACTTTCACCACTCA
CCGGTCCCGTCGCCTCGCACCATCCGCTTCGCGGATGAACAGTCGGCTCTGCCCCAGGGGCCATCGGCCTACGTA
GCCGGCAGCCGCGGCGAGATGGATTCTCTCCGGGTGCCGCAGATGCACGACGACTATGCGTTCGACTGCCGCGGC
CGCCAGCGAAGCGACGGCGGCGAGCGGCGGCCTCGTGCCAACTCGCACCAGCCGCCGATGCACCAGCGCAAGCAC
TCCCCGTCGCTGTCGCTGCGCTCCTATCACGGCTGCCTGAGCCGCGACTCCTCCGTCTGCGGCAACCTCCGAGCG
CCGCCACGGTCCGGGCTGGTCGGCCTGCAGATGCTGCGCGACGGGCGGCTGGACCGGGATCCGGCCTACGTGGAG
GAGGAGGAGCAGACCGAGTCGGAGTCGCTCAGTGCGGTCGTCGTGTCGCTGGCCACGCTCATCGTCACGTCCGGT
CTCATGTCCGTCAACGCCGAGCTGCTCGTGGACGCCATCGACGGCGTGACGCGCCAGACCAACCTCTCGGAGTCA
GTCATCGGCCTCATCATTCTCCCGATCGTCGGCAACATCGCCGAGTACGTGACGGTTGTGGCTGTCGCCGCGAGA
GACAAGATGGACTTGGCCATTGCCGTTGCCGTCGGCTCGTCCATCCAGATCGCCCTCTGCGTCACGCCCCTAACC
ATCCTCGCCGGCTGGATCCTGCAGCGAGACCTGGCCCTGACCTTCAATTTCTTCGAGATGGCCACTCTGATGGGC
GGCGTGCTGCTCGCAAACCTCCTCATCCTCAACGAATCGAGCAGCGGCCTCAGGACCACCGGCCTGAAGGGCGCG
TTGATGTGTGCCTGCTATCTCATCATCGCGTGA
Gene >Hirsu2|3359
ATGTCCGACGGCGGCGGCGGCGGCGGCGGCGGCGACGACGACGAACCCCCCGCTTTGCCGCCGCCGGCCCAGCCC
GAGCCGAAAGCCGGTCTCCATACCATCTTAGCCTTCTCCGTCAAAGGTGGGTGTCCTGCTCTGGCCAAAGAGTCT
CGTCGTGCCAGCCGCGGCGCCGGCCGGAGAGACCGCCTTGCCTCGCAAAGCTAATGCCGACGGCTCCCGAGCGCG
CCAGACGGCATCCAAAACACCCTGCATCCGTGGCTTTCTCTTCTCGCGAGAAAGCTCAAAGGCCCGTCGCTGCCG
CCGCCCGACGACGCCGACGTGCTCCGTCCGCTGCTCGGCCTGGCCCCGGCATGCCGGCGGAGCGCGCCGAGTCCG
GTCGCCCGCGCCGTGCTCGACATTCTGTGCTCGTCGTGGCTGAACACGCTCCTGATCTTCGTGCCGGTTGGCGTC
GGCAGCTACGTCGCCGGCATGAGCCCGTTGATGACCTTCGCCACCAATGCCGCCGCCATTGTTCCCCTGTCGGCT
CTCCTGACGGACGCAACCGAGAGGGTGGCCGCCTACGCCGGCGACACCGCCGGCGCGCTGCTGAACATCAGCCTG
GGGAACCTCGTCGAGCTGATTCTGTTGTAAGGCGCCCCCCGCCGTCCTTTGCGCTCTTCCGTTTCGCTGCTTTGC
TGACGCCCCGGAGCAGCATGTAAGTCGTTGCGTCCCGGAAGCCCGGCAAGGGAGCGCCCTCAACTCACTCTTGCA
AGCGCTGCTTTGGCACACGGTCATGTGCGGATAGTGGAAGCCTCCATCCTCGGCTCCGTTCTCGTCAACTTGCTG
CTCATTCTCGGCTCGGCCCTCCTTGTGGGCAGCACCGTCAACGACCAGCCGACGTACAACACGGCTGATGCCCAG
CTTCTGGCTTGCTTGCTCTTCGTCTCCGTCTTCACGTTTTTGATGCCCGTATGGTGCCTGTCCAGGTCCGAGTTC
GCGGCGCGGCGTGCTGACCCCTTGTAGACCGCATTCGACTATACCTTTGGCCAAGAGAAGCGATCGAGTGTGATC
AGCTTGAAGCTGAGCAGAATCTCCTCGCTTCTCATCCTGGCCATCTACGTTCTCTACATCATGCACGAGATACGC
TCGCGATATCGAGGCGAAGAGCGAGCCAGGGCGACTCGCGATGTCGACGTGGAAAGCAATCTGTCTGCTTCCAAC
CAGCGGCAGTTCTTTGCTGGTCATCCTCCTCCTCCTCCCCCATTGCCTCACTTTCACCACTCACCGGTCCCGTCG
CCTCGCACCATCCGCTTCGCGGATGAACAGTCGGCTCTGCCCCAGGGGCCATCGGCCTACGTAGCCGGCAGCCGC
GGCGAGATGGATTCTCTCCGGGTGCCGCAGATGCACGACGACTATGCGTTCGACTGCCGCGGCCGCCAGCGAAGC
GACGGCGGCGAGCGGCGGCCTCGTGCCAACTCGCACCAGCCGCCGATGCACCAGCGCAAGCACTCCCCGTCGCTG
TCGCTGCGCTCCTATCACGGCTGCCTGAGCCGCGACTCCTCCGTCTGCGGCAACCTCCGAGCGCCGCCACGGTCC
GGGCTGGTCGGCCTGCAGATGCTGCGCGACGGGCGGCTGGACCGGGATCCGGCCTACGTGGAGGAGGAGGAGCAG
ACCGAGTCGGAGTCGCTCAGTGCGGTCGTCGTGTCGCTGGCCACGCTCATCGTCACGTCCGGTCTCATGTCCGTC
AACGCCGAGCTGCTCGTGGACGCCATCGACGGCGTGACGCGCCAGACCAACCTCTCGGAGTCAGTCATCGGCCTC
ATCATTCTCCCGATCGTCGGCAACATCGCCGAGTACGTGACGGTTGTGGCTGTCGCCGCGAGAGACAAGATGGAC
TTGGCCATTGCCGTTGCCGTCGGCTCGTCCATCCAGATCGCCCTCTGCGTCACGCCCCTAACCATCCTCGCCGGC
TGGATCCTGCAGCGAGACCTGGCCCTGACCTTCAATTTCTTCGAGATGGCCACTCTGATGGGCGGCGTGCTGCTC
GCAAACCTCCTCATCCTCAACGAATCGAGCAGCGGCCTCAGGACCACCGGCCTGAAGGGCGCGTTGATGTGTGCC
TGCTATCTCATCATCGCGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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