© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3358 |
| Gene name | |
| Location | Contig_187:15946..16837 |
| Strand | - |
| Gene length (bp) | 891 |
| Transcript length (bp) | 753 |
| Coding sequence length (bp) | 753 |
| Protein length (aa) | 251 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00583 | Acetyltransf_1 | Acetyltransferase (GNAT) family | 1.2E-04 | 127 | 184 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008080 | N-acetyltransferase activity | Yes |
| GO:0016410 | N-acyltransferase activity | No |
| GO:0016407 | acetyltransferase activity | No |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0016746 | acyltransferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Mitochondrion | Peroxisomal targeting signal | 0.5228 | 0.2214 | 0.1464 | 0.2562 | 0.7324 | 0.3722 | 0.4021 | 0.1916 | 0.5362 | 0.5629 |
| Orthofinder run ID | 4 |
| Orthogroup | 2387 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3358 MKVRPATAADVPAVARLVLAALADEAPWKAFCPPRGSSGYVEYVETALRSCLESLHHVFYVLELSEAESGARSGP LVVSASVWDTSAAAAAAADAHCRSVSPADEVHESAGGKASNSRDAAAAKIPDKLAALGRATLAGWERRFPSHGPC LYLQLLATRPDYQRRGYGRAIVSWGTDLARKKHVPACVQAASRAYVLFSGLGFVDLGLVPLPADEETGEERSLKA LILRPSPEPQRRSLMAPLSRFFSNR* |
| Coding | >Hirsu2|3358 ATGAAGGTGAGGCCCGCCACCGCCGCCGACGTGCCGGCCGTCGCCCGCCTCGTCCTGGCCGCCCTCGCCGACGAG GCCCCCTGGAAGGCCTTCTGTCCGCCCAGGGGCTCGTCCGGCTACGTCGAGTACGTCGAGACGGCGCTGAGGAGC TGCCTCGAAAGCCTCCACCACGTCTTCTACGTGCTGGAGCTCTCCGAAGCCGAAAGCGGCGCGCGCTCCGGTCCG CTCGTCGTATCCGCCTCCGTCTGGGACACGTCTGCTGCTGCTGCTGCTGCTGCCGACGCGCACTGCCGATCTGTG AGTCCTGCTGACGAAGTGCATGAGAGCGCCGGCGGCAAGGCTTCCAATTCGCGCGATGCCGCCGCTGCCAAGATC CCAGATAAGCTCGCAGCCCTCGGCCGGGCCACGCTCGCCGGCTGGGAGCGGCGCTTCCCCAGCCACGGCCCGTGC CTGTACCTCCAGCTGCTGGCGACCCGGCCTGACTATCAGCGGCGTGGCTACGGCAGGGCCATTGTGTCGTGGGGG ACCGATCTGGCCAGGAAGAAGCATGTGCCGGCCTGTGTCCAGGCCGCCTCGCGCGCCTACGTCTTGTTCTCCGGT CTGGGCTTCGTCGACCTCGGGCTCGTGCCTCTTCCGGCCGACGAGGAGACGGGCGAGGAGCGCTCACTGAAGGCC TTGATCCTCCGTCCCAGTCCGGAGCCGCAGCGGAGGTCTCTGATGGCTCCGTTGTCACGCTTCTTCTCCAATCGT TGA |
| Transcript | >Hirsu2|3358 ATGAAGGTGAGGCCCGCCACCGCCGCCGACGTGCCGGCCGTCGCCCGCCTCGTCCTGGCCGCCCTCGCCGACGAG GCCCCCTGGAAGGCCTTCTGTCCGCCCAGGGGCTCGTCCGGCTACGTCGAGTACGTCGAGACGGCGCTGAGGAGC TGCCTCGAAAGCCTCCACCACGTCTTCTACGTGCTGGAGCTCTCCGAAGCCGAAAGCGGCGCGCGCTCCGGTCCG CTCGTCGTATCCGCCTCCGTCTGGGACACGTCTGCTGCTGCTGCTGCTGCTGCCGACGCGCACTGCCGATCTGTG AGTCCTGCTGACGAAGTGCATGAGAGCGCCGGCGGCAAGGCTTCCAATTCGCGCGATGCCGCCGCTGCCAAGATC CCAGATAAGCTCGCAGCCCTCGGCCGGGCCACGCTCGCCGGCTGGGAGCGGCGCTTCCCCAGCCACGGCCCGTGC CTGTACCTCCAGCTGCTGGCGACCCGGCCTGACTATCAGCGGCGTGGCTACGGCAGGGCCATTGTGTCGTGGGGG ACCGATCTGGCCAGGAAGAAGCATGTGCCGGCCTGTGTCCAGGCCGCCTCGCGCGCCTACGTCTTGTTCTCCGGT CTGGGCTTCGTCGACCTCGGGCTCGTGCCTCTTCCGGCCGACGAGGAGACGGGCGAGGAGCGCTCACTGAAGGCC TTGATCCTCCGTCCCAGTCCGGAGCCGCAGCGGAGGTCTCTGATGGCTCCGTTGTCACGCTTCTTCTCCAATCGT TGA |
| Gene | >Hirsu2|3358 ATGAAGGTGAGGCCCGCCACCGCCGCCGACGTGCCGGCCGTCGCCCGCCTCGTCCTGGCCGCCCTCGCCGACGAG GCCCCCTGGAAGGCCTTCTGTCCGCCCAGGGGCTCGTCCGGCTACGTCGAGTACGTCGAGACGGCGCTGAGGAGC TGCCTCGAAAGCCTCCACCACGTCTTCTACGTGCTGGAGCTCTCCGAAGCCGAAAGCGGCGCGCGCTCCGGTCCG CTCGTCGTATCCGCCTCCGTCTGGGACACGTCTGCTGCTGCTGCTGCTGCTGCCGACGCGCACTGCCGATCTGTG AGTCCTGCTGACGAAGTGCATGAGAGCGGTAAGTCGAGCGAGCTGCTGCTGCTTCGTCCCCTCACCCCTTCAACC TCCCCCCCCCCCCTTCTCACTCGTCCGACTTTCTGGCCGGCCGGCTTTGCTTACTCGGGCCCCCACGGTCTGGCC TTCTGTTCCACTGCAGCCGGCGGCAAGGCTTCCAATTCGCGCGATGCCGCCGCTGCCAAGATCCCAGATAAGCTC GCAGCCCTCGGCCGGGCCACGCTCGCCGGCTGGGAGCGGCGCTTCCCCAGCCACGGCCCGTGCCTGTACCTCCAG CTGCTGGCGACCCGGCCTGACTATCAGCGGCGTGGCTACGGCAGGGCCATTGTGTCGTGGGGGACCGATCTGGCC AGGAAGAAGCATGTGCCGGCCTGTGTCCAGGCCGCCTCGCGCGCCTACGTCTTGTTCTCCGGTCTGGGCTTCGTC GACCTCGGGCTCGTGCCTCTTCCGGCCGACGAGGAGACGGGCGAGGAGCGCTCACTGAAGGCCTTGATCCTCCGT CCCAGTCCGGAGCCGCAGCGGAGGTCTCTGATGGCTCCGTTGTCACGCTTCTTCTCCAATCGTTGA |