Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3336
Gene name
LocationContig_1863:677..1063
Strand+
Gene length (bp)386
Transcript length (bp)327
Coding sequence length (bp)327
Protein length (aa) 109

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 5 22 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3336
MGSHVAALVAVLCLAAGVRALLRRGPLPGRDTALSGDGQHMWRDTAGGRKTAEDRRRTTTQGRAATKRTTLRTMM
MMLTTMTTTSKTELEPEALRHARLRLRTAARAL*
Coding >Hirsu2|3336
ATGGGCAGCCACGTCGCGGCGCTCGTCGCCGTCCTGTGTCTCGCGGCGGGGGTGCGTGCGCTCCTCCGCCGCGGG
CCGCTGCCGGGACGCGATACAGCCCTGTCCGGCGACGGCCAGCACATGTGGCGCGACACGGCCGGGGGCCGGAAG
ACGGCAGAAGACAGGCGGCGCACAACGACACAAGGCCGTGCCGCCACGAAACGAACGACCTTACGAACGATGATG
ATGATGCTTACGACGATGACGACCACATCCAAGACGGAGCTCGAGCCCGAGGCGCTGCGGCACGCCCGCCTCCGC
CTCCGGACCGCCGCCCGGGCGCTCTGA
Transcript >Hirsu2|3336
ATGGGCAGCCACGTCGCGGCGCTCGTCGCCGTCCTGTGTCTCGCGGCGGGGGTGCGTGCGCTCCTCCGCCGCGGG
CCGCTGCCGGGACGCGATACAGCCCTGTCCGGCGACGGCCAGCACATGTGGCGCGACACGGCCGGGGGCCGGAAG
ACGGCAGAAGACAGGCGGCGCACAACGACACAAGGCCGTGCCGCCACGAAACGAACGACCTTACGAACGATGATG
ATGATGCTTACGACGATGACGACCACATCCAAGACGGAGCTCGAGCCCGAGGCGCTGCGGCACGCCCGCCTCCGC
CTCCGGACCGCCGCCCGGGCGCTCTGA
Gene >Hirsu2|3336
ATGGGCAGCCACGTCGCGGCGCTCGTCGCCGTCCTGTGTCTCGCGGCGGGGGTGCGTGCGCTCCTCCGCCGCGGG
CCGCTGCCGGGACGCGATACAGCGTATGTTGCTTGCTCCGCTTCCCTGTCTGGCTTTGCCTGGTTCGCTGACGAC
GCCGCAGCCTGTCCGGCGACGGCCAGCACATGTGGCGCGACACGGCCGGGGGCCGGAAGACGGCAGAAGACAGGC
GGCGCACAACGACACAAGGCCGTGCCGCCACGAAACGAACGACCTTACGAACGATGATGATGATGCTTACGACGA
TGACGACCACATCCAAGACGGAGCTCGAGCCCGAGGCGCTGCGGCACGCCCGCCTCCGCCTCCGGACCGCCGCCC
GGGCGCTCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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