Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|3329
Gene name
Location	Contig_186:26065..27447
Strand	-
Gene length (bp)	1382
Transcript length (bp)	1314
Coding sequence length (bp)	1314
Protein length (aa)	438

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00188	CAP	Cysteine-rich secretory protein family	1.3E-16	213	390

Swissprot hits

[Show all]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|D4B327\|PRY1_ARTBC	Probable pathogenesis-related protein ARB_02861 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02861 PE=3 SV=2	206	396	2.0E-09
sp\|P35778\|VA3_SOLIN	Venom allergen 3 OS=Solenopsis invicta PE=1 SV=2	229	400	2.0E-09
sp\|Q4V9Y5\|CRLD2_XENTR	Cysteine-rich secretory protein LCCL domain-containing 2 OS=Xenopus tropicalis GN=crispld2 PE=2 SV=1	209	404	1.0E-07
sp\|Q00008\|PRMS_MAIZE	Pathogenesis-related protein PRMS OS=Zea mays GN=PRMS PE=2 SV=1	348	396	3.0E-07
sp\|Q05968\|PR1_HORVU	Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1	348	401	7.0E-07

[Show all]

[Show less]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|D4B327\|PRY1_ARTBC	Probable pathogenesis-related protein ARB_02861 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02861 PE=3 SV=2	206	396	2.0E-09
sp\|P35778\|VA3_SOLIN	Venom allergen 3 OS=Solenopsis invicta PE=1 SV=2	229	400	2.0E-09
sp\|Q4V9Y5\|CRLD2_XENTR	Cysteine-rich secretory protein LCCL domain-containing 2 OS=Xenopus tropicalis GN=crispld2 PE=2 SV=1	209	404	1.0E-07
sp\|Q00008\|PRMS_MAIZE	Pathogenesis-related protein PRMS OS=Zea mays GN=PRMS PE=2 SV=1	348	396	3.0E-07
sp\|Q05968\|PR1_HORVU	Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1	348	401	7.0E-07
sp\|P35792\|PR12_HORVU	Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1	348	401	7.0E-07
sp\|P35793\|PR13_HORVU	Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1	348	401	8.0E-07
sp\|Q40374\|PR1_MEDTR	Pathogenesis-related protein PR-1 OS=Medicago truncatula GN=PR-1 PE=2 SV=1	347	401	1.0E-06

[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 16	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|3329 MRLFLFFAALPLAAAIPPKPTRTEGQVIPTGQGGPDGEVAPQDQQRPSNVEPEDQKGPDGNISITLTGREGELPK SITVDGETVEMEQADGADDVTRRWSYVNPNYRGRPNRNDWGWNPEQSYRGRGNQWHNNNRRPANDYGNAGNQWHN NNRRPANDYGNAGNQWYNNNNRRPANDYGNAGNQRGQAREPGEILTFYNSPHIFYEDFKKMTLDLHNKARNKHQN TDSLVWNEELAEDARRYSARCVYEHGHSDVGSGKRWGQNIAYSSWLSGSHNRQIPDEEKTPFYNAEEYLKRSFVH WWDWERFLYNWWNTREASSSLPVNDARGQEIMSWLQRKYPGKQIPPQVGHFTQIVWRETTEVGCAVTVCQPVRGP GVSPNHIGTFTVCNYAPSGNIYMDPPPQNSHRYTLYDTNVAWPQNWTTWWSELDNRVEEGEV*
Coding	>Hirsu2\|3329 ATGCGCCTGTTTCTGTTTTTCGCGGCGCTCCCGCTTGCGGCGGCCATTCCACCAAAACCAACCCGCACGGAGGGC CAAGTTATCCCCACAGGTCAGGGAGGCCCCGATGGTGAAGTTGCTCCCCAGGATCAGCAACGCCCGTCAAACGTA GAGCCCGAAGATCAGAAAGGCCCGGATGGCAATATTTCCATTACCCTGACTGGACGGGAGGGCGAACTCCCCAAA AGCATTACAGTGGACGGGGAAACGGTGGAGATGGAGCAAGCCGATGGCGCTGACGACGTGACCCGACGATGGTCC TACGTGAACCCCAACTACCGAGGTCGGCCGAACCGCAATGATTGGGGCTGGAACCCCGAGCAATCGTACCGGGGG CGAGGGAACCAGTGGCACAACAACAATAGACGTCCTGCGAATGATTACGGCAACGCGGGAAACCAATGGCACAAC AACAATAGACGTCCTGCGAATGATTACGGCAACGCAGGAAACCAGTGGTACAACAACAACAACAGACGTCCTGCG AATGACTATGGCAACGCGGGAAACCAGCGGGGCCAGGCCCGTGAGCCCGGGGAGATCTTGACCTTTTACAACAGC CCTCACATCTTCTACGAGGACTTCAAAAAAATGACACTCGACTTGCACAACAAGGCCCGGAACAAGCACCAGAAC ACTGATTCTCTCGTCTGGAACGAAGAACTGGCGGAAGACGCACGAAGGTATTCTGCCCGCTGCGTGTACGAACAC GGGCATTCCGACGTTGGGTCAGGGAAACGCTGGGGCCAAAACATTGCCTATTCTTCGTGGTTGAGCGGATCTCAC AATCGCCAAATACCGGATGAGGAGAAAACCCCCTTTTATAATGCTGAAGAATATTTGAAAAGAAGTTTTGTCCAC TGGTGGGATTGGGAAAGGTTTCTTTACAACTGGTGGAACACCCGCGAGGCATCATCGTCACTTCCGGTCAACGAT GCCCGGGGGCAGGAAATCATGAGCTGGCTACAAAGGAAGTATCCGGGGAAACAGATACCACCTCAGGTCGGACAT TTCACTCAGATTGTCTGGAGAGAAACCACCGAGGTCGGCTGCGCCGTTACTGTATGCCAGCCAGTGCGTGGCCCT GGGGTTTCACCCAACCATATCGGCACGTTTACTGTCTGCAATTATGCCCCATCAGGCAATATCTATATGGATCCC CCACCCCAAAATTCTCATAGGTACACCTTGTACGATACAAATGTTGCATGGCCACAGAACTGGACGACATGGTGG TCTGAACTTGATAATAGGGTTGAAGAGGGAGAAGTATAG
Transcript	>Hirsu2\|3329 ATGCGCCTGTTTCTGTTTTTCGCGGCGCTCCCGCTTGCGGCGGCCATTCCACCAAAACCAACCCGCACGGAGGGC CAAGTTATCCCCACAGGTCAGGGAGGCCCCGATGGTGAAGTTGCTCCCCAGGATCAGCAACGCCCGTCAAACGTA GAGCCCGAAGATCAGAAAGGCCCGGATGGCAATATTTCCATTACCCTGACTGGACGGGAGGGCGAACTCCCCAAA AGCATTACAGTGGACGGGGAAACGGTGGAGATGGAGCAAGCCGATGGCGCTGACGACGTGACCCGACGATGGTCC TACGTGAACCCCAACTACCGAGGTCGGCCGAACCGCAATGATTGGGGCTGGAACCCCGAGCAATCGTACCGGGGG CGAGGGAACCAGTGGCACAACAACAATAGACGTCCTGCGAATGATTACGGCAACGCGGGAAACCAATGGCACAAC AACAATAGACGTCCTGCGAATGATTACGGCAACGCAGGAAACCAGTGGTACAACAACAACAACAGACGTCCTGCG AATGACTATGGCAACGCGGGAAACCAGCGGGGCCAGGCCCGTGAGCCCGGGGAGATCTTGACCTTTTACAACAGC CCTCACATCTTCTACGAGGACTTCAAAAAAATGACACTCGACTTGCACAACAAGGCCCGGAACAAGCACCAGAAC ACTGATTCTCTCGTCTGGAACGAAGAACTGGCGGAAGACGCACGAAGGTATTCTGCCCGCTGCGTGTACGAACAC GGGCATTCCGACGTTGGGTCAGGGAAACGCTGGGGCCAAAACATTGCCTATTCTTCGTGGTTGAGCGGATCTCAC AATCGCCAAATACCGGATGAGGAGAAAACCCCCTTTTATAATGCTGAAGAATATTTGAAAAGAAGTTTTGTCCAC TGGTGGGATTGGGAAAGGTTTCTTTACAACTGGTGGAACACCCGCGAGGCATCATCGTCACTTCCGGTCAACGAT GCCCGGGGGCAGGAAATCATGAGCTGGCTACAAAGGAAGTATCCGGGGAAACAGATACCACCTCAGGTCGGACAT TTCACTCAGATTGTCTGGAGAGAAACCACCGAGGTCGGCTGCGCCGTTACTGTATGCCAGCCAGTGCGTGGCCCT GGGGTTTCACCCAACCATATCGGCACGTTTACTGTCTGCAATTATGCCCCATCAGGCAATATCTATATGGATCCC CCACCCCAAAATTCTCATAGGTACACCTTGTACGATACAAATGTTGCATGGCCACAGAACTGGACGACATGGTGG TCTGAACTTGATAATAGGGTTGAAGAGGGAGAAGTATAG
Gene	>Hirsu2\|3329 ATGCGCCTGTTTCTGTTTTTCGCGGCGCTCCCGCTTGCGGCGGCCATTCCACCAAAACCAACCCGCACGGAGGGC CAAGTTATCCCCACAGGTCAGGGAGGCCCCGATGGTGAAGTTGCTCCCCAGGATCAGCAACGCCCGTCAAACGTA GAGCCCGAAGATCAGAAAGGCCCGGATGGCAATATTTCCATTACCCTGACTGGACGGGAGGGCGAACTCCCCAAA AGCATTACAGTGGACGGGGAAACGGTGGAGATGGAGCAAGCCGATGGCGCTGACGACGTGACCCGACGATGGTCC TACGTGAACCCCAACTACCGAGGTCGGCCGAACCGCAATGATTGGGGCTGGAACCCCGAGCAATCGTACCGGGGG CGAGGGAACCAGTGGCACAACAACAATAGACGTCCTGCGAATGATTACGGCAACGCGGGAAACCAATGGCACAAC AACAATAGACGTCCTGCGAATGATTACGGCAACGCAGGAAACCAGTGGTACAACAACAACAACAGACGTCCTGCG AATGACTATGGCAACGCGGGAAACCAGCGGGGCCAGGCCCGTGAGCCCGGGGAGATCTTGACCTTTTACAACAGC CCTCACATCTTCTACGAGGACTTCAAAAAAATGACACTCGACTTGCACAACAAGGCCCGGAACAAGCACCAGAAC ACTGATTCTCTCGTCTGGAACGAAGAACTGGCGGAAGACGCACGAAGGTATTCTGCCCGCTGCGTGTACGAACAC GGGCATTCCGACGTTGGGTCAGGGAAACGCTGGGGCCAAAACATTGCCTATTCTTCGTGGTTGAGCGGATCTCAC AATCGCCAAATACCGGATGAGGAGAAAACCCCCTTTTATAATGCTGAAGAATATTTGAAAAGAAGTTTTGTCCAC TGGTGGGATTGGGAAAGGTTTCTTTACAACTGGTGGAACACCCGCGAGGCATCATCGTCACTTCCGGTCAACGAT GCCCGGGGGCAGGAAATCATGAGCTGGCTACAAAGGAAGTATCCGGGGAAACAGATACCACCTCAGGTCGGACAT TTCACTCAGATTGTCTGGAGAGAAACCACCGAGGTCGGCTGCGCCGTTACTGTATGCCAGCCAGTGCGTGGCCCT GGGGTTTCACCCAACCATATCGGCACGTTTACTGTCTGCAATTATGCCCCATCAGGTGAGCTTAAGTATCCCCTG GCGAGCGAATCAGCTTGCCTCCTCACTTGTGCTAATGAAACGGTGCAGGCAATATCTATATGGATCCCCCACCCC AAAATTCTCATAGGTACACCTTGTACGATACAAATGTTGCATGGCCACAGAACTGGACGACATGGTGGTCTGAAC TTGATAATAGGGTTGAAGAGGGAGAAGTATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail