© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3324 |
| Gene name | |
| Location | Contig_186:9910..10153 |
| Strand | + |
| Gene length (bp) | 243 |
| Transcript length (bp) | 243 |
| Coding sequence length (bp) | 243 |
| Protein length (aa) | 81 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.0579 | 0.0604 | 0.9652 | 0.0588 | 0.0672 | 0.0055 | 0.0465 | 0.0658 | 0.0462 | 0.004 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 18 | 0.999732 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 4 | 23 | 19 |
| Orthofinder run ID | 4 |
| Orthogroup | 4805 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3324 MKLTAVLVIACSAWTATAGSVYARADLAFKKNAKPCGKSFAAKLHDTAHCILFFIPQGITHPEDNQHFHNCCFGI DRGPK* |
| Coding | >Hirsu2|3324 ATGAAGCTCACCGCCGTTCTCGTCATCGCCTGCTCCGCGTGGACGGCCACTGCCGGATCTGTATATGCGCGAGCA GATCTGGCATTCAAGAAGAATGCTAAACCATGCGGAAAGTCTTTCGCCGCGAAACTTCACGATACCGCTCACTGC ATCCTCTTTTTCATTCCCCAAGGCATCACGCATCCGGAAGATAACCAGCATTTCCACAACTGCTGCTTCGGCATC GACAGAGGCCCAAAGTAA |
| Transcript | >Hirsu2|3324 ATGAAGCTCACCGCCGTTCTCGTCATCGCCTGCTCCGCGTGGACGGCCACTGCCGGATCTGTATATGCGCGAGCA GATCTGGCATTCAAGAAGAATGCTAAACCATGCGGAAAGTCTTTCGCCGCGAAACTTCACGATACCGCTCACTGC ATCCTCTTTTTCATTCCCCAAGGCATCACGCATCCGGAAGATAACCAGCATTTCCACAACTGCTGCTTCGGCATC GACAGAGGCCCAAAGTAA |
| Gene | >Hirsu2|3324 ATGAAGCTCACCGCCGTTCTCGTCATCGCCTGCTCCGCGTGGACGGCCACTGCCGGATCTGTATATGCGCGAGCA GATCTGGCATTCAAGAAGAATGCTAAACCATGCGGAAAGTCTTTCGCCGCGAAACTTCACGATACCGCTCACTGC ATCCTCTTTTTCATTCCCCAAGGCATCACGCATCCGGAAGATAACCAGCATTTCCACAACTGCTGCTTCGGCATC GACAGAGGCCCAAAGTAA |