Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3316
Gene name
LocationContig_1856:3350..4599
Strand+
Gene length (bp)1249
Transcript length (bp)1131
Coding sequence length (bp)1131
Protein length (aa) 377

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04116 FA_hydroxylase Fatty acid hydroxylase superfamily 2.0E-23 221 356

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P38992|SUR2_YEAST Sphingolipid C4-hydroxylase SUR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUR2 PE=1 SV=1 37 370 3.0E-87
sp|O94298|SUR2_SCHPO Sphingolipid C4-hydroxylase sur2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sur2 PE=3 SV=1 56 364 6.0E-81
sp|Q9AST3|SBH2_ARATH Sphinganine C4-monooxygenase 2 OS=Arabidopsis thaliana GN=SBH2 PE=1 SV=1 50 356 1.0E-60
sp|Q8VYI1|SBH1_ARATH Sphinganine C4-monooxygenase 1 OS=Arabidopsis thaliana GN=SBH1 PE=1 SV=1 188 356 4.0E-58
sp|Q6UGB2|MSMO1_PIG Methylsterol monooxygenase 1 OS=Sus scrofa GN=MSMO1 PE=2 SV=1 221 373 9.0E-16
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Swissprot ID Swissprot Description Start End E-value
sp|P38992|SUR2_YEAST Sphingolipid C4-hydroxylase SUR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUR2 PE=1 SV=1 37 370 3.0E-87
sp|O94298|SUR2_SCHPO Sphingolipid C4-hydroxylase sur2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sur2 PE=3 SV=1 56 364 6.0E-81
sp|Q9AST3|SBH2_ARATH Sphinganine C4-monooxygenase 2 OS=Arabidopsis thaliana GN=SBH2 PE=1 SV=1 50 356 1.0E-60
sp|Q8VYI1|SBH1_ARATH Sphinganine C4-monooxygenase 1 OS=Arabidopsis thaliana GN=SBH1 PE=1 SV=1 188 356 4.0E-58
sp|Q6UGB2|MSMO1_PIG Methylsterol monooxygenase 1 OS=Sus scrofa GN=MSMO1 PE=2 SV=1 221 373 9.0E-16
sp|Q9CRA4|MSMO1_MOUSE Methylsterol monooxygenase 1 OS=Mus musculus GN=Msmo1 PE=1 SV=1 202 356 1.0E-15
sp|Q5R574|MSMO1_PONAB Methylsterol monooxygenase 1 OS=Pongo abelii GN=MSMO1 PE=2 SV=1 221 375 2.0E-15
sp|Q15800|MSMO1_HUMAN Methylsterol monooxygenase 1 OS=Homo sapiens GN=MSMO1 PE=1 SV=1 221 375 2.0E-15
sp|Q4R4Q4|MSMO1_MACFA Methylsterol monooxygenase 1 OS=Macaca fascicularis GN=MSMO1 PE=2 SV=1 221 356 2.0E-14
sp|Q5ZLL6|MSMO1_CHICK Methylsterol monooxygenase 1 OS=Gallus gallus GN=MSMO1 PE=2 SV=1 219 376 4.0E-14
sp|O35532|MSMO1_RAT Methylsterol monooxygenase 1 OS=Rattus norvegicus GN=Msmo1 PE=2 SV=1 226 356 4.0E-14
sp|Q7ZW77|MSMO1_DANRE Methylsterol monooxygenase 1 OS=Danio rerio GN=msmo1 PE=2 SV=1 219 356 1.0E-13
sp|Q9UUH4|MSMO_SCHPO Methylsterol monooxygenase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erg25 PE=3 SV=1 225 376 5.0E-13
sp|Q5PRC0|CH25H_DANRE Cholesterol 25-hydroxylase-like protein OS=Danio rerio GN=ch25h PE=2 SV=1 222 356 5.0E-13
sp|Q1LX59|C2512_DANRE Cholesterol 25-hydroxylase-like protein 1, member 2 OS=Danio rerio GN=ch25hl1.2 PE=3 SV=1 231 363 2.0E-12
sp|Q8VWZ8|SMO22_ARATH Methylsterol monooxygenase 2-2 OS=Arabidopsis thaliana GN=SMO2-2 PE=2 SV=1 185 374 5.0E-12
sp|Q4QQV7|CH25H_RAT Cholesterol 25-hydroxylase OS=Rattus norvegicus GN=Ch25h PE=2 SV=1 194 367 8.0E-12
sp|Q9ZW22|SMO21_ARATH Methylsterol monooxygenase 2-1 OS=Arabidopsis thaliana GN=SMO2-1 PE=2 SV=2 190 365 1.0E-11
sp|Q55D54|MSMOB_DICDI Putative methylsterol monooxygenase DDB_G0269788 OS=Dictyostelium discoideum GN=DDB_G0269788 PE=3 SV=1 215 376 4.0E-11
sp|P53045|MSMO_YEAST Methylsterol monooxygenase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG25 PE=1 SV=1 225 369 5.0E-11
sp|Q9Z0F5|CH25H_MOUSE Cholesterol 25-hydroxylase OS=Mus musculus GN=Ch25h PE=1 SV=1 197 367 5.0E-11
sp|O59933|MSMO_CANAL Methylsterol monooxygenase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ERG25 PE=3 SV=1 221 376 2.0E-10
sp|Q4G1G8|CH25H_PIG Cholesterol 25-hydroxylase OS=Sus scrofa GN=CH25H PE=2 SV=1 193 356 5.0E-10
sp|Q8L7W5|SMO11_ARATH Methylsterol monooxygenase 1-1 OS=Arabidopsis thaliana GN=SMO1-1 PE=1 SV=1 219 376 1.0E-09
sp|Q1EC69|SMO12_ARATH Methylsterol monooxygenase 1-2 OS=Arabidopsis thaliana GN=SMO1-2 PE=2 SV=1 219 374 1.0E-09
sp|O95992|CH25H_HUMAN Cholesterol 25-hydroxylase OS=Homo sapiens GN=CH25H PE=1 SV=1 235 356 1.0E-08
sp|A8WGT1|C25L2_DANRE Cholesterol 25-hydroxylase-like protein 2 OS=Danio rerio GN=ch25hl2 PE=2 SV=1 218 371 1.0E-08
sp|Q55D52|MSMOA_DICDI Putative methylsterol monooxygenase DDB_G0270946 OS=Dictyostelium discoideum GN=DDB_G0270946 PE=3 SV=2 218 376 6.0E-08
sp|Q9GKT2|FXDC2_MACFA Fatty acid hydroxylase domain-containing protein 2 OS=Macaca fascicularis GN=FAXDC2 PE=2 SV=1 232 338 9.0E-07
sp|Q20027|C25HL_CAEEL Cholesterol 25-hydroxylase-like protein OS=Caenorhabditis elegans GN=F35C8.5 PE=1 SV=1 223 355 2.0E-06
sp|Q96IV6|FXDC2_HUMAN Fatty acid hydroxylase domain-containing protein 2 OS=Homo sapiens GN=FAXDC2 PE=2 SV=1 232 338 4.0E-06
sp|Q618G2|C25HL_CAEBR Cholesterol 25-hydroxylase-like protein OS=Caenorhabditis briggsae GN=CBG14675 PE=3 SV=1 223 370 9.0E-06
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GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0008610 lipid biosynthetic process Yes
GO:0005506 iron ion binding Yes
GO:0055114 oxidation-reduction process Yes
GO:0046872 metal ion binding No
GO:0008152 metabolic process No
GO:0043169 cation binding No
GO:0008150 biological_process No
GO:0009058 biosynthetic process No
GO:0043167 ion binding No
GO:1901576 organic substance biosynthetic process No
GO:0003674 molecular_function No
GO:0071704 organic substance metabolic process No
GO:0006629 lipid metabolic process No
GO:0044238 primary metabolic process No
GO:0003824 catalytic activity No
GO:0046914 transition metal ion binding No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 41 0.5

Transmembrane Domains

Domain # Start End Length
1 53 75 22
2 209 231 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3316
MVNHTSSGPSDASLSPPLAAAAMANQSLFEAALPPLPAYSLEPTGDVFACISDFWLSLLLPVAAYWALSLLFHAI
DVLDLFPQYRLHTPDEILRRNHASRYEVARDVVIQQLIQVVTGAALAMTEPPEMAGKADYDVAVWATRLRLAQRA
LPALLGLLGLNASAISKSMSASHPLLAGALAGGHYPFLAGADAAAPPAFAPWELTAARLIYHLVVPALQFFAAVF
ILDTWQYFLHRLMHMNRWMYTTFHSRHHRLYVPYAYGALYNHPFEGFLLDTLGAGIAFKLTGMTLRQGTCFFTFS
TIKTIDDHCGYAFPWDPLQLITSNNAAYHDIHHQTWGIKANFSQPFFTFWDSLLGTKYKGPRSDRLADRKRLQQK
E*
Coding >Hirsu2|3316
ATGGTCAACCACACGTCCTCTGGCCCTTCGGACGCTTCCCTCTCGCCCCCGCTCGCCGCCGCCGCCATGGCCAAC
CAGAGCCTGTTCGAGGCGGCCCTGCCGCCGCTGCCGGCCTACAGCCTGGAGCCGACGGGCGACGTCTTCGCCTGC
ATCTCCGACTTCTGGCTCTCGCTGCTGCTGCCCGTCGCCGCCTACTGGGCCCTGTCGCTCCTGTTCCACGCCATC
GACGTGCTCGACCTGTTCCCGCAGTACCGGCTGCACACGCCCGACGAGATCCTGCGCCGCAACCACGCCAGCCGG
TACGAGGTGGCGCGCGACGTCGTCATCCAGCAGCTCATCCAGGTCGTCACCGGCGCCGCCCTGGCCATGACGGAG
CCGCCCGAGATGGCCGGCAAGGCCGACTACGACGTGGCCGTCTGGGCCACCCGCCTGCGCCTCGCCCAGCGCGCC
CTGCCCGCCCTGCTCGGCCTGCTCGGCCTCAACGCCAGCGCCATCTCCAAGAGCATGTCCGCCTCGCACCCGCTG
CTGGCCGGCGCCCTGGCCGGCGGCCACTACCCCTTCCTGGCCGGCGCCGACGCCGCCGCCCCGCCGGCCTTTGCC
CCGTGGGAGCTGACGGCCGCCCGCCTCATCTACCACCTCGTCGTCCCCGCCCTGCAGTTCTTCGCCGCCGTCTTC
ATCCTCGACACCTGGCAGTACTTTCTCCACCGCCTCATGCACATGAACCGCTGGATGTACACGACCTTCCACTCG
AGACACCACCGTCTGTACGTGCCCTACGCGTACGGCGCCCTCTACAACCACCCCTTCGAGGGCTTCCTGCTCGAC
ACGCTCGGCGCCGGCATCGCGTTCAAGCTCACGGGCATGACGCTGCGCCAGGGCACCTGCTTCTTCACCTTCTCG
ACCATCAAGACCATCGACGACCACTGCGGCTACGCCTTTCCCTGGGACCCCCTGCAGCTGATCACGAGCAACAAC
GCGGCCTACCACGACATCCACCACCAGACGTGGGGCATCAAGGCCAACTTCTCCCAGCCCTTCTTCACCTTCTGG
GACTCGCTCCTCGGCACCAAGTACAAGGGCCCCCGCTCCGACCGGCTGGCGGACAGGAAGCGCCTGCAGCAGAAG
GAATAG
Transcript >Hirsu2|3316
ATGGTCAACCACACGTCCTCTGGCCCTTCGGACGCTTCCCTCTCGCCCCCGCTCGCCGCCGCCGCCATGGCCAAC
CAGAGCCTGTTCGAGGCGGCCCTGCCGCCGCTGCCGGCCTACAGCCTGGAGCCGACGGGCGACGTCTTCGCCTGC
ATCTCCGACTTCTGGCTCTCGCTGCTGCTGCCCGTCGCCGCCTACTGGGCCCTGTCGCTCCTGTTCCACGCCATC
GACGTGCTCGACCTGTTCCCGCAGTACCGGCTGCACACGCCCGACGAGATCCTGCGCCGCAACCACGCCAGCCGG
TACGAGGTGGCGCGCGACGTCGTCATCCAGCAGCTCATCCAGGTCGTCACCGGCGCCGCCCTGGCCATGACGGAG
CCGCCCGAGATGGCCGGCAAGGCCGACTACGACGTGGCCGTCTGGGCCACCCGCCTGCGCCTCGCCCAGCGCGCC
CTGCCCGCCCTGCTCGGCCTGCTCGGCCTCAACGCCAGCGCCATCTCCAAGAGCATGTCCGCCTCGCACCCGCTG
CTGGCCGGCGCCCTGGCCGGCGGCCACTACCCCTTCCTGGCCGGCGCCGACGCCGCCGCCCCGCCGGCCTTTGCC
CCGTGGGAGCTGACGGCCGCCCGCCTCATCTACCACCTCGTCGTCCCCGCCCTGCAGTTCTTCGCCGCCGTCTTC
ATCCTCGACACCTGGCAGTACTTTCTCCACCGCCTCATGCACATGAACCGCTGGATGTACACGACCTTCCACTCG
AGACACCACCGTCTGTACGTGCCCTACGCGTACGGCGCCCTCTACAACCACCCCTTCGAGGGCTTCCTGCTCGAC
ACGCTCGGCGCCGGCATCGCGTTCAAGCTCACGGGCATGACGCTGCGCCAGGGCACCTGCTTCTTCACCTTCTCG
ACCATCAAGACCATCGACGACCACTGCGGCTACGCCTTTCCCTGGGACCCCCTGCAGCTGATCACGAGCAACAAC
GCGGCCTACCACGACATCCACCACCAGACGTGGGGCATCAAGGCCAACTTCTCCCAGCCCTTCTTCACCTTCTGG
GACTCGCTCCTCGGCACCAAGTACAAGGGCCCCCGCTCCGACCGGCTGGCGGACAGGAAGCGCCTGCAGCAGAAG
GAATAG
Gene >Hirsu2|3316
ATGGTCAACCACACGTCCTCTGGCCCTTCGGACGCTTCCCTCTCGCCCCCGCTCGCCGCCGCCGCCATGGCCAAC
CAGAGCCTGTTCGAGGCGGCCCTGCCGCCGCTGCCGGCCTACAGCCTGGAGCCGACGGGCGACGTCTTCGCCTGC
ATCTCCGACTTCTGGCTCTCGCTGCTGCTGCCCGTCGCCGCCTACTGGGCCCTGTCGCTCCTGTTCCACGCCATC
GACGTGCTCGACCTGTTCCCGCAGTACCGGCTGCACACGCCCGACGAGATCCTGCGCCGCAACCACGCCAGCCGG
TACGAGGTGGCGCGCGACGTCGTCATCCAGCAGCTCATCCAGGTCGTCACCGGCGCCGCCCTGGCCATGACGGAG
CCGCCCGAGATGGCCGGCAAGGCCGACTACGACGTGGCCGTCTGGGCCACCCGCCTGCGCCTCGCCCAGCGCGCC
CTGCCCGCCCTGCTCGGCCTGCTCGGCCTCAACGCCAGCGCCATCTCCAAGAGCATGTCCGCCTCGCACCCGCTG
CTGGCCGGCGCCCTGGCCGGCGGCCACTACCCCTTCCTGGCCGGCGCCGACGCCGCCGCCCCGCCGGCCTTTGCC
CCGTGGGAGCTGACGGCCGCCCGCCTCATCTACCACCTCGTCGTCCCCGCCCTGCAGTTCTTCGCCGCCGTCTTC
ATCCTCGACACCTGGCAGTACTTTCTCCACCGCCTCATGCACATGAACCGCTGGATGTACAGTGAGTCGTCCTCT
CCTGCTGCTGGCGTGCGCCTGCGTCCCCGGCCGGGCAGTCGTGCCTTTACCGGACCCGGCGGCTGACGTTTCCCC
TCTCTCTCCCTCTCTCCTCTCCCCTGCAGCGACCTTCCACTCGAGACACCACCGTCTGTACGTGCCCTACGCGTA
CGGCGCCCTCTACAACCACCCCTTCGAGGGCTTCCTGCTCGACACGCTCGGCGCCGGCATCGCGTTCAAGCTCAC
GGGCATGACGCTGCGCCAGGGCACCTGCTTCTTCACCTTCTCGACCATCAAGACCATCGACGACCACTGCGGCTA
CGCCTTTCCCTGGGACCCCCTGCAGCTGATCACGAGCAACAACGCGGCCTACCACGACATCCACCACCAGACGTG
GGGCATCAAGGCCAACTTCTCCCAGCCCTTCTTCACCTTCTGGGACTCGCTCCTCGGCACCAAGTACAAGGGCCC
CCGCTCCGACCGGCTGGCGGACAGGAAGCGCCTGCAGCAGAAGGAATAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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