Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|33
Gene name
LocationContig_100:28327..28683
Strand+
Gene length (bp)356
Transcript length (bp)261
Coding sequence length (bp)261
Protein length (aa) 87

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02953 zf-Tim10_DDP Tim10/DDP family zinc finger 6.0E-20 12 73

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q4I6B0|TIM13_GIBZE Mitochondrial import inner membrane translocase subunit TIM13 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=TIM13 PE=3 SV=1 1 83 1.0E-28
sp|Q7SBR3|TIM13_NEUCR Mitochondrial import inner membrane translocase subunit tim13 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=tim13 PE=1 SV=1 3 83 5.0E-23
sp|Q4X0V2|TIM13_ASPFU Mitochondrial import inner membrane translocase subunit tim13 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=tim13 PE=3 SV=1 6 86 1.0E-15
sp|Q10481|TIM13_SCHPO Mitochondrial import inner membrane translocase subunit tim13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tim13 PE=3 SV=1 2 83 5.0E-14
sp|Q6DGJ3|TIM13_DANRE Mitochondrial import inner membrane translocase subunit Tim13 OS=Danio rerio GN=timm13 PE=3 SV=1 7 83 7.0E-14
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q4I6B0|TIM13_GIBZE Mitochondrial import inner membrane translocase subunit TIM13 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=TIM13 PE=3 SV=1 1 83 1.0E-28
sp|Q7SBR3|TIM13_NEUCR Mitochondrial import inner membrane translocase subunit tim13 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=tim13 PE=1 SV=1 3 83 5.0E-23
sp|Q4X0V2|TIM13_ASPFU Mitochondrial import inner membrane translocase subunit tim13 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=tim13 PE=3 SV=1 6 86 1.0E-15
sp|Q10481|TIM13_SCHPO Mitochondrial import inner membrane translocase subunit tim13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tim13 PE=3 SV=1 2 83 5.0E-14
sp|Q6DGJ3|TIM13_DANRE Mitochondrial import inner membrane translocase subunit Tim13 OS=Danio rerio GN=timm13 PE=3 SV=1 7 83 7.0E-14
sp|Q75F72|TIM13_ASHGO Mitochondrial import inner membrane translocase subunit TIM13 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=TIM13 PE=3 SV=1 3 86 9.0E-14
sp|P62076|TIM13_RAT Mitochondrial import inner membrane translocase subunit Tim13 OS=Rattus norvegicus GN=Timm13 PE=3 SV=1 10 83 1.0E-13
sp|P62075|TIM13_MOUSE Mitochondrial import inner membrane translocase subunit Tim13 OS=Mus musculus GN=Timm13 PE=1 SV=1 10 83 1.0E-13
sp|Q9Y5L4|TIM13_HUMAN Mitochondrial import inner membrane translocase subunit Tim13 OS=Homo sapiens GN=TIMM13 PE=1 SV=1 10 83 1.0E-13
sp|Q6GPY0|TI13A_XENLA Mitochondrial import inner membrane translocase subunit Tim13-A OS=Xenopus laevis GN=timm13-a PE=3 SV=2 7 81 3.0E-13
sp|P53299|TIM13_YEAST Mitochondrial import inner membrane translocase subunit TIM13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TIM13 PE=1 SV=1 6 86 3.0E-13
sp|Q8AVK1|TI13B_XENLA Mitochondrial import inner membrane translocase subunit Tim13-B OS=Xenopus laevis GN=timm13-b PE=3 SV=1 7 81 4.0E-13
sp|Q6CJX3|TIM13_KLULA Mitochondrial import inner membrane translocase subunit TIM13 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TIM13 PE=3 SV=1 4 86 1.0E-12
sp|Q6BHJ8|TIM13_DEBHA Mitochondrial import inner membrane translocase subunit TIM13 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=TIM13 PE=3 SV=1 19 80 1.0E-12
sp|Q5AF54|TIM13_CANAL Mitochondrial import inner membrane translocase subunit TIM13 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=TIM13 PE=3 SV=1 1 83 2.0E-12
sp|Q6FRE1|TIM13_CANGA Mitochondrial import inner membrane translocase subunit TIM13 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=TIM13 PE=3 SV=1 8 86 7.0E-12
sp|Q9VTN3|TIM13_DROME Mitochondrial import inner membrane translocase subunit Tim13 OS=Drosophila melanogaster GN=Tim13 PE=3 SV=1 9 81 2.0E-11
sp|Q5AZH4|TIM13_EMENI Mitochondrial import inner membrane translocase subunit tim13 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=tim13 PE=3 SV=1 10 76 5.0E-11
sp|Q4PGT2|TIM13_USTMA Mitochondrial import inner membrane translocase subunit TIM13 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=TIM13 PE=3 SV=2 8 77 1.0E-10
sp|P0CS00|TIM13_CRYNJ Mitochondrial import inner membrane translocase subunit TIM13 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=TIM13 PE=3 SV=1 2 82 6.0E-08
sp|P0CS01|TIM13_CRYNB Mitochondrial import inner membrane translocase subunit TIM13 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=TIM13 PE=3 SV=1 2 82 6.0E-08
sp|O45319|TIM13_CAEEL Mitochondrial import inner membrane translocase subunit tim-13 OS=Caenorhabditis elegans GN=tin-13 PE=3 SV=1 8 79 8.0E-08
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Mitochondrion 0.3781 0.09 0.2535 0.0573 0.458 0.0066 0.1921 0.1084 0.2589 0.0249

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup7564
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|778
Ophiocordyceps subramaniannii Hirsu2|33 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|33
MDSSAVTQKVINQVLAESSVANARVLIEKLQDNCFEKCAPRSSSASLSSGDQACVKMCIEKYMAAWNRVNGAYID
RLRQSQGNNEL*
Coding >Hirsu2|33
ATGGACTCCAGCGCCGTCACGCAAAAGGTCATCAACCAGGTCCTTGCCGAGTCGAGCGTCGCCAACGCCCGCGTC
CTCATCGAGAAACTGCAGGACAACTGCTTCGAGAAGTGCGCGCCGCGGTCAAGCTCGGCCTCGTTGTCCAGCGGC
GACCAGGCGTGCGTCAAGATGTGCATTGAGAAGTACATGGCCGCGTGGAACCGCGTCAACGGGGCCTACATCGAC
CGGCTGCGGCAGTCGCAGGGCAACAACGAGCTGTGA
Transcript >Hirsu2|33
ATGGACTCCAGCGCCGTCACGCAAAAGGTCATCAACCAGGTCCTTGCCGAGTCGAGCGTCGCCAACGCCCGCGTC
CTCATCGAGAAACTGCAGGACAACTGCTTCGAGAAGTGCGCGCCGCGGTCAAGCTCGGCCTCGTTGTCCAGCGGC
GACCAGGCGTGCGTCAAGATGTGCATTGAGAAGTACATGGCCGCGTGGAACCGCGTCAACGGGGCCTACATCGAC
CGGCTGCGGCAGTCGCAGGGCAACAACGAGCTGTGA
Gene >Hirsu2|33
ATGGACTCCAGCGCCGTCACGCAAAAGGTCATCAACCAGGTCCTTGCCGAGTCGAGCGTCGCCAACGCCCGCGTC
CTCATCGAGGTAGGAATCATCCTTTACCCCCCCTCTCCCCCTTCCCCCAAGCCGGGCCAAAAGTTTCCAACGGGG
AGGAAGTTGACGGGTTGGCGCGCGCACAGAAACTGCAGGACAACTGCTTCGAGAAGTGCGCGCCGCGGTCAAGCT
CGGCCTCGTTGTCCAGCGGCGACCAGGCGTGCGTCAAGATGTGCATTGAGAAGTACATGGCCGCGTGGAACCGCG
TCAACGGGGCCTACATCGACCGGCTGCGGCAGTCGCAGGGCAACAACGAGCTGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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