Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|3273
Gene name
Location	Contig_184:14346..15855
Strand	+
Gene length (bp)	1509
Transcript length (bp)	1509
Coding sequence length (bp)	1509
Protein length (aa)	503

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00892	EamA	EamA-like transporter family	2.3E-06	222	295

Swissprot hits

[Show all]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O94654\|YGF3_SCHPO	Uncharacterized transporter C405.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC405.03c PE=3 SV=1	188	471	3.0E-11
sp\|Q03730\|YMB8_YEAST	Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML018C PE=1 SV=1	213	479	3.0E-10
sp\|Q8WV83\|S35F5_HUMAN	Solute carrier family 35 member F5 OS=Homo sapiens GN=SLC35F5 PE=2 SV=1	220	465	4.0E-06
sp\|Q5R6J3\|S35F5_PONAB	Solute carrier family 35 member F5 OS=Pongo abelii GN=SLC35F5 PE=2 SV=1	220	465	4.0E-06
sp\|A6QL92\|S35F5_BOVIN	Solute carrier family 35 member F5 OS=Bos taurus GN=SLC35F5 PE=2 SV=1	220	465	4.0E-06

[Show all]

[Show less]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O94654\|YGF3_SCHPO	Uncharacterized transporter C405.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC405.03c PE=3 SV=1	188	471	3.0E-11
sp\|Q03730\|YMB8_YEAST	Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML018C PE=1 SV=1	213	479	3.0E-10
sp\|Q8WV83\|S35F5_HUMAN	Solute carrier family 35 member F5 OS=Homo sapiens GN=SLC35F5 PE=2 SV=1	220	465	4.0E-06
sp\|Q5R6J3\|S35F5_PONAB	Solute carrier family 35 member F5 OS=Pongo abelii GN=SLC35F5 PE=2 SV=1	220	465	4.0E-06
sp\|A6QL92\|S35F5_BOVIN	Solute carrier family 35 member F5 OS=Bos taurus GN=SLC35F5 PE=2 SV=1	220	465	4.0E-06
sp\|Q4R794\|S35F5_MACFA	Solute carrier family 35 member F5 OS=Macaca fascicularis GN=SLC35F5 PE=2 SV=1	220	465	5.0E-06

[Show less]

GO

GO Term	Description	Terminal node
GO:0016021	integral component of membrane	Yes
GO:0016020	membrane	Yes
GO:0005575	cellular_component	No
GO:0031224	intrinsic component of membrane	No
GO:0110165	cellular anatomical entity	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 23	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	119	137	18
2	152	174	22
3	221	243	22
4	253	272	19
5	281	300	19
6	315	337	22
7	358	380	22
8	395	417	22
9	424	446	22
10	451	473	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|3273 MMDSASGGNEERAERPERAQGPDGRASTGSLTAADRPALRRNGRSGTPLLFKAEDHLDANGEAQQSLLWSGDEPA TSIDLDAGDDADDAARRPTFSRRSTMRNRSPLAAAARASARKKYTYAAFFLAVSLVTFAIQTELSSHIQHDLGWD KAYCMMYFTHGSWIVLWPAMLLILRLQKLDEPWPVFWRRHKQVLSSTIAMIELQTLDVFNPSAQRRARPALYLAR TTAFITSALTIAGLSWYVAVSLTTPSDLTAIYNCSAFFAYIFSVPILHEPLRLDKSVAVFIAIVGVLVVAYGDTG DSSGEPGSGPGNTAPGAGSRFVGNLVIGVGSVLYGLYEVLYKRYACPPEGVSPGRGTIFANTFGACIGLFTLTVL WIPLPILHILNIERFELPDASTGWLVLVAVLANATFSGSFLVLISLTSPVLSSVAALLTIFIVALADWFLTGQPL SWAAIIGGSMIIVAFVGLSWSTYREMAEHEARKLAVDLTDSDEDADISPGEP*
Coding	>Hirsu2\|3273 ATGATGGACTCTGCCAGCGGCGGCAACGAGGAGAGGGCAGAGAGGCCGGAGAGGGCACAGGGCCCCGACGGCCGG GCCTCGACGGGCAGCCTCACTGCGGCCGACCGCCCGGCGCTCCGTCGGAATGGCCGGTCCGGCACCCCGCTGCTG TTCAAGGCCGAGGACCACCTCGACGCCAACGGCGAGGCCCAACAGAGCCTCCTCTGGTCGGGCGACGAGCCGGCC ACAAGCATCGATCTCGATGCCGGCGACGACGCCGACGACGCCGCCCGGCGGCCGACCTTCAGCAGGCGCTCCACC ATGCGCAACAGAAGCCCGCTCGCGGCCGCCGCCCGGGCCTCGGCCCGCAAGAAGTACACGTACGCCGCCTTCTTC CTCGCCGTCAGCCTCGTCACCTTCGCCATCCAGACGGAACTCAGCTCGCACATCCAGCACGACCTGGGCTGGGAC AAGGCCTACTGCATGATGTACTTCACCCACGGCTCCTGGATCGTCCTGTGGCCGGCCATGCTCCTCATCCTGCGG CTGCAGAAGCTCGACGAGCCGTGGCCCGTCTTCTGGAGGCGCCATAAGCAGGTGCTCTCCTCCACCATCGCCATG ATCGAGCTGCAGACGCTCGACGTCTTCAACCCGTCGGCCCAGCGCCGCGCCCGGCCCGCCCTGTACCTGGCCCGC ACCACCGCCTTCATCACCTCGGCCCTGACGATAGCCGGCCTGAGCTGGTACGTCGCCGTCAGCCTCACGACGCCC TCGGACCTGACGGCCATCTACAACTGCTCCGCCTTCTTCGCCTACATCTTCTCCGTCCCCATCCTGCACGAGCCG CTGCGCCTCGACAAGTCCGTCGCCGTCTTCATCGCCATCGTCGGCGTCCTGGTCGTGGCCTACGGCGACACGGGC GACAGCTCCGGCGAGCCCGGCTCCGGCCCCGGCAACACGGCGCCGGGCGCGGGCAGCCGCTTCGTCGGCAACCTC GTCATCGGCGTCGGCTCCGTCCTCTACGGCCTGTACGAGGTGCTCTACAAGCGCTACGCCTGCCCGCCCGAGGGC GTCTCCCCCGGCCGCGGCACCATCTTCGCCAACACCTTCGGCGCCTGCATCGGCCTCTTCACCCTCACCGTCCTG TGGATCCCGCTCCCCATCCTCCACATCCTCAACATCGAACGGTTCGAGCTGCCCGACGCCTCGACCGGCTGGCTC GTCCTCGTCGCCGTGCTGGCCAACGCAACCTTTAGCGGCTCGTTCCTCGTCCTCATCTCGCTGACGTCGCCCGTG CTGTCCTCGGTCGCCGCCCTGCTGACCATCTTCATCGTCGCCCTCGCCGACTGGTTCCTGACGGGGCAGCCGCTG AGCTGGGCGGCCATCATCGGCGGATCCATGATCATCGTCGCCTTTGTCGGCCTGAGCTGGAGCACCTACCGCGAG ATGGCCGAGCACGAGGCGCGCAAGCTGGCCGTCGACCTGACCGACAGCGACGAGGATGCCGACATTTCACCGGGC GAACCCTGA
Transcript	>Hirsu2\|3273 ATGATGGACTCTGCCAGCGGCGGCAACGAGGAGAGGGCAGAGAGGCCGGAGAGGGCACAGGGCCCCGACGGCCGG GCCTCGACGGGCAGCCTCACTGCGGCCGACCGCCCGGCGCTCCGTCGGAATGGCCGGTCCGGCACCCCGCTGCTG TTCAAGGCCGAGGACCACCTCGACGCCAACGGCGAGGCCCAACAGAGCCTCCTCTGGTCGGGCGACGAGCCGGCC ACAAGCATCGATCTCGATGCCGGCGACGACGCCGACGACGCCGCCCGGCGGCCGACCTTCAGCAGGCGCTCCACC ATGCGCAACAGAAGCCCGCTCGCGGCCGCCGCCCGGGCCTCGGCCCGCAAGAAGTACACGTACGCCGCCTTCTTC CTCGCCGTCAGCCTCGTCACCTTCGCCATCCAGACGGAACTCAGCTCGCACATCCAGCACGACCTGGGCTGGGAC AAGGCCTACTGCATGATGTACTTCACCCACGGCTCCTGGATCGTCCTGTGGCCGGCCATGCTCCTCATCCTGCGG CTGCAGAAGCTCGACGAGCCGTGGCCCGTCTTCTGGAGGCGCCATAAGCAGGTGCTCTCCTCCACCATCGCCATG ATCGAGCTGCAGACGCTCGACGTCTTCAACCCGTCGGCCCAGCGCCGCGCCCGGCCCGCCCTGTACCTGGCCCGC ACCACCGCCTTCATCACCTCGGCCCTGACGATAGCCGGCCTGAGCTGGTACGTCGCCGTCAGCCTCACGACGCCC TCGGACCTGACGGCCATCTACAACTGCTCCGCCTTCTTCGCCTACATCTTCTCCGTCCCCATCCTGCACGAGCCG CTGCGCCTCGACAAGTCCGTCGCCGTCTTCATCGCCATCGTCGGCGTCCTGGTCGTGGCCTACGGCGACACGGGC GACAGCTCCGGCGAGCCCGGCTCCGGCCCCGGCAACACGGCGCCGGGCGCGGGCAGCCGCTTCGTCGGCAACCTC GTCATCGGCGTCGGCTCCGTCCTCTACGGCCTGTACGAGGTGCTCTACAAGCGCTACGCCTGCCCGCCCGAGGGC GTCTCCCCCGGCCGCGGCACCATCTTCGCCAACACCTTCGGCGCCTGCATCGGCCTCTTCACCCTCACCGTCCTG TGGATCCCGCTCCCCATCCTCCACATCCTCAACATCGAACGGTTCGAGCTGCCCGACGCCTCGACCGGCTGGCTC GTCCTCGTCGCCGTGCTGGCCAACGCAACCTTTAGCGGCTCGTTCCTCGTCCTCATCTCGCTGACGTCGCCCGTG CTGTCCTCGGTCGCCGCCCTGCTGACCATCTTCATCGTCGCCCTCGCCGACTGGTTCCTGACGGGGCAGCCGCTG AGCTGGGCGGCCATCATCGGCGGATCCATGATCATCGTCGCCTTTGTCGGCCTGAGCTGGAGCACCTACCGCGAG ATGGCCGAGCACGAGGCGCGCAAGCTGGCCGTCGACCTGACCGACAGCGACGAGGATGCCGACATTTCACCGGGC GAACCCTGA
Gene	>Hirsu2\|3273 ATGATGGACTCTGCCAGCGGCGGCAACGAGGAGAGGGCAGAGAGGCCGGAGAGGGCACAGGGCCCCGACGGCCGG GCCTCGACGGGCAGCCTCACTGCGGCCGACCGCCCGGCGCTCCGTCGGAATGGCCGGTCCGGCACCCCGCTGCTG TTCAAGGCCGAGGACCACCTCGACGCCAACGGCGAGGCCCAACAGAGCCTCCTCTGGTCGGGCGACGAGCCGGCC ACAAGCATCGATCTCGATGCCGGCGACGACGCCGACGACGCCGCCCGGCGGCCGACCTTCAGCAGGCGCTCCACC ATGCGCAACAGAAGCCCGCTCGCGGCCGCCGCCCGGGCCTCGGCCCGCAAGAAGTACACGTACGCCGCCTTCTTC CTCGCCGTCAGCCTCGTCACCTTCGCCATCCAGACGGAACTCAGCTCGCACATCCAGCACGACCTGGGCTGGGAC AAGGCCTACTGCATGATGTACTTCACCCACGGCTCCTGGATCGTCCTGTGGCCGGCCATGCTCCTCATCCTGCGG CTGCAGAAGCTCGACGAGCCGTGGCCCGTCTTCTGGAGGCGCCATAAGCAGGTGCTCTCCTCCACCATCGCCATG ATCGAGCTGCAGACGCTCGACGTCTTCAACCCGTCGGCCCAGCGCCGCGCCCGGCCCGCCCTGTACCTGGCCCGC ACCACCGCCTTCATCACCTCGGCCCTGACGATAGCCGGCCTGAGCTGGTACGTCGCCGTCAGCCTCACGACGCCC TCGGACCTGACGGCCATCTACAACTGCTCCGCCTTCTTCGCCTACATCTTCTCCGTCCCCATCCTGCACGAGCCG CTGCGCCTCGACAAGTCCGTCGCCGTCTTCATCGCCATCGTCGGCGTCCTGGTCGTGGCCTACGGCGACACGGGC GACAGCTCCGGCGAGCCCGGCTCCGGCCCCGGCAACACGGCGCCGGGCGCGGGCAGCCGCTTCGTCGGCAACCTC GTCATCGGCGTCGGCTCCGTCCTCTACGGCCTGTACGAGGTGCTCTACAAGCGCTACGCCTGCCCGCCCGAGGGC GTCTCCCCCGGCCGCGGCACCATCTTCGCCAACACCTTCGGCGCCTGCATCGGCCTCTTCACCCTCACCGTCCTG TGGATCCCGCTCCCCATCCTCCACATCCTCAACATCGAACGGTTCGAGCTGCCCGACGCCTCGACCGGCTGGCTC GTCCTCGTCGCCGTGCTGGCCAACGCAACCTTTAGCGGCTCGTTCCTCGTCCTCATCTCGCTGACGTCGCCCGTG CTGTCCTCGGTCGCCGCCCTGCTGACCATCTTCATCGTCGCCCTCGCCGACTGGTTCCTGACGGGGCAGCCGCTG AGCTGGGCGGCCATCATCGGCGGATCCATGATCATCGTCGCCTTTGTCGGCCTGAGCTGGAGCACCTACCGCGAG ATGGCCGAGCACGAGGCGCGCAAGCTGGCCGTCGACCTGACCGACAGCGACGAGGATGCCGACATTTCACCGGGC GAACCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail