© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3269 |
| Gene name | |
| Location | Contig_184:6309..7351 |
| Strand | + |
| Gene length (bp) | 1042 |
| Transcript length (bp) | 759 |
| Coding sequence length (bp) | 759 |
| Protein length (aa) | 253 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 33 | 18 |
| 2 | 46 | 68 | 22 |
| 3 | 96 | 118 | 22 |
| 4 | 125 | 147 | 22 |
| 5 | 187 | 206 | 19 |
| 6 | 213 | 235 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3269 MFQYPEQTPAQQYALAVFLPLLATVFVVLRFYARRLQRSELLWDDWLVVFSLFFTYLTSLFMILGTALGNQGQHM DFGPDGRFLINDRYVWFLKMLYAGQLSQALAIGPTKIAVLLLYRRIFRGRAFSIITWLLIAVAAGWTVAFFFANM LECVPVEEAFKNAPGLGGNPRCINAVPMYLSQVYSDVIIDALILAVPIPLVLKLRLPTRQKFAVCGIFLLGIITI ASSCAKMIIFNFVGHELAEEPDVSCNA* |
| Coding | >Hirsu2|3269 ATGTTCCAGTACCCCGAGCAGACGCCCGCCCAGCAGTATGCGCTTGCCGTCTTCCTGCCGCTGCTGGCCACCGTC TTCGTCGTCCTACGCTTCTACGCCCGCCGCCTGCAGAGGAGCGAGCTCCTGTGGGACGACTGGCTCGTCGTCTTC AGCCTGTTCTTCACCTACCTCACCAGCCTCTTCATGATCCTCGGCACCGCGCTCGGCAACCAAGGCCAGCACATG GACTTCGGCCCCGACGGGCGCTTCCTCATCAACGACCGCTACGTCTGGTTCCTCAAGATGCTCTACGCCGGGCAG CTGTCGCAGGCGCTGGCCATCGGCCCGACCAAGATCGCCGTCCTGCTGCTGTACCGGCGCATCTTCCGCGGGCGC GCCTTCAGCATCATCACCTGGCTGCTCATCGCCGTCGCCGCCGGCTGGACCGTCGCCTTCTTCTTCGCCAACATG CTCGAGTGCGTCCCCGTCGAGGAGGCCTTCAAGAACGCGCCCGGCCTCGGCGGCAACCCGCGCTGCATCAACGCC GTGCCCATGTATCTGTCCCAGGTCTACTCCGACGTCATCATCGACGCCCTCATCCTAGCCGTGCCCATCCCCCTC GTGCTCAAGCTTCGCCTTCCCACGAGACAGAAGTTCGCCGTCTGTGGTATCTTCTTGCTCGGCATCATCACCATT GCTTCCAGCTGCGCCAAGATGATCATCTTCAACTTCGTCGGCCACGAATTGGCCGAGGAGCCCGACGTCTCCTGT AATGCCTGA |
| Transcript | >Hirsu2|3269 ATGTTCCAGTACCCCGAGCAGACGCCCGCCCAGCAGTATGCGCTTGCCGTCTTCCTGCCGCTGCTGGCCACCGTC TTCGTCGTCCTACGCTTCTACGCCCGCCGCCTGCAGAGGAGCGAGCTCCTGTGGGACGACTGGCTCGTCGTCTTC AGCCTGTTCTTCACCTACCTCACCAGCCTCTTCATGATCCTCGGCACCGCGCTCGGCAACCAAGGCCAGCACATG GACTTCGGCCCCGACGGGCGCTTCCTCATCAACGACCGCTACGTCTGGTTCCTCAAGATGCTCTACGCCGGGCAG CTGTCGCAGGCGCTGGCCATCGGCCCGACCAAGATCGCCGTCCTGCTGCTGTACCGGCGCATCTTCCGCGGGCGC GCCTTCAGCATCATCACCTGGCTGCTCATCGCCGTCGCCGCCGGCTGGACCGTCGCCTTCTTCTTCGCCAACATG CTCGAGTGCGTCCCCGTCGAGGAGGCCTTCAAGAACGCGCCCGGCCTCGGCGGCAACCCGCGCTGCATCAACGCC GTGCCCATGTATCTGTCCCAGGTCTACTCCGACGTCATCATCGACGCCCTCATCCTAGCCGTGCCCATCCCCCTC GTGCTCAAGCTTCGCCTTCCCACGAGACAGAAGTTCGCCGTCTGTGGTATCTTCTTGCTCGGCATCATCACCATT GCTTCCAGCTGCGCCAAGATGATCATCTTCAACTTCGTCGGCCACGAATTGGCCGAGGAGCCCGACGTCTCCTGT AATGCCTGA |
| Gene | >Hirsu2|3269 ATGTTCCAGTACCCCGAGCAGACGCCCGCCCAGCAGTATGCGCTTGCCGTCTTCCTGCCGCTGCTGGCCACCGTC TTCGTCGTCCTACGCTTCTACGCCCGCCGCCTGCAGAGGAGCGAGCTCCTGTGGGACGACTGGCTCGTCGTCTTC AGCCTGGTAACCTCCCTCCCTCCCTCTCTCTCTCGCGACGGACCGTTGGAAAAGGGCGACAAGGCTCACGCGCGC CCCCAAGTTCTTCACCTACCTCACCAGCCTCTTCATGATCCTCGGCACCGCGCTCGGCAACCAAGGCCAGCACAT GGACTTCGGCCCCGACGGGCGCTTCCTCATCAACGACCGCTACGTCTGGTTCCTCAAGATGCTCTACGCCGGGCA GCTGTCGCAGGCGCTGGCCATCGGCCCGACCAAGATCGCCGTCCTGCTGCTGTACCGGCGCATCTTCCGCGGGCG CGCCTTCAGCATCATCACCTGGCTGCTCATCGCCGTCGCCGCCGGCTGGACCGTCGCCTTCTTCTTCGCCAACAT GCTCGAGTGCGTCCCCGTCGAGGAGGCCTTCAAGAACGCGCCCGGCCTCGGCGGCAACCCGCGCTGCATCAACGC CGTGCCCATGTATCTGTCCCAGGTCTACTCCGACGTCATCATCGACGCCCTCATCCTAGCCGTGCCCATCCCCCT CGGTATGTCTGCCCCTTTTCGTCTTGCCATCACAATCGCCCTCTCCGACGACTGACGAGCCCGCCGGAACAGTGC TCAAGCTTCGCCTTCCCACGAGACAGAAGTTCGCCGTCTGTGGTATCTTCTTGCTCGGCATCATGTGAGAGAACT CCTTCCCCCTTTTTTGCCCTATATTGGCGTGGTGACGTGCCGCGGTTGCGGTCATTGGACGGTCGGCCCTGGAAA ATGGCCTCTTCGCTTTTGCTCTTTTGGATCGAGGCTCACATCCTCCTGCAGCACCATTGCTTCCAGCTGCGCCAA GATGATCATCTTCAACTTCGTCGGCCACGAATTGGCCGAGGAGCCCGACGTCTCCTGTAATGCCTGA |