Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3269
Gene name
LocationContig_184:6309..7351
Strand+
Gene length (bp)1042
Transcript length (bp)759
Coding sequence length (bp)759
Protein length (aa) 253

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.5

Transmembrane Domains

Domain # Start End Length
1 15 33 18
2 46 68 22
3 96 118 22
4 125 147 22
5 187 206 19
6 213 235 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3269
MFQYPEQTPAQQYALAVFLPLLATVFVVLRFYARRLQRSELLWDDWLVVFSLFFTYLTSLFMILGTALGNQGQHM
DFGPDGRFLINDRYVWFLKMLYAGQLSQALAIGPTKIAVLLLYRRIFRGRAFSIITWLLIAVAAGWTVAFFFANM
LECVPVEEAFKNAPGLGGNPRCINAVPMYLSQVYSDVIIDALILAVPIPLVLKLRLPTRQKFAVCGIFLLGIITI
ASSCAKMIIFNFVGHELAEEPDVSCNA*
Coding >Hirsu2|3269
ATGTTCCAGTACCCCGAGCAGACGCCCGCCCAGCAGTATGCGCTTGCCGTCTTCCTGCCGCTGCTGGCCACCGTC
TTCGTCGTCCTACGCTTCTACGCCCGCCGCCTGCAGAGGAGCGAGCTCCTGTGGGACGACTGGCTCGTCGTCTTC
AGCCTGTTCTTCACCTACCTCACCAGCCTCTTCATGATCCTCGGCACCGCGCTCGGCAACCAAGGCCAGCACATG
GACTTCGGCCCCGACGGGCGCTTCCTCATCAACGACCGCTACGTCTGGTTCCTCAAGATGCTCTACGCCGGGCAG
CTGTCGCAGGCGCTGGCCATCGGCCCGACCAAGATCGCCGTCCTGCTGCTGTACCGGCGCATCTTCCGCGGGCGC
GCCTTCAGCATCATCACCTGGCTGCTCATCGCCGTCGCCGCCGGCTGGACCGTCGCCTTCTTCTTCGCCAACATG
CTCGAGTGCGTCCCCGTCGAGGAGGCCTTCAAGAACGCGCCCGGCCTCGGCGGCAACCCGCGCTGCATCAACGCC
GTGCCCATGTATCTGTCCCAGGTCTACTCCGACGTCATCATCGACGCCCTCATCCTAGCCGTGCCCATCCCCCTC
GTGCTCAAGCTTCGCCTTCCCACGAGACAGAAGTTCGCCGTCTGTGGTATCTTCTTGCTCGGCATCATCACCATT
GCTTCCAGCTGCGCCAAGATGATCATCTTCAACTTCGTCGGCCACGAATTGGCCGAGGAGCCCGACGTCTCCTGT
AATGCCTGA
Transcript >Hirsu2|3269
ATGTTCCAGTACCCCGAGCAGACGCCCGCCCAGCAGTATGCGCTTGCCGTCTTCCTGCCGCTGCTGGCCACCGTC
TTCGTCGTCCTACGCTTCTACGCCCGCCGCCTGCAGAGGAGCGAGCTCCTGTGGGACGACTGGCTCGTCGTCTTC
AGCCTGTTCTTCACCTACCTCACCAGCCTCTTCATGATCCTCGGCACCGCGCTCGGCAACCAAGGCCAGCACATG
GACTTCGGCCCCGACGGGCGCTTCCTCATCAACGACCGCTACGTCTGGTTCCTCAAGATGCTCTACGCCGGGCAG
CTGTCGCAGGCGCTGGCCATCGGCCCGACCAAGATCGCCGTCCTGCTGCTGTACCGGCGCATCTTCCGCGGGCGC
GCCTTCAGCATCATCACCTGGCTGCTCATCGCCGTCGCCGCCGGCTGGACCGTCGCCTTCTTCTTCGCCAACATG
CTCGAGTGCGTCCCCGTCGAGGAGGCCTTCAAGAACGCGCCCGGCCTCGGCGGCAACCCGCGCTGCATCAACGCC
GTGCCCATGTATCTGTCCCAGGTCTACTCCGACGTCATCATCGACGCCCTCATCCTAGCCGTGCCCATCCCCCTC
GTGCTCAAGCTTCGCCTTCCCACGAGACAGAAGTTCGCCGTCTGTGGTATCTTCTTGCTCGGCATCATCACCATT
GCTTCCAGCTGCGCCAAGATGATCATCTTCAACTTCGTCGGCCACGAATTGGCCGAGGAGCCCGACGTCTCCTGT
AATGCCTGA
Gene >Hirsu2|3269
ATGTTCCAGTACCCCGAGCAGACGCCCGCCCAGCAGTATGCGCTTGCCGTCTTCCTGCCGCTGCTGGCCACCGTC
TTCGTCGTCCTACGCTTCTACGCCCGCCGCCTGCAGAGGAGCGAGCTCCTGTGGGACGACTGGCTCGTCGTCTTC
AGCCTGGTAACCTCCCTCCCTCCCTCTCTCTCTCGCGACGGACCGTTGGAAAAGGGCGACAAGGCTCACGCGCGC
CCCCAAGTTCTTCACCTACCTCACCAGCCTCTTCATGATCCTCGGCACCGCGCTCGGCAACCAAGGCCAGCACAT
GGACTTCGGCCCCGACGGGCGCTTCCTCATCAACGACCGCTACGTCTGGTTCCTCAAGATGCTCTACGCCGGGCA
GCTGTCGCAGGCGCTGGCCATCGGCCCGACCAAGATCGCCGTCCTGCTGCTGTACCGGCGCATCTTCCGCGGGCG
CGCCTTCAGCATCATCACCTGGCTGCTCATCGCCGTCGCCGCCGGCTGGACCGTCGCCTTCTTCTTCGCCAACAT
GCTCGAGTGCGTCCCCGTCGAGGAGGCCTTCAAGAACGCGCCCGGCCTCGGCGGCAACCCGCGCTGCATCAACGC
CGTGCCCATGTATCTGTCCCAGGTCTACTCCGACGTCATCATCGACGCCCTCATCCTAGCCGTGCCCATCCCCCT
CGGTATGTCTGCCCCTTTTCGTCTTGCCATCACAATCGCCCTCTCCGACGACTGACGAGCCCGCCGGAACAGTGC
TCAAGCTTCGCCTTCCCACGAGACAGAAGTTCGCCGTCTGTGGTATCTTCTTGCTCGGCATCATGTGAGAGAACT
CCTTCCCCCTTTTTTGCCCTATATTGGCGTGGTGACGTGCCGCGGTTGCGGTCATTGGACGGTCGGCCCTGGAAA
ATGGCCTCTTCGCTTTTGCTCTTTTGGATCGAGGCTCACATCCTCCTGCAGCACCATTGCTTCCAGCTGCGCCAA
GATGATCATCTTCAACTTCGTCGGCCACGAATTGGCCGAGGAGCCCGACGTCTCCTGTAATGCCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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