© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3265 |
| Gene name | |
| Location | Contig_1839:4339..4641 |
| Strand | - |
| Gene length (bp) | 302 |
| Transcript length (bp) | 237 |
| Coding sequence length (bp) | 237 |
| Protein length (aa) | 79 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00179 | UQ_con | Ubiquitin-conjugating enzyme | 2.9E-08 | 2 | 69 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74983|MMS2_SCHPO | Ubiquitin-conjugating enzyme spm2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spm2 PE=1 SV=1 | 1 | 77 | 1.0E-25 |
| sp|Q9CAB6|UEV1B_ARATH | Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana GN=UEV1B PE=1 SV=1 | 1 | 75 | 1.0E-23 |
| sp|Q54D06|UBE2V_DICDI | Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum GN=ube2v PE=3 SV=1 | 1 | 77 | 1.0E-23 |
| sp|P53152|MMS2_YEAST | Ubiquitin-conjugating enzyme variant MMS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MMS2 PE=1 SV=1 | 1 | 77 | 2.0E-22 |
| sp|Q93YP0|UEV1A_ARATH | Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana GN=UEV1A PE=1 SV=1 | 1 | 75 | 3.0E-22 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74983|MMS2_SCHPO | Ubiquitin-conjugating enzyme spm2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spm2 PE=1 SV=1 | 1 | 77 | 1.0E-25 |
| sp|Q9CAB6|UEV1B_ARATH | Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana GN=UEV1B PE=1 SV=1 | 1 | 75 | 1.0E-23 |
| sp|Q54D06|UBE2V_DICDI | Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum GN=ube2v PE=3 SV=1 | 1 | 77 | 1.0E-23 |
| sp|P53152|MMS2_YEAST | Ubiquitin-conjugating enzyme variant MMS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MMS2 PE=1 SV=1 | 1 | 77 | 2.0E-22 |
| sp|Q93YP0|UEV1A_ARATH | Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana GN=UEV1A PE=1 SV=1 | 1 | 75 | 3.0E-22 |
| sp|Q9SVD7|UEV1D_ARATH | Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana GN=UEV1D PE=1 SV=1 | 1 | 77 | 2.0E-21 |
| sp|Q5F3Z3|UB2V2_CHICK | Ubiquitin-conjugating enzyme E2 variant 2 OS=Gallus gallus GN=UBE2V2 PE=2 SV=1 | 1 | 78 | 2.0E-21 |
| sp|Q6PEH5|UB2V2_DANRE | Ubiquitin-conjugating enzyme E2 variant 2 OS=Danio rerio GN=ube2v2 PE=2 SV=1 | 1 | 78 | 4.0E-21 |
| sp|Q9SJ44|UEV1C_ARATH | Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana GN=UEV1C PE=1 SV=1 | 1 | 77 | 5.0E-21 |
| sp|Q3SZ52|UB2V1_BOVIN | Ubiquitin-conjugating enzyme E2 variant 1 OS=Bos taurus GN=UBE2V1 PE=2 SV=1 | 1 | 78 | 6.0E-21 |
| sp|Q13404|UB2V1_HUMAN | Ubiquitin-conjugating enzyme E2 variant 1 OS=Homo sapiens GN=UBE2V1 PE=1 SV=2 | 1 | 78 | 6.0E-21 |
| sp|Q7M767|UB2V2_RAT | Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus GN=Ube2v2 PE=1 SV=3 | 1 | 78 | 7.0E-21 |
| sp|Q90879|UB2V1_CHICK | Ubiquitin-conjugating enzyme E2 variant 1 OS=Gallus gallus GN=UBE2V1 PE=2 SV=2 | 1 | 78 | 7.0E-21 |
| sp|Q9CZY3|UB2V1_MOUSE | Ubiquitin-conjugating enzyme E2 variant 1 OS=Mus musculus GN=Ube2v1 PE=1 SV=1 | 1 | 78 | 8.0E-21 |
| sp|Q9D2M8|UB2V2_MOUSE | Ubiquitin-conjugating enzyme E2 variant 2 OS=Mus musculus GN=Ube2v2 PE=1 SV=4 | 1 | 78 | 1.0E-20 |
| sp|Q7ZYP0|UB2V2_XENLA | Ubiquitin-conjugating enzyme E2 variant 2 OS=Xenopus laevis GN=ube2v2 PE=2 SV=1 | 1 | 78 | 3.0E-20 |
| sp|Q5R6C9|UB2V2_PONAB | Ubiquitin-conjugating enzyme E2 variant 2 OS=Pongo abelii GN=UBE2V2 PE=2 SV=1 | 1 | 78 | 3.0E-20 |
| sp|Q15819|UB2V2_HUMAN | Ubiquitin-conjugating enzyme E2 variant 2 OS=Homo sapiens GN=UBE2V2 PE=1 SV=4 | 1 | 78 | 3.0E-20 |
| sp|Q3SZ43|UB2V2_BOVIN | Ubiquitin-conjugating enzyme E2 variant 2 OS=Bos taurus GN=UBE2V2 PE=2 SV=3 | 1 | 78 | 3.0E-20 |
| sp|Q5R4Z6|UB2V1_PONAB | Ubiquitin-conjugating enzyme E2 variant 1 OS=Pongo abelii GN=UBE2V1 PE=2 SV=1 | 1 | 78 | 2.0E-19 |
| sp|O45495|UB2V1_CAEEL | Ubiquitin-conjugating enzyme E2 variant 1 OS=Caenorhabditis elegans GN=uev-1 PE=1 SV=1 | 1 | 77 | 2.0E-14 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3265 MHCGDQYPDEPPTIQFVSQVNLPCVNPRNGVVDPSQLPCLAQWKRGNTMETVLIELRRYMAAPTNKKIPQPPEGS TYS* |
| Coding | >Hirsu2|3265 ATGCACTGCGGCGACCAGTACCCGGACGAGCCGCCGACGATCCAGTTCGTCAGCCAGGTCAACCTTCCGTGCGTG AACCCGCGCAACGGCGTCGTCGACCCGAGCCAGCTGCCCTGCCTGGCCCAGTGGAAGCGCGGAAACACGATGGAG ACGGTCCTGATCGAGCTGCGGAGATACATGGCGGCGCCCACCAACAAGAAGATCCCGCAGCCGCCCGAGGGCTCG ACATACTCATGA |
| Transcript | >Hirsu2|3265 ATGCACTGCGGCGACCAGTACCCGGACGAGCCGCCGACGATCCAGTTCGTCAGCCAGGTCAACCTTCCGTGCGTG AACCCGCGCAACGGCGTCGTCGACCCGAGCCAGCTGCCCTGCCTGGCCCAGTGGAAGCGCGGAAACACGATGGAG ACGGTCCTGATCGAGCTGCGGAGATACATGGCGGCGCCCACCAACAAGAAGATCCCGCAGCCGCCCGAGGGCTCG ACATACTCATGA |
| Gene | >Hirsu2|3265 ATGCACTGCGGCGACCAGTACCCGGACGAGCCGCCGACGATCCAGTTCGTCAGCCAGGTCAACCTTCCGTGCGTG AACCCGCGCAACGGCGTCGTCGACCCGAGCCAGCTGCCCTGCCTGGCCCAGTGGAAGCGCGGAAACACGATGGAG ACGGTCCTGATCGAGCTGCGGAGGTAAGGGGCCTCCAACTCCCCCTTCCCGTGAGCCCGGGCCGCTGACGGTGGT CTCTCGCGTGCAGATACATGGCGGCGCCCACCAACAAGAAGATCCCGCAGCCGCCCGAGGGCTCGACATACTCAT GA |