Protein ID | Hirsu2|3258 |
Gene name | |
Location | Contig_1836:2439..4637 |
Strand | + |
Gene length (bp) | 2198 |
Transcript length (bp) | 2058 |
Coding sequence length (bp) | 2058 |
Protein length (aa) | 686 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 57 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 25 | 47 | 22 |
2 | 85 | 107 | 22 |
3 | 117 | 139 | 22 |
4 | 146 | 168 | 22 |
5 | 584 | 606 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3258 MVKKAAAKADGESGLVVLWHRLDAVSRLVLLLGSPLLALALLALLLFWSESMRATAAGAAEPASSLWTRLVEANW APRIVTVCTAVMRVVIALQASLVTAMVAAMVLERIGACLLYAPFLSIVRALPVAPTNLLFYYKAFPFGRRVLSFL FYGLVVGETLVTVAAQFLSTIYLSDFRDSPYVGPTVAIKVGANRSSATRSWLPDTVSWTFAELSEPFRAGPNFHD TGRAFRALLPFEDAARRTRLRRYRGPAVVFDARVVCVAPDLANLTVTNQGPEEMLARGRVAVDFAGVPGLRQPSG KTGYDDFTCRLPDTLINIPGRFRDETIERQTSICRHDSNAGVVADDGWVGSAVLNDPARALGYRLAMVFEFPLPL PPALRRFDVGRTSSLDLVRTDGPWQVARLGPEGLDLRISSCLVNYDARLGEVYMHSAWEGQEPGVSWEEKTDRWD SEASRRQLGASTTPESLAHRGLLALEPQRPAPSLDALWTLNIYASFAGVVGREPFSVSGWALTTRGTSFLDSVRA AVFHDTLASTGSPALAVQALVTRINQVAYYGRSYAADTAATAVFAATASVPARWTGFVAAAALVAIHLLLVAAAA ALFLCLTRRSRVGDAWQAVAQVVSPDTLPLLERAGSVKGGGGQLRRRAGAMRRARLRRRPDGRVALDVRESDEGR RRDAEARAER* |
Coding | >Hirsu2|3258 ATGGTCAAGAAGGCGGCCGCCAAGGCGGACGGCGAGAGCGGCCTCGTGGTCCTGTGGCACCGCCTCGACGCCGTC AGCCGCCTCGTCCTCCTCCTCGGCTCGCCCCTCCTCGCCCTCGCCCTCCTCGCCCTCCTCCTCTTCTGGAGCGAG TCGATGCGGGCGACGGCGGCCGGCGCGGCCGAGCCGGCGTCGTCGCTCTGGACGCGTCTCGTCGAGGCCAACTGG GCCCCCCGGATCGTGACGGTGTGCACGGCCGTGATGCGCGTCGTCATCGCCTTGCAGGCGAGCCTGGTGACGGCC ATGGTCGCGGCCATGGTCCTCGAGCGCATCGGCGCCTGCCTGCTCTACGCGCCCTTCCTGTCCATCGTCAGGGCC CTCCCCGTCGCCCCGACCAACCTCCTCTTCTACTACAAGGCCTTCCCGTTCGGGCGCCGGGTCCTGTCCTTTCTC TTCTACGGCCTCGTCGTCGGCGAGACGCTCGTCACCGTCGCCGCCCAGTTCCTCTCCACCATCTACCTGTCCGAC TTCCGGGACAGCCCGTATGTCGGCCCGACGGTCGCGATCAAGGTCGGCGCCAACCGGTCCTCCGCCACAAGGTCC TGGCTGCCCGACACGGTGAGCTGGACCTTTGCCGAGCTCTCGGAGCCGTTCCGCGCCGGCCCCAACTTCCACGAC ACGGGCCGCGCCTTTCGCGCCCTGCTGCCGTTCGAGGACGCGGCGCGGCGGACAAGGCTTCGCCGGTACCGCGGC CCGGCCGTCGTCTTCGACGCCCGCGTCGTCTGCGTCGCGCCCGACCTGGCCAACCTGACCGTCACCAACCAGGGG CCGGAGGAGATGCTGGCACGTGGCCGCGTCGCCGTCGACTTCGCCGGCGTGCCCGGCCTGCGGCAGCCAAGCGGG AAGACGGGATACGACGACTTCACCTGCCGACTCCCGGACACGCTCATCAACATACCCGGGCGATTTCGCGACGAG ACGATCGAGCGGCAGACGAGCATATGCAGGCACGACTCCAACGCAGGGGTGGTGGCGGACGATGGCTGGGTCGGC AGCGCTGTGCTCAACGACCCGGCCCGCGCGCTCGGCTACAGGCTAGCAATGGTCTTTGAATTCCCTCTCCCGCTC CCCCCGGCCTTGCGGCGGTTCGACGTTGGCAGGACGAGCAGCCTCGACCTGGTCCGCACGGACGGCCCTTGGCAG GTGGCGAGGCTGGGGCCCGAAGGCCTCGATCTGCGCATCTCGTCCTGCCTCGTCAACTACGACGCCCGGCTGGGC GAGGTGTACATGCACAGCGCGTGGGAGGGCCAGGAGCCCGGCGTGTCGTGGGAGGAGAAGACGGACCGTTGGGAC TCGGAGGCGAGCCGGCGCCAGCTGGGCGCGTCGACGACGCCCGAGAGTCTCGCTCACCGCGGCTTGCTCGCCCTG GAGCCTCAGCGGCCGGCCCCGTCCCTCGACGCGCTCTGGACGCTAAACATATACGCCTCCTTCGCCGGCGTCGTC GGCCGCGAGCCCTTCTCCGTCTCCGGCTGGGCCCTGACGACGCGCGGGACGTCGTTCCTGGACAGCGTCCGCGCG GCCGTCTTCCACGACACGCTGGCCTCGACCGGCAGCCCGGCCCTGGCGGTGCAGGCGCTCGTGACGAGGATAAAC CAGGTCGCCTACTACGGCCGGAGCTACGCGGCCGACACGGCCGCCACCGCCGTCTTCGCCGCCACTGCCTCGGTG CCGGCGCGCTGGACCGGCTTCGTCGCCGCCGCCGCCCTCGTCGCCATCCACCTGCTCCTCGTCGCCGCCGCCGCC GCGCTCTTCCTCTGTCTCACCCGCCGCTCCCGCGTCGGCGACGCGTGGCAGGCCGTCGCGCAGGTCGTCTCGCCC GACACGCTGCCGCTGCTCGAGCGCGCCGGCTCCGTCAAGGGGGGCGGGGGTCAGCTCCGGCGTCGGGCCGGCGCC ATGCGTCGCGCCCGCCTCCGGCGCCGGCCCGACGGACGCGTCGCCCTCGACGTGCGGGAGTCGGACGAAGGACGA AGACGCGACGCCGAGGCACGCGCGGAACGATAG |
Transcript | >Hirsu2|3258 ATGGTCAAGAAGGCGGCCGCCAAGGCGGACGGCGAGAGCGGCCTCGTGGTCCTGTGGCACCGCCTCGACGCCGTC AGCCGCCTCGTCCTCCTCCTCGGCTCGCCCCTCCTCGCCCTCGCCCTCCTCGCCCTCCTCCTCTTCTGGAGCGAG TCGATGCGGGCGACGGCGGCCGGCGCGGCCGAGCCGGCGTCGTCGCTCTGGACGCGTCTCGTCGAGGCCAACTGG GCCCCCCGGATCGTGACGGTGTGCACGGCCGTGATGCGCGTCGTCATCGCCTTGCAGGCGAGCCTGGTGACGGCC ATGGTCGCGGCCATGGTCCTCGAGCGCATCGGCGCCTGCCTGCTCTACGCGCCCTTCCTGTCCATCGTCAGGGCC CTCCCCGTCGCCCCGACCAACCTCCTCTTCTACTACAAGGCCTTCCCGTTCGGGCGCCGGGTCCTGTCCTTTCTC TTCTACGGCCTCGTCGTCGGCGAGACGCTCGTCACCGTCGCCGCCCAGTTCCTCTCCACCATCTACCTGTCCGAC TTCCGGGACAGCCCGTATGTCGGCCCGACGGTCGCGATCAAGGTCGGCGCCAACCGGTCCTCCGCCACAAGGTCC TGGCTGCCCGACACGGTGAGCTGGACCTTTGCCGAGCTCTCGGAGCCGTTCCGCGCCGGCCCCAACTTCCACGAC ACGGGCCGCGCCTTTCGCGCCCTGCTGCCGTTCGAGGACGCGGCGCGGCGGACAAGGCTTCGCCGGTACCGCGGC CCGGCCGTCGTCTTCGACGCCCGCGTCGTCTGCGTCGCGCCCGACCTGGCCAACCTGACCGTCACCAACCAGGGG CCGGAGGAGATGCTGGCACGTGGCCGCGTCGCCGTCGACTTCGCCGGCGTGCCCGGCCTGCGGCAGCCAAGCGGG AAGACGGGATACGACGACTTCACCTGCCGACTCCCGGACACGCTCATCAACATACCCGGGCGATTTCGCGACGAG ACGATCGAGCGGCAGACGAGCATATGCAGGCACGACTCCAACGCAGGGGTGGTGGCGGACGATGGCTGGGTCGGC AGCGCTGTGCTCAACGACCCGGCCCGCGCGCTCGGCTACAGGCTAGCAATGGTCTTTGAATTCCCTCTCCCGCTC CCCCCGGCCTTGCGGCGGTTCGACGTTGGCAGGACGAGCAGCCTCGACCTGGTCCGCACGGACGGCCCTTGGCAG GTGGCGAGGCTGGGGCCCGAAGGCCTCGATCTGCGCATCTCGTCCTGCCTCGTCAACTACGACGCCCGGCTGGGC GAGGTGTACATGCACAGCGCGTGGGAGGGCCAGGAGCCCGGCGTGTCGTGGGAGGAGAAGACGGACCGTTGGGAC TCGGAGGCGAGCCGGCGCCAGCTGGGCGCGTCGACGACGCCCGAGAGTCTCGCTCACCGCGGCTTGCTCGCCCTG GAGCCTCAGCGGCCGGCCCCGTCCCTCGACGCGCTCTGGACGCTAAACATATACGCCTCCTTCGCCGGCGTCGTC GGCCGCGAGCCCTTCTCCGTCTCCGGCTGGGCCCTGACGACGCGCGGGACGTCGTTCCTGGACAGCGTCCGCGCG GCCGTCTTCCACGACACGCTGGCCTCGACCGGCAGCCCGGCCCTGGCGGTGCAGGCGCTCGTGACGAGGATAAAC CAGGTCGCCTACTACGGCCGGAGCTACGCGGCCGACACGGCCGCCACCGCCGTCTTCGCCGCCACTGCCTCGGTG CCGGCGCGCTGGACCGGCTTCGTCGCCGCCGCCGCCCTCGTCGCCATCCACCTGCTCCTCGTCGCCGCCGCCGCC GCGCTCTTCCTCTGTCTCACCCGCCGCTCCCGCGTCGGCGACGCGTGGCAGGCCGTCGCGCAGGTCGTCTCGCCC GACACGCTGCCGCTGCTCGAGCGCGCCGGCTCCGTCAAGGGGGGCGGGGGTCAGCTCCGGCGTCGGGCCGGCGCC ATGCGTCGCGCCCGCCTCCGGCGCCGGCCCGACGGACGCGTCGCCCTCGACGTGCGGGAGTCGGACGAAGGACGA AGACGCGACGCCGAGGCACGCGCGGAACGATAG |
Gene | >Hirsu2|3258 ATGGTCAAGAAGGCGGCCGTGGCCACGCATAACCGACCTTGCTCCCTCCGCTCCTTACTGCGATTCATCGGAACA GCGAACAAACACGATGCCGCAAAACAGTGCCCGGGCCTCGAAGGCTCGGCGCCATCCCTCCCCTTCGAGCTCCGA GGCCGAAGGCCAAGGCGGACGGCGAGAGCGGCCTCGTGGTCCTGTGGCACCGCCTCGACGCCGTCAGCCGCCTCG TCCTCCTCCTCGGCTCGCCCCTCCTCGCCCTCGCCCTCCTCGCCCTCCTCCTCTTCTGGAGCGAGTCGATGCGGG CGACGGCGGCCGGCGCGGCCGAGCCGGCGTCGTCGCTCTGGACGCGTCTCGTCGAGGCCAACTGGGCCCCCCGGA TCGTGACGGTGTGCACGGCCGTGATGCGCGTCGTCATCGCCTTGCAGGCGAGCCTGGTGACGGCCATGGTCGCGG CCATGGTCCTCGAGCGCATCGGCGCCTGCCTGCTCTACGCGCCCTTCCTGTCCATCGTCAGGGCCCTCCCCGTCG CCCCGACCAACCTCCTCTTCTACTACAAGGCCTTCCCGTTCGGGCGCCGGGTCCTGTCCTTTCTCTTCTACGGCC TCGTCGTCGGCGAGACGCTCGTCACCGTCGCCGCCCAGTTCCTCTCCACCATCTACCTGTCCGACTTCCGGGACA GCCCGTATGTCGGCCCGACGGTCGCGATCAAGGTCGGCGCCAACCGGTCCTCCGCCACAAGGTCCTGGCTGCCCG ACACGGTGAGCTGGACCTTTGCCGAGCTCTCGGAGCCGTTCCGCGCCGGCCCCAACTTCCACGACACGGGCCGCG CCTTTCGCGCCCTGCTGCCGTTCGAGGACGCGGCGCGGCGGACAAGGCTTCGCCGGTACCGCGGCCCGGCCGTCG TCTTCGACGCCCGCGTCGTCTGCGTCGCGCCCGACCTGGCCAACCTGACCGTCACCAACCAGGGGCCGGAGGAGA TGCTGGCACGTGGCCGCGTCGCCGTCGACTTCGCCGGCGTGCCCGGCCTGCGGCAGCCAAGCGGGAAGACGGGAT ACGACGACTTCACCTGCCGACTCCCGGACACGCTCATCAACATACCCGGGCGATTTCGCGACGAGACGATCGAGC GGCAGACGAGCATATGCAGGCACGACTCCAACGCAGGGGTGGTGGCGGACGATGGCTGGGTCGGCAGCGCTGTGC TCAACGACCCGGCCCGCGCGCTCGGCTACAGGCTAGCAATGGTCTTTGAATTCCCTCTCCCGCTCCCCCCGGCCT TGCGGCGGTTCGACGTTGGCAGGACGAGCAGCCTCGACCTGGTCCGCACGGACGGCCCTTGGCAGGTGGCGAGGC TGGGGCCCGAAGGCCTCGATCTGCGCATCTCGTCCTGCCTCGTCAACTACGACGCCCGGCTGGGCGAGGTGTACA TGCACAGCGCGTGGGAGGGCCAGGAGCCCGGCGTGTCGTGGGAGGAGAAGACGGACCGTTGGGACTCGGAGGCGA GCCGGCGCCAGCTGGGCGCGTCGACGACGCCCGAGAGTCTCGCTCACCGCGGCTTGCTCGCCCTGGAGCCTCAGC GGCCGGCCCCGTCCCTCGACGCGCTCTGGACGCTAAACATATACGCCTCCTTCGCCGGCGTCGTCGGCCGCGAGC CCTTCTCCGTCTCCGGCTGGGCCCTGACGACGCGCGGGACGTCGTTCCTGGACAGCGTCCGCGCGGCCGTCTTCC ACGACACGCTGGCCTCGACCGGCAGCCCGGCCCTGGCGGTGCAGGCGCTCGTGACGAGGATAAACCAGGTCGCCT ACTACGGCCGGAGCTACGCGGCCGACACGGCCGCCACCGCCGTCTTCGCCGCCACTGCCTCGGTGCCGGCGCGCT GGACCGGCTTCGTCGCCGCCGCCGCCCTCGTCGCCATCCACCTGCTCCTCGTCGCCGCCGCCGCCGCGCTCTTCC TCTGTCTCACCCGCCGCTCCCGCGTCGGCGACGCGTGGCAGGCCGTCGCGCAGGTCGTCTCGCCCGACACGCTGC CGCTGCTCGAGCGCGCCGGCTCCGTCAAGGGGGGCGGGGGTCAGCTCCGGCGTCGGGCCGGCGCCATGCGTCGCG CCCGCCTCCGGCGCCGGCCCGACGGACGCGTCGCCCTCGACGTGCGGGAGTCGGACGAAGGACGAAGACGCGACG CCGAGGCACGCGCGGAACGATAG |