Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3256
Gene name
LocationContig_1836:76..744
Strand+
Gene length (bp)668
Transcript length (bp)612
Coding sequence length (bp)612
Protein length (aa) 204

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08611 DUF1774 Fungal protein of unknown function (DUF1774) 1.6E-38 107 201

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 46 65 19
3 72 94 22
4 104 126 22
5 131 148 17
6 158 180 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3256
LQFGYITHLFSGKAENVYAAASVGSHFILNNLLHFAFVMLFVRSHFHWAELVLVLNFVNLSSLYFRHHTYARFIH
APAVSGPLAWTFVAIYWNGALMVPHQHNLVARVFGNIFIWSILAYGSFFIVAYKDYTMGFALTVLSAAIGVAQFQ
RQVVALQWIFAFVIMALLFVMTVVIAVPAWAGRDLRWRRTAQTDSERAPLLTE*
Coding >Hirsu2|3256
CTGCAGTTCGGCTACATCACCCACCTCTTCTCCGGCAAGGCGGAAAACGTCTACGCCGCCGCCAGCGTCGGCAGC
CACTTCATCCTCAACAACCTGCTGCACTTCGCCTTCGTCATGCTCTTCGTCCGCTCCCACTTCCACTGGGCCGAG
CTCGTCCTCGTCCTCAACTTCGTCAACCTCTCCTCCCTCTACTTCCGCCACCACACCTACGCCCGCTTCATCCAC
GCCCCGGCCGTCTCCGGCCCGCTCGCCTGGACCTTTGTCGCCATCTACTGGAACGGCGCGCTGATGGTGCCGCAC
CAGCACAACCTCGTCGCCCGCGTCTTTGGCAACATCTTCATCTGGTCCATCCTCGCCTACGGCTCCTTCTTCATC
GTCGCCTACAAGGACTACACCATGGGCTTCGCCCTCACCGTCCTCTCCGCCGCCATCGGCGTCGCCCAGTTCCAG
CGCCAGGTCGTCGCCCTGCAGTGGATCTTCGCCTTCGTCATCATGGCCCTGCTCTTCGTCATGACCGTCGTCATC
GCCGTCCCGGCCTGGGCCGGCCGAGACCTCAGGTGGAGGCGCACCGCCCAGACCGACTCTGAACGCGCGCCCCTG
CTCACCGAGTAA
Transcript >Hirsu2|3256
CTGCAGTTCGGCTACATCACCCACCTCTTCTCCGGCAAGGCGGAAAACGTCTACGCCGCCGCCAGCGTCGGCAGC
CACTTCATCCTCAACAACCTGCTGCACTTCGCCTTCGTCATGCTCTTCGTCCGCTCCCACTTCCACTGGGCCGAG
CTCGTCCTCGTCCTCAACTTCGTCAACCTCTCCTCCCTCTACTTCCGCCACCACACCTACGCCCGCTTCATCCAC
GCCCCGGCCGTCTCCGGCCCGCTCGCCTGGACCTTTGTCGCCATCTACTGGAACGGCGCGCTGATGGTGCCGCAC
CAGCACAACCTCGTCGCCCGCGTCTTTGGCAACATCTTCATCTGGTCCATCCTCGCCTACGGCTCCTTCTTCATC
GTCGCCTACAAGGACTACACCATGGGCTTCGCCCTCACCGTCCTCTCCGCCGCCATCGGCGTCGCCCAGTTCCAG
CGCCAGGTCGTCGCCCTGCAGTGGATCTTCGCCTTCGTCATCATGGCCCTGCTCTTCGTCATGACCGTCGTCATC
GCCGTCCCGGCCTGGGCCGGCCGAGACCTCAGGTGGAGGCGCACCGCCCAGACCGACTCTGAACGCGCGCCCCTG
CTCACCGAGTAA
Gene >Hirsu2|3256
CTGCAGTTCGGCTACATCACCCACCTCTTCTCCGGCAAGGCGGAAAACGTCTACGCCGCCGCCAGCGTCGGCAGC
CACTTCATCCTCAACAACCTGCTGCACTTCGCCTTCGTCATGCTCTTCGTCCGCTCCCACTTCCACTGGGCCGAG
CTCGTCCTCGTCCTCAACTTCGTCAACCTCTCCTCCCTCTACTTCCGCCACCACACCTACGCCCGCTTCATCCAC
GCCCCGGCCGTCTCCGGCCCGCTCGCCTGGACCTTTGTCGCCATCTACTGGAACGGCGCGCTGATGGTGCCGCAC
CAGCACAACCTCGTCGCCCGCGTCTTTGGCAACATCTTCATCTGGTCCATCCTCGCCTACGGCTCCTTCTTCATC
GTCGCCTACAAGGTCAGTCCCCCCCCCCCTCTTCTTGCCCTCGCCGACCCGGCTGACGGCCGCGACAGGACTACA
CCATGGGCTTCGCCCTCACCGTCCTCTCCGCCGCCATCGGCGTCGCCCAGTTCCAGCGCCAGGTCGTCGCCCTGC
AGTGGATCTTCGCCTTCGTCATCATGGCCCTGCTCTTCGTCATGACCGTCGTCATCGCCGTCCCGGCCTGGGCCG
GCCGAGACCTCAGGTGGAGGCGCACCGCCCAGACCGACTCTGAACGCGCGCCCCTGCTCACCGAGTAA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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