Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|3256
Gene name
Location	Contig_1836:76..744
Strand	+
Gene length (bp)	668
Transcript length (bp)	612
Coding sequence length (bp)	612
Protein length (aa)	204

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08611	DUF1774	Fungal protein of unknown function (DUF1774)	6.7E-38	107	201

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 20	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	20	42	22
2	46	65	19
3	72	94	22
4	104	126	22
5	131	148	17
6	158	180	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|3256 LQFGYITHLFSGKAENVYAAASVGSHFILNNLLHFAFVMLFVRSHFHWAELVLVLNFVNLSSLYFRHHTYARFIH APAVSGPLAWTFVAIYWNGALMVPHQHNLVARVFGNIFIWSILAYGSFFIVAYKDYTMGFALTVLSAAIGVAQFQ RQVVALQWIFAFVIMALLFVMTVVIAVPAWAGRDLRWRRTAQTDSERAPLLTE*
Coding	>Hirsu2\|3256 CTGCAGTTCGGCTACATCACCCACCTCTTCTCCGGCAAGGCGGAAAACGTCTACGCCGCCGCCAGCGTCGGCAGC CACTTCATCCTCAACAACCTGCTGCACTTCGCCTTCGTCATGCTCTTCGTCCGCTCCCACTTCCACTGGGCCGAG CTCGTCCTCGTCCTCAACTTCGTCAACCTCTCCTCCCTCTACTTCCGCCACCACACCTACGCCCGCTTCATCCAC GCCCCGGCCGTCTCCGGCCCGCTCGCCTGGACCTTTGTCGCCATCTACTGGAACGGCGCGCTGATGGTGCCGCAC CAGCACAACCTCGTCGCCCGCGTCTTTGGCAACATCTTCATCTGGTCCATCCTCGCCTACGGCTCCTTCTTCATC GTCGCCTACAAGGACTACACCATGGGCTTCGCCCTCACCGTCCTCTCCGCCGCCATCGGCGTCGCCCAGTTCCAG CGCCAGGTCGTCGCCCTGCAGTGGATCTTCGCCTTCGTCATCATGGCCCTGCTCTTCGTCATGACCGTCGTCATC GCCGTCCCGGCCTGGGCCGGCCGAGACCTCAGGTGGAGGCGCACCGCCCAGACCGACTCTGAACGCGCGCCCCTG CTCACCGAGTAA
Transcript	>Hirsu2\|3256 CTGCAGTTCGGCTACATCACCCACCTCTTCTCCGGCAAGGCGGAAAACGTCTACGCCGCCGCCAGCGTCGGCAGC CACTTCATCCTCAACAACCTGCTGCACTTCGCCTTCGTCATGCTCTTCGTCCGCTCCCACTTCCACTGGGCCGAG CTCGTCCTCGTCCTCAACTTCGTCAACCTCTCCTCCCTCTACTTCCGCCACCACACCTACGCCCGCTTCATCCAC GCCCCGGCCGTCTCCGGCCCGCTCGCCTGGACCTTTGTCGCCATCTACTGGAACGGCGCGCTGATGGTGCCGCAC CAGCACAACCTCGTCGCCCGCGTCTTTGGCAACATCTTCATCTGGTCCATCCTCGCCTACGGCTCCTTCTTCATC GTCGCCTACAAGGACTACACCATGGGCTTCGCCCTCACCGTCCTCTCCGCCGCCATCGGCGTCGCCCAGTTCCAG CGCCAGGTCGTCGCCCTGCAGTGGATCTTCGCCTTCGTCATCATGGCCCTGCTCTTCGTCATGACCGTCGTCATC GCCGTCCCGGCCTGGGCCGGCCGAGACCTCAGGTGGAGGCGCACCGCCCAGACCGACTCTGAACGCGCGCCCCTG CTCACCGAGTAA
Gene	>Hirsu2\|3256 CTGCAGTTCGGCTACATCACCCACCTCTTCTCCGGCAAGGCGGAAAACGTCTACGCCGCCGCCAGCGTCGGCAGC CACTTCATCCTCAACAACCTGCTGCACTTCGCCTTCGTCATGCTCTTCGTCCGCTCCCACTTCCACTGGGCCGAG CTCGTCCTCGTCCTCAACTTCGTCAACCTCTCCTCCCTCTACTTCCGCCACCACACCTACGCCCGCTTCATCCAC GCCCCGGCCGTCTCCGGCCCGCTCGCCTGGACCTTTGTCGCCATCTACTGGAACGGCGCGCTGATGGTGCCGCAC CAGCACAACCTCGTCGCCCGCGTCTTTGGCAACATCTTCATCTGGTCCATCCTCGCCTACGGCTCCTTCTTCATC GTCGCCTACAAGGTCAGTCCCCCCCCCCCTCTTCTTGCCCTCGCCGACCCGGCTGACGGCCGCGACAGGACTACA CCATGGGCTTCGCCCTCACCGTCCTCTCCGCCGCCATCGGCGTCGCCCAGTTCCAGCGCCAGGTCGTCGCCCTGC AGTGGATCTTCGCCTTCGTCATCATGGCCCTGCTCTTCGTCATGACCGTCGTCATCGCCGTCCCGGCCTGGGCCG GCCGAGACCTCAGGTGGAGGCGCACCGCCCAGACCGACTCTGAACGCGCGCCCCTGCTCACCGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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