Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3246
Gene name
LocationContig_1831:1051..1762
Strand+
Gene length (bp)711
Transcript length (bp)606
Coding sequence length (bp)606
Protein length (aa) 202

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide 0.136 0.1361 0.448 0.0793 0.207 0.0262 0.5399 0.4175 0.3372 0.0411

SignalP

SignalP signal predicted Location Score
Yes 1 - 18 0.99962

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 131 153 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6092
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|00848
Ophiocordyceps camponoti-rufipedis Ophun1|5107
Ophiocordyceps kimflemingae Ophio5|610
Ophiocordyceps subramaniannii Hirsu2|3246 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3246
MRLLSVLLGAGLAGAGLAAPVAVPYQVITTEDGAPLIRTRVARIDDASPVVPAHLSGRISSYVSAVLEPLRQTEF
NMEMIPVFAIDKESVEVMTDSNGDLVALSYTQRLRALVWNPSTRAFYLYPMPGLRGRLPVAILAVSFWVLFTCLY
FSGPSQGTQDPALEEQGLIRGPYPREKEESVGETSQPLSSTHSRDEGSHLL*
Coding >Hirsu2|3246
ATGAGGCTGCTCTCCGTCCTGCTCGGCGCCGGGCTTGCCGGAGCCGGCCTCGCGGCCCCGGTCGCCGTGCCCTAC
CAGGTCATCACGACCGAAGACGGCGCGCCGCTGATCAGAACGCGCGTCGCCCGCATCGACGATGCGTCGCCCGTC
GTGCCCGCGCACCTCTCGGGCCGGATATCCAGCTACGTCTCGGCCGTGCTCGAGCCGCTGCGCCAGACCGAGTTC
AACATGGAGATGATTCCCGTCTTCGCCATCGACAAGGAGAGCGTCGAGGTCATGACCGACTCCAACGGCGACCTC
GTCGCCCTCAGCTACACCCAGCGGCTCCGGGCCCTCGTCTGGAACCCGTCCACCCGGGCCTTCTATCTCTACCCC
ATGCCGGGCCTCCGCGGACGCCTGCCCGTCGCCATCCTGGCCGTCTCCTTTTGGGTTCTGTTTACCTGCCTCTAC
TTTTCAGGGCCCTCGCAAGGCACCCAGGACCCGGCTCTGGAAGAGCAAGGTCTCATCCGCGGCCCGTATCCAAGG
GAGAAGGAGGAGAGCGTGGGCGAAACGTCGCAGCCGCTGTCGTCGACACATTCAAGAGACGAGGGCTCCCATTTG
TTATAG
Transcript >Hirsu2|3246
ATGAGGCTGCTCTCCGTCCTGCTCGGCGCCGGGCTTGCCGGAGCCGGCCTCGCGGCCCCGGTCGCCGTGCCCTAC
CAGGTCATCACGACCGAAGACGGCGCGCCGCTGATCAGAACGCGCGTCGCCCGCATCGACGATGCGTCGCCCGTC
GTGCCCGCGCACCTCTCGGGCCGGATATCCAGCTACGTCTCGGCCGTGCTCGAGCCGCTGCGCCAGACCGAGTTC
AACATGGAGATGATTCCCGTCTTCGCCATCGACAAGGAGAGCGTCGAGGTCATGACCGACTCCAACGGCGACCTC
GTCGCCCTCAGCTACACCCAGCGGCTCCGGGCCCTCGTCTGGAACCCGTCCACCCGGGCCTTCTATCTCTACCCC
ATGCCGGGCCTCCGCGGACGCCTGCCCGTCGCCATCCTGGCCGTCTCCTTTTGGGTTCTGTTTACCTGCCTCTAC
TTTTCAGGGCCCTCGCAAGGCACCCAGGACCCGGCTCTGGAAGAGCAAGGTCTCATCCGCGGCCCGTATCCAAGG
GAGAAGGAGGAGAGCGTGGGCGAAACGTCGCAGCCGCTGTCGTCGACACATTCAAGAGACGAGGGCTCCCATTTG
TTATAG
Gene >Hirsu2|3246
ATGAGGCTGCTCTCCGTCCTGCTCGGCGCCGGGCTTGCCGGAGCCGGCCTCGCGGCCCCGGTCGCCGTGCCCTAC
CAGGTCATCACGACCGAAGACGGCGCGCCGCTGATCAGAACGCGCGTCGCCCGCATCGACGATGCGTCGCCCGTC
GTGCCCGCGCACCTCTCGGGCCGGATATCCAGCTACGTCTCGGCCGTGCTCGAGCCGCTGCGCCAGACCGAGTTC
AACATGGAGATGATTCCCGTCTTCGCCATCGACAAGGAGAGCGTCGAGGTCATGACCGACTCCAACGGCGACCTC
GTCGCCCTCAGCTACACCCAGCGGCTCCGGGCCCTCGTCTGGAACCCGTCCACCCGGGCCTTCTATCTCTACCCC
ATGCCGGGCCTCCGCGGACGCCTGCCCGTCGCCATCCTGGCCGTCTCCTTTTGGGTTCTGTTTACCTGCCTCTAC
TTTTCAGGGTAAGGGTCCGCCGTCTCGCCGCCGCTTGGCCGCGCCGTCGTTGCTCGCTTCACGTATTCCTAGCCC
TTGACTCCGAATGTTGACTGACTCTTGCTCTCCGCCAGGCCCTCGCAAGGCACCCAGGACCCGGCTCTGGAAGAG
CAAGGTCTCATCCGCGGCCCGTATCCAAGGGAGAAGGAGGAGAGCGTGGGCGAAACGTCGCAGCCGCTGTCGTCG
ACACATTCAAGAGACGAGGGCTCCCATTTGTTATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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