© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3241 |
| Gene name | |
| Location | Contig_183:25449..27433 |
| Strand | + |
| Gene length (bp) | 1984 |
| Transcript length (bp) | 1902 |
| Coding sequence length (bp) | 1902 |
| Protein length (aa) | 634 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | 0.113 | 0.1172 | 0.8666 | 0.4315 | 0.023 | 0.0024 | 0.3108 | 0.2839 | 0.204 | 0.0018 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 16 | 0.999725 |
| Orthofinder run ID | 4 |
| Orthogroup | 2353 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3241 MVYRFALLALAASALGDRLQPRHGYPEHGEEPAPTKTTELVTYTTTTVCPVTSTVTSKGTTYWQTHLTTSTLTVT ECKGCGAGVVTVPGPVVTGVTTKLVEVTYTSLCPVTETVTGPGHTYLTTHTVTSNIVTQVPTTIYESVPGPEETK TAVDVVYTTLTSLCPVTKVTTIAGQERTVTYTTTSLIKTTLPTTIAETVTQPDHVATETDVEYKTITSLCPVTKT TTVGGKEYTTTYTTTSLIKTTVPKTVQETVQKPDHVATETDVEYKTITKVYPVTQTTTIGGKEYTTTYTTTKLVE TKVPKTVQETVKESDSTVTATDVEYATVTKVYPVTQVTTIAGEVHTKTYTTTKLVKTAIHQTVQETVKQPDTEAT QTEVQYATVTKVYPVTQVTTISGEVHTKTYTTTKLVKTAIYQTVDQTVKQPDTTATATDVEYKTITKVFPVTKVT TIGGQEQTITYKTTKVIETQVPVTVQQTVKQPDTTETATDVEYKTVTNVHAVTKVVTVGGEKQTVKYTTTKVVKI HEANTVYTTVTKPGATETETEVEYVTKKVGSPVTETVVVPGAGHTEVVYSTHTVKGEQSTVYVSQSLAPVYTSPP SSLASAVPTAAAQANGVPVVALVVGVAGIMAVL* |
| Coding | >Hirsu2|3241 ATGGTGTACCGCTTCGCCCTTCTGGCCCTGGCCGCCTCGGCCCTGGGAGACCGGCTCCAGCCGAGACACGGGTAC CCGGAACATGGAGAGGAGCCCGCGCCGACCAAGACGACGGAGCTGGTGACTTACACCACCACGACCGTCTGCCCC GTCACCTCGACAGTCACCTCCAAGGGAACAACCTACTGGCAGACGCATCTCACGACGTCGACGCTGACCGTTACT GAGTGCAAGGGCTGCGGCGCTGGAGTGGTCACGGTCCCCGGCCCCGTCGTCACCGGCGTCACCACCAAGCTGGTC GAGGTCACCTACACGTCGCTGTGCCCCGTGACCGAGACCGTCACCGGCCCCGGACACACGTACCTGACGACCCAC ACCGTCACCAGCAACATCGTCACCCAGGTCCCGACCACCATCTACGAGAGCGTCCCCGGCCCCGAGGAGACCAAG ACGGCCGTCGACGTCGTCTACACGACCCTGACGAGCCTGTGCCCCGTGACCAAGGTGACGACCATTGCCGGACAG GAACGGACCGTCACCTACACCACCACCAGTCTCATCAAGACGACGCTGCCCACCACCATCGCCGAGACCGTGACG CAGCCCGACCACGTCGCCACCGAGACCGACGTCGAGTACAAGACCATCACCAGCCTGTGCCCCGTCACCAAGACC ACCACCGTTGGCGGCAAGGAGTATACCACCACGTATACCACCACGAGCCTCATCAAGACGACGGTGCCCAAGACG GTTCAGGAGACGGTTCAGAAGCCCGACCACGTCGCCACCGAGACCGATGTTGAGTACAAGACCATCACCAAGGTC TACCCCGTGACGCAGACGACCACCATCGGCGGCAAGGAGTACACCACCACCTACACCACCACCAAGCTGGTCGAG ACCAAGGTTCCCAAGACGGTTCAGGAGACTGTCAAGGAATCCGACAGCACCGTCACGGCCACGGACGTCGAGTAT GCCACCGTCACCAAGGTCTACCCCGTCACCCAGGTCACCACCATTGCTGGTGAGGTCCACACCAAGACGTACACG ACGACCAAGCTGGTCAAGACGGCCATCCACCAGACCGTCCAAGAGACCGTGAAGCAGCCCGACACGGAGGCGACG CAGACGGAGGTCCAGTATGCCACCGTCACCAAGGTTTACCCCGTCACCCAGGTCACGACCATTTCCGGTGAGGTC CACACCAAGACGTACACGACCACCAAGCTGGTCAAGACGGCCATCTACCAGACCGTCGACCAGACTGTCAAGCAG CCCGATACCACGGCCACTGCCACGGACGTCGAGTACAAGACGATCACCAAGGTCTTCCCCGTCACCAAGGTGACG ACCATCGGCGGGCAGGAGCAGACCATCACGTACAAGACGACCAAGGTGATCGAGACGCAGGTGCCCGTCACGGTC CAGCAGACGGTCAAGCAGCCCGATACGACGGAGACGGCCACGGACGTCGAGTACAAGACGGTCACCAACGTGCAC GCCGTGACCAAGGTGGTGACGGTCGGCGGCGAGAAGCAGACGGTCAAGTACACGACGACCAAGGTGGTCAAGATC CACGAGGCCAACACCGTCTACACCACCGTCACCAAGCCCGGCGCGACCGAGACCGAGACCGAGGTCGAATACGTG ACCAAGAAGGTGGGCAGCCCCGTCACGGAGACGGTCGTCGTCCCCGGCGCCGGCCATACCGAGGTCGTCTATTCC ACTCACACCGTCAAGGGCGAACAATCGACCGTCTACGTCTCGCAGTCGCTGGCGCCCGTCTACACGTCGCCGCCC AGCTCTCTGGCGTCGGCCGTGCCCACCGCCGCGGCTCAGGCCAACGGCGTGCCCGTCGTCGCCCTCGTCGTCGGT GTCGCCGGCATCATGGCCGTCCTCTAA |
| Transcript | >Hirsu2|3241 ATGGTGTACCGCTTCGCCCTTCTGGCCCTGGCCGCCTCGGCCCTGGGAGACCGGCTCCAGCCGAGACACGGGTAC CCGGAACATGGAGAGGAGCCCGCGCCGACCAAGACGACGGAGCTGGTGACTTACACCACCACGACCGTCTGCCCC GTCACCTCGACAGTCACCTCCAAGGGAACAACCTACTGGCAGACGCATCTCACGACGTCGACGCTGACCGTTACT GAGTGCAAGGGCTGCGGCGCTGGAGTGGTCACGGTCCCCGGCCCCGTCGTCACCGGCGTCACCACCAAGCTGGTC GAGGTCACCTACACGTCGCTGTGCCCCGTGACCGAGACCGTCACCGGCCCCGGACACACGTACCTGACGACCCAC ACCGTCACCAGCAACATCGTCACCCAGGTCCCGACCACCATCTACGAGAGCGTCCCCGGCCCCGAGGAGACCAAG ACGGCCGTCGACGTCGTCTACACGACCCTGACGAGCCTGTGCCCCGTGACCAAGGTGACGACCATTGCCGGACAG GAACGGACCGTCACCTACACCACCACCAGTCTCATCAAGACGACGCTGCCCACCACCATCGCCGAGACCGTGACG CAGCCCGACCACGTCGCCACCGAGACCGACGTCGAGTACAAGACCATCACCAGCCTGTGCCCCGTCACCAAGACC ACCACCGTTGGCGGCAAGGAGTATACCACCACGTATACCACCACGAGCCTCATCAAGACGACGGTGCCCAAGACG GTTCAGGAGACGGTTCAGAAGCCCGACCACGTCGCCACCGAGACCGATGTTGAGTACAAGACCATCACCAAGGTC TACCCCGTGACGCAGACGACCACCATCGGCGGCAAGGAGTACACCACCACCTACACCACCACCAAGCTGGTCGAG ACCAAGGTTCCCAAGACGGTTCAGGAGACTGTCAAGGAATCCGACAGCACCGTCACGGCCACGGACGTCGAGTAT GCCACCGTCACCAAGGTCTACCCCGTCACCCAGGTCACCACCATTGCTGGTGAGGTCCACACCAAGACGTACACG ACGACCAAGCTGGTCAAGACGGCCATCCACCAGACCGTCCAAGAGACCGTGAAGCAGCCCGACACGGAGGCGACG CAGACGGAGGTCCAGTATGCCACCGTCACCAAGGTTTACCCCGTCACCCAGGTCACGACCATTTCCGGTGAGGTC CACACCAAGACGTACACGACCACCAAGCTGGTCAAGACGGCCATCTACCAGACCGTCGACCAGACTGTCAAGCAG CCCGATACCACGGCCACTGCCACGGACGTCGAGTACAAGACGATCACCAAGGTCTTCCCCGTCACCAAGGTGACG ACCATCGGCGGGCAGGAGCAGACCATCACGTACAAGACGACCAAGGTGATCGAGACGCAGGTGCCCGTCACGGTC CAGCAGACGGTCAAGCAGCCCGATACGACGGAGACGGCCACGGACGTCGAGTACAAGACGGTCACCAACGTGCAC GCCGTGACCAAGGTGGTGACGGTCGGCGGCGAGAAGCAGACGGTCAAGTACACGACGACCAAGGTGGTCAAGATC CACGAGGCCAACACCGTCTACACCACCGTCACCAAGCCCGGCGCGACCGAGACCGAGACCGAGGTCGAATACGTG ACCAAGAAGGTGGGCAGCCCCGTCACGGAGACGGTCGTCGTCCCCGGCGCCGGCCATACCGAGGTCGTCTATTCC ACTCACACCGTCAAGGGCGAACAATCGACCGTCTACGTCTCGCAGTCGCTGGCGCCCGTCTACACGTCGCCGCCC AGCTCTCTGGCGTCGGCCGTGCCCACCGCCGCGGCTCAGGCCAACGGCGTGCCCGTCGTCGCCCTCGTCGTCGGT GTCGCCGGCATCATGGCCGTCCTCTAA |
| Gene | >Hirsu2|3241 ATGGTGTACCGCTTCGCCCTTCTGGCCCTGGCCGCCTCGGCCCTGGGAGACCGGCTCCAGCCGAGACACGGGTAC CCGGAACATGGAGAGGAGCCCGCGCCGACCAAGACGACGGAGCTGGTGACTTACACCACCACGACCGTCTGCCCC GTCACCTCGACAGTCACCTCCAAGGGAACGTGAGTGGCAGGCCCCTACCCCGGCGTTTGGGGTAGCCAATCTGTG AGCTGGGGGGCAAGCTGACTGAAGACGGAATATCAGAACCTACTGGCAGACGCATCTCACGACGTCGACGCTGAC CGTTACTGAGTGCAAGGGCTGCGGCGCTGGAGTGGTCACGGTCCCCGGCCCCGTCGTCACCGGCGTCACCACCAA GCTGGTCGAGGTCACCTACACGTCGCTGTGCCCCGTGACCGAGACCGTCACCGGCCCCGGACACACGTACCTGAC GACCCACACCGTCACCAGCAACATCGTCACCCAGGTCCCGACCACCATCTACGAGAGCGTCCCCGGCCCCGAGGA GACCAAGACGGCCGTCGACGTCGTCTACACGACCCTGACGAGCCTGTGCCCCGTGACCAAGGTGACGACCATTGC CGGACAGGAACGGACCGTCACCTACACCACCACCAGTCTCATCAAGACGACGCTGCCCACCACCATCGCCGAGAC CGTGACGCAGCCCGACCACGTCGCCACCGAGACCGACGTCGAGTACAAGACCATCACCAGCCTGTGCCCCGTCAC CAAGACCACCACCGTTGGCGGCAAGGAGTATACCACCACGTATACCACCACGAGCCTCATCAAGACGACGGTGCC CAAGACGGTTCAGGAGACGGTTCAGAAGCCCGACCACGTCGCCACCGAGACCGATGTTGAGTACAAGACCATCAC CAAGGTCTACCCCGTGACGCAGACGACCACCATCGGCGGCAAGGAGTACACCACCACCTACACCACCACCAAGCT GGTCGAGACCAAGGTTCCCAAGACGGTTCAGGAGACTGTCAAGGAATCCGACAGCACCGTCACGGCCACGGACGT CGAGTATGCCACCGTCACCAAGGTCTACCCCGTCACCCAGGTCACCACCATTGCTGGTGAGGTCCACACCAAGAC GTACACGACGACCAAGCTGGTCAAGACGGCCATCCACCAGACCGTCCAAGAGACCGTGAAGCAGCCCGACACGGA GGCGACGCAGACGGAGGTCCAGTATGCCACCGTCACCAAGGTTTACCCCGTCACCCAGGTCACGACCATTTCCGG TGAGGTCCACACCAAGACGTACACGACCACCAAGCTGGTCAAGACGGCCATCTACCAGACCGTCGACCAGACTGT CAAGCAGCCCGATACCACGGCCACTGCCACGGACGTCGAGTACAAGACGATCACCAAGGTCTTCCCCGTCACCAA GGTGACGACCATCGGCGGGCAGGAGCAGACCATCACGTACAAGACGACCAAGGTGATCGAGACGCAGGTGCCCGT CACGGTCCAGCAGACGGTCAAGCAGCCCGATACGACGGAGACGGCCACGGACGTCGAGTACAAGACGGTCACCAA CGTGCACGCCGTGACCAAGGTGGTGACGGTCGGCGGCGAGAAGCAGACGGTCAAGTACACGACGACCAAGGTGGT CAAGATCCACGAGGCCAACACCGTCTACACCACCGTCACCAAGCCCGGCGCGACCGAGACCGAGACCGAGGTCGA ATACGTGACCAAGAAGGTGGGCAGCCCCGTCACGGAGACGGTCGTCGTCCCCGGCGCCGGCCATACCGAGGTCGT CTATTCCACTCACACCGTCAAGGGCGAACAATCGACCGTCTACGTCTCGCAGTCGCTGGCGCCCGTCTACACGTC GCCGCCCAGCTCTCTGGCGTCGGCCGTGCCCACCGCCGCGGCTCAGGCCAACGGCGTGCCCGTCGTCGCCCTCGT CGTCGGTGTCGCCGGCATCATGGCCGTCCTCTAA |