© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3240 |
| Gene name | |
| Location | Contig_183:16340..18250 |
| Strand | + |
| Gene length (bp) | 1910 |
| Transcript length (bp) | 1785 |
| Coding sequence length (bp) | 1785 |
| Protein length (aa) | 595 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.5E-12 | 28 | 142 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 5.0E-13 | 204 | 482 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 21 | 43 | 22 |
| 2 | 58 | 80 | 22 |
| 3 | 85 | 107 | 22 |
| 4 | 117 | 139 | 22 |
| 5 | 205 | 227 | 22 |
| 6 | 242 | 264 | 22 |
| 7 | 341 | 363 | 22 |
| 8 | 395 | 417 | 22 |
| 9 | 424 | 446 | 22 |
| 10 | 461 | 483 | 22 |
| 11 | 536 | 558 | 22 |
| 12 | 568 | 585 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3240 MPSISRFLPFAASTTTVQAATYLLGVSLFSISFLVFLNSSVSFVITDLIGQKHNVGDVVGTLGFADELVALVACP TWGLISDRLGVRWVATIGYAIIGLALAVFVQAKNVYPQLLLARMFFAVGASAAATMVTAILPSLTDEADDDATAV SGSSRNKPNPRLSAAFSVESEVTITPERYSRSLSRERAHSPGQDAAAKSGKASALAGFVGAFTGCGALVALAVFL PLPARFGGVDGVTPGEAVSYSFYVVGVVSLAVSLFVFFGLRNLKGEDGKGWRVLFGRQSRYHEVDNAEADDDGDD GDDDDDDDNGEHRPRDKVVVPYLHLVRDSMRLGFTDPRIALGYLGGFVARASTVAVSLFIPLFVNTYFISNGFCR GSPHDPSPELKKECRAAYVLSSVLTGVAQLVGLLCAPLFGYLSGRTGRVNYPVMAASALGMIGYIVLPHLSSPEI KNVEGRGGSPVILVVVALIGISQIGAIVCSLGSLGQGVLAVELPRPARREPSIAPDDDESTESDPLVAASSTAGE APSRVRLKGSIAGMYSLCGGAAILILTKVGGLLFDKLSHGAPFYMMAVFNGAWLVASLLMDASQVFSGA* |
| Coding | >Hirsu2|3240 ATGCCGTCGATTTCGCGCTTCCTGCCGTTCGCGGCGTCGACAACGACGGTCCAGGCGGCGACGTATCTGCTCGGC GTCTCGCTCTTCTCCATTTCCTTCCTCGTCTTCCTCAACAGCTCCGTCTCCTTTGTCATCACCGACCTGATCGGC CAGAAGCACAACGTGGGCGACGTGGTCGGCACGCTGGGCTTCGCGGATGAGCTCGTCGCCCTGGTGGCTTGTCCC ACGTGGGGGCTCATCTCGGACCGGCTCGGGGTTCGATGGGTGGCCACGATCGGCTACGCCATCATCGGCCTCGCC CTGGCCGTCTTCGTCCAGGCCAAGAACGTCTACCCCCAGCTACTGCTGGCGCGCATGTTCTTCGCCGTCGGGGCC TCGGCAGCCGCCACCATGGTCACGGCCATACTCCCCTCCCTGACGGACGAGGCCGACGACGACGCCACAGCCGTG TCCGGATCGTCGAGGAACAAGCCAAACCCGCGACTCAGCGCGGCCTTTTCCGTCGAGTCCGAAGTCACCATCACC CCGGAGAGGTATAGCCGAAGCCTGTCGCGCGAACGCGCACACAGCCCCGGCCAGGACGCCGCGGCCAAGTCGGGA AAAGCCTCGGCCCTGGCCGGCTTTGTAGGCGCCTTCACGGGCTGCGGCGCTCTCGTGGCGCTGGCCGTCTTCTTG CCGCTACCGGCGAGGTTCGGCGGTGTCGACGGTGTGACTCCCGGGGAGGCTGTGTCGTACAGCTTCTACGTCGTC GGAGTCGTCTCTCTGGCCGTCTCTCTCTTCGTCTTCTTCGGCCTGCGCAATCTGAAGGGCGAAGACGGCAAGGGC TGGAGAGTGCTTTTCGGCCGACAAAGTCGCTACCACGAGGTGGACAATGCCGAAGCGGACGACGACGGCGACGAC GGCGACGACGACGACGACGACGACAACGGCGAGCACCGGCCGCGAGACAAGGTTGTGGTCCCGTACCTCCATCTC GTGCGAGACTCGATGCGGCTGGGGTTTACCGACCCGCGGATCGCGCTGGGCTACCTCGGCGGCTTTGTCGCCAGG GCCTCTACGGTGGCCGTCTCTCTTTTCATTCCCTTGTTTGTCAACACGTACTTCATCAGCAACGGCTTCTGCCGG GGCTCACCCCACGACCCGTCGCCGGAGCTCAAGAAGGAATGCCGAGCGGCCTATGTCCTGTCGTCGGTCCTGACG GGCGTCGCGCAGCTCGTGGGCCTACTGTGCGCCCCGCTCTTTGGCTACCTCTCGGGTCGCACCGGAAGGGTCAAC TATCCCGTCATGGCGGCGAGTGCCCTGGGCATGATTGGCTATATCGTCCTGCCGCACCTCTCGAGCCCCGAGATC AAGAACGTGGAGGGGCGCGGGGGCAGCCCGGTCATCCTCGTCGTCGTCGCCCTGATCGGCATCAGCCAGATCGGG GCCATTGTCTGCAGCCTGGGGTCGCTGGGCCAGGGCGTGCTGGCCGTCGAGCTGCCGCGGCCGGCGCGGCGCGAG CCATCGATCGCGCCGGACGACGACGAGTCCACCGAGTCGGACCCTCTGGTGGCGGCGAGCTCGACGGCGGGCGAG GCCCCGTCGCGGGTACGGCTGAAGGGGTCCATCGCCGGAATGTATTCGCTGTGCGGGGGCGCCGCCATCCTGATC TTGACCAAGGTCGGCGGGCTCCTGTTCGACAAGCTGTCGCACGGGGCGCCCTTTTACATGATGGCCGTCTTCAAC GGGGCTTGGCTCGTGGCCAGCCTGCTGATGGACGCGTCGCAGGTCTTCTCGGGGGCGTGA |
| Transcript | >Hirsu2|3240 ATGCCGTCGATTTCGCGCTTCCTGCCGTTCGCGGCGTCGACAACGACGGTCCAGGCGGCGACGTATCTGCTCGGC GTCTCGCTCTTCTCCATTTCCTTCCTCGTCTTCCTCAACAGCTCCGTCTCCTTTGTCATCACCGACCTGATCGGC CAGAAGCACAACGTGGGCGACGTGGTCGGCACGCTGGGCTTCGCGGATGAGCTCGTCGCCCTGGTGGCTTGTCCC ACGTGGGGGCTCATCTCGGACCGGCTCGGGGTTCGATGGGTGGCCACGATCGGCTACGCCATCATCGGCCTCGCC CTGGCCGTCTTCGTCCAGGCCAAGAACGTCTACCCCCAGCTACTGCTGGCGCGCATGTTCTTCGCCGTCGGGGCC TCGGCAGCCGCCACCATGGTCACGGCCATACTCCCCTCCCTGACGGACGAGGCCGACGACGACGCCACAGCCGTG TCCGGATCGTCGAGGAACAAGCCAAACCCGCGACTCAGCGCGGCCTTTTCCGTCGAGTCCGAAGTCACCATCACC CCGGAGAGGTATAGCCGAAGCCTGTCGCGCGAACGCGCACACAGCCCCGGCCAGGACGCCGCGGCCAAGTCGGGA AAAGCCTCGGCCCTGGCCGGCTTTGTAGGCGCCTTCACGGGCTGCGGCGCTCTCGTGGCGCTGGCCGTCTTCTTG CCGCTACCGGCGAGGTTCGGCGGTGTCGACGGTGTGACTCCCGGGGAGGCTGTGTCGTACAGCTTCTACGTCGTC GGAGTCGTCTCTCTGGCCGTCTCTCTCTTCGTCTTCTTCGGCCTGCGCAATCTGAAGGGCGAAGACGGCAAGGGC TGGAGAGTGCTTTTCGGCCGACAAAGTCGCTACCACGAGGTGGACAATGCCGAAGCGGACGACGACGGCGACGAC GGCGACGACGACGACGACGACGACAACGGCGAGCACCGGCCGCGAGACAAGGTTGTGGTCCCGTACCTCCATCTC GTGCGAGACTCGATGCGGCTGGGGTTTACCGACCCGCGGATCGCGCTGGGCTACCTCGGCGGCTTTGTCGCCAGG GCCTCTACGGTGGCCGTCTCTCTTTTCATTCCCTTGTTTGTCAACACGTACTTCATCAGCAACGGCTTCTGCCGG GGCTCACCCCACGACCCGTCGCCGGAGCTCAAGAAGGAATGCCGAGCGGCCTATGTCCTGTCGTCGGTCCTGACG GGCGTCGCGCAGCTCGTGGGCCTACTGTGCGCCCCGCTCTTTGGCTACCTCTCGGGTCGCACCGGAAGGGTCAAC TATCCCGTCATGGCGGCGAGTGCCCTGGGCATGATTGGCTATATCGTCCTGCCGCACCTCTCGAGCCCCGAGATC AAGAACGTGGAGGGGCGCGGGGGCAGCCCGGTCATCCTCGTCGTCGTCGCCCTGATCGGCATCAGCCAGATCGGG GCCATTGTCTGCAGCCTGGGGTCGCTGGGCCAGGGCGTGCTGGCCGTCGAGCTGCCGCGGCCGGCGCGGCGCGAG CCATCGATCGCGCCGGACGACGACGAGTCCACCGAGTCGGACCCTCTGGTGGCGGCGAGCTCGACGGCGGGCGAG GCCCCGTCGCGGGTACGGCTGAAGGGGTCCATCGCCGGAATGTATTCGCTGTGCGGGGGCGCCGCCATCCTGATC TTGACCAAGGTCGGCGGGCTCCTGTTCGACAAGCTGTCGCACGGGGCGCCCTTTTACATGATGGCCGTCTTCAAC GGGGCTTGGCTCGTGGCCAGCCTGCTGATGGACGCGTCGCAGGTCTTCTCGGGGGCGTGA |
| Gene | >Hirsu2|3240 ATGCCGTCGATTTCGCGCTTCCTGCCGTTCGCGGCGTCGACAACGACGGTCCAGGCGGCGACGTATCTGCTCGGC GTCTCGCTCTTCTCCATTTCCTTCCTCGTCTTCCTCAACAGCTCCGTCTCCTTTGTCATCACCGACCTGATCGGC CAGAAGCACAACGTGGGCGACGTGGTCGGCACGCTGGGCTTCGCGGATGAGCTCGTCGCCCTGGTGGCTTGTCCC ACGTGGGGGCTCATCTCGGACCGGCTCGGGGTTCGATGGGTGGCCACGATCGGCTACGCCATCATCGGCCTCGCC CTGGCCGTCTTCGTCCAGGCCAAGAACGTCTACCCCCAGCTACTGCTGGCGCGCATGTTCTTCGCCGTCGGGGCC TCGGCAGCGTGAGTGTGGCGAAATCCATCCGAGGCTGCGTCCGCGAGCTGACAGCTCTCAGCGCCACCATGGTCA CGGCCATACTCCCCTCCCTGACGGACGAGGCCGACGACGACGCCACAGCCGTGTCCGGATCGTCGAGGAACAAGC CAAACCCGCGACTCAGCGCGGCCTTTTCCGTCGAGTCCGAAGTCACCATCACCCCGGAGAGGTATAGCCGAAGCC TGTCGCGCGAACGCGCACACAGCCCCGGCCAGGACGCCGCGGCCAAGTCGGGAAAAGCCTCGGCCCTGGCCGGCT TTGTAGGCGCCTTCACGGGCTGCGGCGCTCTCGTGGCGCTGGCCGTCTTCTTGCCGCTACCGGCGAGGTTCGGCG GTGTCGACGGTGTGACTCCCGGGGAGGCTGTGTCGTACAGCTTCTACGTCGTCGGAGTCGTCTCTCTGGCCGTCT CTCTCTTCGTCTTCTTCGGCCTGCGCAATCTGAAGGGCGAAGACGGCAAGGGCTGGAGAGTGCTTTTCGGCCGAC AAAGTCGCTACCACGAGGTGGACAATGCCGAAGCGGACGACGACGGCGACGACGGCGACGACGACGACGACGACG ACAACGGCGAGCACCGGCCGCGAGACAAGGTAGGCAGGCAGGCTCTCCGGAAATTGGCGACGGTCCGCCCGCCCG ACTTGTTGCTGACCGCCAAGATGCAGGTTGTGGTCCCGTACCTCCATCTCGTGCGAGACTCGATGCGGCTGGGGT TTACCGACCCGCGGATCGCGCTGGGCTACCTCGGCGGCTTTGTCGCCAGGGCCTCTACGGTGGCCGTCTCTCTTT TCATTCCCTTGTTTGTCAACACGTACTTCATCAGCAACGGCTTCTGCCGGGGCTCACCCCACGACCCGTCGCCGG AGCTCAAGAAGGAATGCCGAGCGGCCTATGTCCTGTCGTCGGTCCTGACGGGCGTCGCGCAGCTCGTGGGCCTAC TGTGCGCCCCGCTCTTTGGCTACCTCTCGGGTCGCACCGGAAGGGTCAACTATCCCGTCATGGCGGCGAGTGCCC TGGGCATGATTGGCTATATCGTCCTGCCGCACCTCTCGAGCCCCGAGATCAAGAACGTGGAGGGGCGCGGGGGCA GCCCGGTCATCCTCGTCGTCGTCGCCCTGATCGGCATCAGCCAGATCGGGGCCATTGTCTGCAGCCTGGGGTCGC TGGGCCAGGGCGTGCTGGCCGTCGAGCTGCCGCGGCCGGCGCGGCGCGAGCCATCGATCGCGCCGGACGACGACG AGTCCACCGAGTCGGACCCTCTGGTGGCGGCGAGCTCGACGGCGGGCGAGGCCCCGTCGCGGGTACGGCTGAAGG GGTCCATCGCCGGAATGTATTCGCTGTGCGGGGGCGCCGCCATCCTGATCTTGACCAAGGTCGGCGGGCTCCTGT TCGACAAGCTGTCGCACGGGGCGCCCTTTTACATGATGGCCGTCTTCAACGGGGCTTGGCTCGTGGCCAGCCTGC TGATGGACGCGTCGCAGGTCTTCTCGGGGGCGTGA |