Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3234
Gene name
LocationContig_1829:2563..4112
Strand-
Gene length (bp)1549
Transcript length (bp)1080
Coding sequence length (bp)1080
Protein length (aa) 360

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22
2 48 70 22
3 103 125 22
4 138 160 22
5 186 208 22
6 221 243 22
7 258 280 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3234
MGLAHGYYQQPGHVVAAGVVLPLLAVVAVGLRLWTRLKQGQGVRADDWLVLPAALLTVGQGINLVVGVALGSLAA
PLVIPPGFEANPLAIRTPQVVAMGKAEFFFELTLPLVLGFVKLSFLLFYVRIFVVSRAGAVSLLLHGLVAVVSLW
MLACFLALLFECRLRFWAAWGSALDIVQNCDDTFAFVYAVCLSDFIVDVLIILIPIPLVWRLKVSRRKKLAMIAV
FLLGAVAVAASLTRLIITLQLVYSAFDPSSDEILVVTTYMYWGVVECAVGILAACLPSLSLLARLLSFESAWQSF
VSVFSSGHSRTGSAVDGSRTDAATGEVPSPPARGRKRSDWSDDVFPLTDVSPSGTRETV*
Coding >Hirsu2|3234
ATGGGCCTCGCGCACGGCTACTACCAGCAGCCAGGCCACGTCGTCGCCGCCGGCGTCGTGCTGCCGCTGCTGGCC
GTCGTCGCCGTCGGCCTGCGCCTGTGGACGCGCCTCAAGCAGGGCCAGGGCGTCCGGGCCGACGACTGGCTCGTC
CTCCCGGCCGCGCTCCTGACCGTCGGCCAGGGCATCAACCTGGTCGTCGGCGTCGCGCTCGGCTCGCTGGCCGCG
CCGCTCGTCATCCCGCCCGGCTTCGAGGCGAACCCGCTGGCGATCCGGACGCCGCAGGTCGTCGCCATGGGCAAG
GCCGAGTTCTTCTTCGAGCTGACGCTGCCGCTGGTCCTCGGCTTCGTCAAGCTGAGCTTCCTGCTCTTCTACGTC
CGCATCTTCGTCGTCAGCCGCGCCGGCGCCGTCAGCCTGCTGCTGCACGGCCTCGTCGCCGTCGTCTCGCTCTGG
ATGCTCGCCTGCTTCCTCGCCCTGCTGTTCGAGTGCCGGCTGCGCTTCTGGGCCGCCTGGGGGTCCGCCCTCGAC
ATTGTCCAGAACTGCGACGACACCTTCGCCTTCGTCTACGCCGTCTGCCTGTCCGACTTTATCGTCGACGTCCTC
ATCATCCTCATTCCCATCCCGCTGGTCTGGCGCTTGAAGGTATCGCGGCGCAAGAAGCTGGCCATGATTGCCGTC
TTCCTCCTCGGAGCCGTGGCCGTCGCGGCGTCTTTGACGCGCCTGATCATCACGCTGCAGCTCGTCTACAGCGCC
TTCGACCCCAGCTCCGACGAGATCTTGGTGGTGACGACGTACATGTACTGGGGCGTGGTCGAGTGTGCCGTCGGC
ATCCTGGCCGCCTGCCTGCCCTCGCTCTCGCTGCTCGCCCGCCTCCTGTCCTTCGAGTCGGCCTGGCAGTCCTTC
GTCAGCGTCTTCTCCTCCGGCCACTCGCGCACCGGGAGCGCCGTTGACGGCAGCCGCACCGACGCCGCCACCGGC
GAGGTCCCGTCGCCGCCCGCCAGGGGGCGCAAGAGGAGCGACTGGAGCGACGACGTCTTCCCCTTGACCGACGTC
TCTCCCTCGGGTACCAGGGAGACTGTGTAG
Transcript >Hirsu2|3234
ATGGGCCTCGCGCACGGCTACTACCAGCAGCCAGGCCACGTCGTCGCCGCCGGCGTCGTGCTGCCGCTGCTGGCC
GTCGTCGCCGTCGGCCTGCGCCTGTGGACGCGCCTCAAGCAGGGCCAGGGCGTCCGGGCCGACGACTGGCTCGTC
CTCCCGGCCGCGCTCCTGACCGTCGGCCAGGGCATCAACCTGGTCGTCGGCGTCGCGCTCGGCTCGCTGGCCGCG
CCGCTCGTCATCCCGCCCGGCTTCGAGGCGAACCCGCTGGCGATCCGGACGCCGCAGGTCGTCGCCATGGGCAAG
GCCGAGTTCTTCTTCGAGCTGACGCTGCCGCTGGTCCTCGGCTTCGTCAAGCTGAGCTTCCTGCTCTTCTACGTC
CGCATCTTCGTCGTCAGCCGCGCCGGCGCCGTCAGCCTGCTGCTGCACGGCCTCGTCGCCGTCGTCTCGCTCTGG
ATGCTCGCCTGCTTCCTCGCCCTGCTGTTCGAGTGCCGGCTGCGCTTCTGGGCCGCCTGGGGGTCCGCCCTCGAC
ATTGTCCAGAACTGCGACGACACCTTCGCCTTCGTCTACGCCGTCTGCCTGTCCGACTTTATCGTCGACGTCCTC
ATCATCCTCATTCCCATCCCGCTGGTCTGGCGCTTGAAGGTATCGCGGCGCAAGAAGCTGGCCATGATTGCCGTC
TTCCTCCTCGGAGCCGTGGCCGTCGCGGCGTCTTTGACGCGCCTGATCATCACGCTGCAGCTCGTCTACAGCGCC
TTCGACCCCAGCTCCGACGAGATCTTGGTGGTGACGACGTACATGTACTGGGGCGTGGTCGAGTGTGCCGTCGGC
ATCCTGGCCGCCTGCCTGCCCTCGCTCTCGCTGCTCGCCCGCCTCCTGTCCTTCGAGTCGGCCTGGCAGTCCTTC
GTCAGCGTCTTCTCCTCCGGCCACTCGCGCACCGGGAGCGCCGTTGACGGCAGCCGCACCGACGCCGCCACCGGC
GAGGTCCCGTCGCCGCCCGCCAGGGGGCGCAAGAGGAGCGACTGGAGCGACGACGTCTTCCCCTTGACCGACGTC
TCTCCCTCGGGTACCAGGGAGACTGTGTAG
Gene >Hirsu2|3234
ATGGGCCTCGCGCACGGCTACTACCAGCAGCCAGGCCACGTCGTCGCCGCCGGCGTCGTGCTGCCGCTGCTGGCC
GTCGTCGCCGTCGGCCTGCGCCTGTGGACGCGCCTCAAGCAGGGCCAGGGCGTCCGGGCCGACGACTGGCTCGTC
CTCCCGGCCGCGGTGCGCTGCCTCCCGATTCCCTTGTTCCGTGTCCGAGGAAAGACAGGCGGCGGAGTGACACGG
CGCCGTGCGCTGACTTGCCGACCTCCCAGCTCCTGACCGTCGGCCAGGGCATCAACCTGGTCGTCGGCGTCGCGC
TCGGCTCGCTGGCCGCGCCGCTCGTCATCCCGCCCGGCTTCGAGGCGAACCCGCTGGCGATCCGGACGCCGCAGG
TCGTCGCCATGGGCAAGGTGACGATGCCTCCCGAAACCCCCTCCCTCCCCCTCTGACTCACTCTCCCGGCCTTGG
GACAAGACGGAGAGACGGGGAGAGAAATGGCGAGAGTGTTTTTGTCTGACGAAGCAGGCGGCAGGCCGAGTTCTT
CTTCGAGCTGACGCTGCCGCTGGTCCTCGGCTTCGTCAAGCTGAGCTTCCTGCTCTTCTACGTCCGCATCTTCGT
CGTCAGCCGCGCCGGCGCCGTCAGCCTGCTGCTGCACGGCCTCGTCGCCGTCGTCTCGCTCTGGATGCTCGCCTG
CTTCCTCGCCCTGCTGTTCGAGTGCCGGCTGCGCTTCTGGGCCGCCTGGGGGTCCGCCCTCGACATTGTCCAGAA
CTGCGACGACACCTTCGCCTTCGTCTACGCCGTCTGCCTGTCCGACTTTATCGTCGACGTCCTCATCATCCTCAT
TCCCATCCCGCTGGTACGCAACCCTCCCCCCCCTTCCCAAGCCTGCCCACCCATCTCCCAACCTCCTTGGTCCTT
TTTCTTTCCTTTTTTTTTGGATACCGAGAGAGACTGAGCGAAGCTTTCGTGGTTTCCCCGTTGCAGGTCTGGCGC
TTGAAGGTATCGCGGCGCAAGAAGCTGGCCATGATTGCCGTCTTCCTCCTCGGAGCCGTGTAAGTCGTTTCGGCC
CACCGCGCCGCCCCCTCTGTCTCTGATGGCGGACAACAGGGCCGTCGCGGCGTCTTTGACGCGCCTGATCATCAC
GCTGCAGCTCGTCTACAGCGCCTTCGACCCCAGCTCCGACGAGATCTGTACGTCTTCTACTGCCTCCTCCCCCCC
CGCGCTCCGGATCCCCCCGTTTGGCTGACGACCGAGGCGGCCAGTGGTGGTGACGACGTACATGTACTGGGGCGT
GGTCGAGTGTGCCGTCGGCATCCTGGCCGCCTGCCTGCCCTCGCTCTCGCTGCTCGCCCGCCTCCTGTCCTTCGA
GTCGGCCTGGCAGTCCTTCGTCAGCGTCTTCTCCTCCGGCCACTCGCGCACCGGGAGCGCCGTTGACGGCAGCCG
CACCGACGCCGCCACCGGCGAGGTCCCGTCGCCGCCCGCCAGGGGGCGCAAGAGGAGCGACTGGAGCGACGACGT
CTTCCCCTTGACCGACGTCTCTCCCTCGGGTACCAGGGAGACTGTGTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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