Protein ID | Hirsu2|3221 |
Gene name | |
Location | Contig_1823:2911..4369 |
Strand | + |
Gene length (bp) | 1458 |
Transcript length (bp) | 1137 |
Coding sequence length (bp) | 1137 |
Protein length (aa) | 379 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13489 | Methyltransf_23 | Methyltransferase domain | 3.2E-07 | 117 | 230 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | Nuclear export signal | 0.694 | 0.5091 | 0.0115 | 0.139 | 0.1429 | 0.0161 | 0.3038 | 0.2785 | 0.2137 | 0.0039 |
Orthofinder run ID | 4 |
Orthogroup | 116 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3221 MSCQPWEPLFDDLDDPDDLDDASFSLASTAPDIETIFTRSDGGHETDDYDLLSPPWDDDDPGPAPSYGESTSVSP SVHEDEMAHGRRYHGYRRGRYPLPNDSREQRRDEMNHAMMLEITRGHLFFADIGDHPQKIIDIGTGIGSWVIDVA DLYPSASVTGTDLSAIQPKWVPVNVRMFVDDCEGPDWLHGSGYDLVFFRGMAGVLRDLDGVLERIFPRIKIGGWV EFHEVIPQIMCDDGSMSDDDPLRLFYDAVTEGLRRLGCDPLRTARLEETLDHAKFANVRCITKKVPISAWPRDGH LKAVGILMQTVMLESLDALAAKPLDALGMSPEDRRVLMEKAEKSLEDTTIHRYVNCCFCFGQRRREQDVFSVPPS YYH* |
Coding | >Hirsu2|3221 ATGTCTTGCCAACCGTGGGAGCCGCTGTTCGACGACCTCGACGACCCCGACGACCTCGACGATGCCTCCTTCTCC CTCGCCTCAACCGCTCCGGACATCGAAACCATCTTCACCCGGAGCGACGGCGGCCATGAGACCGACGACTACGAC CTCCTGTCGCCGCCCTGGGACGACGACGACCCGGGCCCGGCCCCGTCGTACGGCGAGTCCACCTCCGTCTCGCCC AGCGTCCACGAAGACGAGATGGCCCACGGTCGGCGCTACCACGGCTATCGAAGGGGCCGTTATCCCTTGCCCAAC GACAGCCGAGAGCAGCGGCGAGACGAGATGAACCACGCCATGATGCTGGAAATCACGAGAGGTCACCTCTTCTTC GCCGACATTGGCGACCACCCGCAAAAGATCATCGACATAGGCACCGGTATCGGAAGTTGGGTCATAGACGTGGCC GATCTGTACCCGAGTGCCAGCGTCACCGGCACGGATCTGTCGGCCATACAGCCCAAATGGGTCCCGGTCAACGTT CGAATGTTCGTCGACGACTGCGAGGGGCCCGACTGGCTTCACGGCTCGGGCTATGACTTGGTCTTCTTCCGGGGC ATGGCGGGCGTTTTGCGCGACCTCGACGGCGTGCTGGAGCGGATCTTCCCGCGCATCAAAATCGGGGGCTGGGTA GAGTTCCATGAAGTGATCCCTCAGATAATGTGCGACGACGGCTCCATGAGCGACGACGACCCGCTGCGCCTCTTC TACGACGCCGTGACCGAGGGTCTGCGCCGCCTTGGCTGTGATCCCCTACGGACGGCCCGTCTGGAGGAGACGCTG GATCACGCCAAATTCGCCAACGTACGATGCATCACCAAGAAGGTTCCGATTTCGGCCTGGCCCCGTGACGGCCAC CTGAAGGCAGTCGGCATCCTCATGCAGACGGTCATGCTCGAGTCGCTAGACGCGCTGGCCGCAAAGCCATTGGAC GCCCTGGGCATGTCGCCCGAGGACCGCCGAGTGCTCATGGAAAAGGCAGAGAAGAGCCTCGAGGACACAACAATC CATCGATACGTCAACTGCTGCTTCTGCTTTGGCCAGAGACGGAGAGAACAGGACGTTTTTTCCGTGCCGCCTTCC TACTACCATTAG |
Transcript | >Hirsu2|3221 ATGTCTTGCCAACCGTGGGAGCCGCTGTTCGACGACCTCGACGACCCCGACGACCTCGACGATGCCTCCTTCTCC CTCGCCTCAACCGCTCCGGACATCGAAACCATCTTCACCCGGAGCGACGGCGGCCATGAGACCGACGACTACGAC CTCCTGTCGCCGCCCTGGGACGACGACGACCCGGGCCCGGCCCCGTCGTACGGCGAGTCCACCTCCGTCTCGCCC AGCGTCCACGAAGACGAGATGGCCCACGGTCGGCGCTACCACGGCTATCGAAGGGGCCGTTATCCCTTGCCCAAC GACAGCCGAGAGCAGCGGCGAGACGAGATGAACCACGCCATGATGCTGGAAATCACGAGAGGTCACCTCTTCTTC GCCGACATTGGCGACCACCCGCAAAAGATCATCGACATAGGCACCGGTATCGGAAGTTGGGTCATAGACGTGGCC GATCTGTACCCGAGTGCCAGCGTCACCGGCACGGATCTGTCGGCCATACAGCCCAAATGGGTCCCGGTCAACGTT CGAATGTTCGTCGACGACTGCGAGGGGCCCGACTGGCTTCACGGCTCGGGCTATGACTTGGTCTTCTTCCGGGGC ATGGCGGGCGTTTTGCGCGACCTCGACGGCGTGCTGGAGCGGATCTTCCCGCGCATCAAAATCGGGGGCTGGGTA GAGTTCCATGAAGTGATCCCTCAGATAATGTGCGACGACGGCTCCATGAGCGACGACGACCCGCTGCGCCTCTTC TACGACGCCGTGACCGAGGGTCTGCGCCGCCTTGGCTGTGATCCCCTACGGACGGCCCGTCTGGAGGAGACGCTG GATCACGCCAAATTCGCCAACGTACGATGCATCACCAAGAAGGTTCCGATTTCGGCCTGGCCCCGTGACGGCCAC CTGAAGGCAGTCGGCATCCTCATGCAGACGGTCATGCTCGAGTCGCTAGACGCGCTGGCCGCAAAGCCATTGGAC GCCCTGGGCATGTCGCCCGAGGACCGCCGAGTGCTCATGGAAAAGGCAGAGAAGAGCCTCGAGGACACAACAATC CATCGATACGTCAACTGCTGCTTCTGCTTTGGCCAGAGACGGAGAGAACAGGACGTTTTTTCCGTGCCGCCTTCC TACTACCATTAG |
Gene | >Hirsu2|3221 ATGTCTTGCCAACCGTGGGAGCCGCTGTTCGACGACCTCGACGACCCCGACGACCTCGACGATGCCTCCTTCTCC CTCGCCTCAACCGCTCCGGACATCGAAACCATCTTCACCCGGAGCGACGGCGGCCATGAGACCGACGACTACGAC CTCCTGTCGCCGCCCTGGGACGACGACGACCCGGGCCCGGCCCCGTCGTACGGCGAGTCCACCTCCGTCTCGCCC AGCGTCCACGAAGACGAGATGGCCCACGGTCGGCGCTACCACGGCTATCGAAGGGGCCGTTATCCCTTGCCCAAC GACAGCCGAGAGCAGCGGCGAGACGAGATGAACCACGCCATGATGCTGGAAATCACGGTACCTGGGCCCATCCGA TCCTCCGCGCGTCTTCGAGTTGGGAGATGCTGAATCAATCTCTCCTTCGCCCCCCTCTCTGTCTCTTCAGAGAGG TCACCTCTTCTTCGCCGACATTGGCGACCACCCGCAAAAGATCATCGACATAGGCACCGGTATCGGTACGTCTCC AGCATCACCTCGCATCTTGGTCGAAGCTGACGCGGGTGACGCGCAGGAAGTTGGGTCATAGACGGTATCCTCTCT CCTCTCCAATTCTCCTCCCGCTCCTCTCCTCTCGGCGCCAGGCTCCATGGGTCGTGGGTCTGATGCGGCGTCCAG TGGCCGATCTGTACCCGAGTGCCAGCGTCACCGGCACGGATCTGTCGGCCATACAGCCCAAATGGGTCCCGGTCA ACGTTCGAATGTTCGTCGACGACTGCGAGGGGCCCGACTGGCTTCACGGCTCGGGCTATGACTTGGTCTTCTTCC GGGGCATGGCGGGCGTTTTGCGCGACCTCGACGGCGTGCTGGAGCGGATCTTCCCGTACGTTTGTTGGATTTTGC CTGCCAGATACCGACGACAACACGACTTCCCTGTCTCGAGCTCCCCGACCGCTGACACTTCAGCGTCCAAGGCGC ATCAAAATCGGGGGCTGGGTAGAGTTCCATGAAGTGATCCCTCAGATAATGTGCGACGACGGCTCCATGAGCGAC GACGACCCGCTGCGCCTCTTCTACGACGCCGTGACCGAGGGTCTGCGCCGCCTTGGCTGTGATCCCCTACGGACG GCCCGTCTGGAGGAGACGCTGGATCACGCCAAATTCGCCAACGTACGATGCATCACCAAGAAGGTTCCGATTTCG GCCTGGCCCCGTGACGGCCACCTGAAGGCAGTCGGCATCCTCATGCAGACGGTCATGCTCGAGTCGCTAGACGCG CTGGCCGCAAAGCCATTGGACGCCCTGGGCATGTCGCCCGAGGACCGCCGAGTGCTCATGGAAAAGGCAGAGAAG AGCCTCGAGGACACAACAATCCATCGATACGTCAACTGCTGCTTCTGCTTTGGCCAGAGACGGAGAGAACAGGAC GTTTTTTCCGTGCCGCCTTCCTACTACCATTAG |