Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|321
Gene name
LocationContig_1061:1222..2672
Strand-
Gene length (bp)1450
Transcript length (bp)1173
Coding sequence length (bp)1173
Protein length (aa) 391

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 65 0.5

Transmembrane Domains

Domain # Start End Length
1 31 53 22
2 66 88 22
3 108 130 22
4 142 164 22
5 187 209 22
6 221 243 22
7 258 280 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|321
MSLSPVSSPALLPDPSTTGSLPVTLQDHGTYVDIAAALGVSWTLLVLGVRLYIRLRLIGPFGADDATACLATLAG
LCQSAVMLVGVRHGVGRRQNLLLRDETDVAMMFDYAANLLYIATVSCSKCSMALLMARLSSFTGHRIAAYALCGF
AAAWGVASLFVIGFQCSFPQPWDVLDPASCSSVFARWVAVEAVGMLIAVLGTMLAVSLVKKLSMAFKTKVIVVSA
FSAQLLVLVPIGFRLGSIRRLPTAYDVTFDMTSAAITTLVAGHLTVMAASFPCFRQLLRAFDGGLGMSRKLSPKL
GSSGSRSQRSHALQSLGGDDGDARARGGRSRGSSTKFRTGVITQVVSQATAGPAGPAGGDESGSVSSFGSDKAII
WRTHEVEVHYEPRDQ*
Coding >Hirsu2|321
ATGTCGTTGTCGCCCGTGTCCTCGCCCGCCTTGTTGCCCGACCCCTCGACGACTGGGAGCCTCCCCGTCACGTTG
CAAGACCACGGCACCTATGTCGACATCGCCGCCGCCCTCGGCGTCTCCTGGACGCTGCTGGTCCTGGGCGTCCGG
CTGTACATCCGCCTGCGCCTGATCGGCCCCTTTGGCGCCGACGATGCCACCGCCTGCTTGGCCACGCTTGCCGGC
CTGTGTCAGTCGGCGGTGATGCTCGTCGGCGTCAGGCACGGCGTCGGCAGACGGCAGAACCTGCTGCTGCGTGAC
GAGACCGACGTGGCCATGATGTTCGACTACGCCGCCAACCTACTCTACATCGCCACCGTTAGCTGCTCCAAGTGC
TCCATGGCCCTGCTCATGGCCCGCCTCAGCAGCTTCACAGGCCACCGCATCGCCGCCTACGCCCTGTGCGGCTTC
GCCGCCGCCTGGGGGGTGGCCTCCCTCTTCGTCATCGGCTTCCAGTGCAGCTTCCCCCAGCCCTGGGACGTCTTG
GATCCCGCCAGCTGCTCCTCCGTCTTTGCGCGCTGGGTGGCCGTCGAGGCCGTGGGCATGCTCATTGCGGTACTC
GGCACAATGCTCGCCGTCTCCCTCGTCAAGAAGCTGAGCATGGCCTTCAAGACAAAGGTCATTGTCGTCTCGGCC
TTCTCGGCTCAGCTGCTCGTCCTCGTGCCCATCGGCTTCCGTCTGGGCTCCATCCGCCGCCTGCCGACGGCATAC
GACGTCACCTTCGACATGACCAGCGCCGCCATCACGACGCTCGTGGCCGGTCACCTGACCGTCATGGCCGCCAGC
TTTCCCTGCTTCCGCCAGCTCCTCCGAGCCTTCGATGGCGGCCTCGGCATGTCCAGGAAGCTATCGCCCAAGCTG
GGCTCCTCCGGCAGCCGGTCCCAGCGCAGCCACGCCCTCCAGTCTCTCGGGGGCGACGACGGAGACGCGCGGGCC
CGGGGCGGGCGGAGCCGCGGCAGCAGCACCAAGTTCCGGACGGGTGTCATCACCCAGGTCGTCAGCCAGGCCACT
GCCGGACCGGCAGGTCCCGCCGGCGGCGACGAGAGCGGCAGCGTCTCGAGCTTCGGCAGCGACAAGGCCATCATC
TGGAGGACGCACGAGGTCGAGGTCCACTACGAGCCTCGCGACCAGTGA
Transcript >Hirsu2|321
ATGTCGTTGTCGCCCGTGTCCTCGCCCGCCTTGTTGCCCGACCCCTCGACGACTGGGAGCCTCCCCGTCACGTTG
CAAGACCACGGCACCTATGTCGACATCGCCGCCGCCCTCGGCGTCTCCTGGACGCTGCTGGTCCTGGGCGTCCGG
CTGTACATCCGCCTGCGCCTGATCGGCCCCTTTGGCGCCGACGATGCCACCGCCTGCTTGGCCACGCTTGCCGGC
CTGTGTCAGTCGGCGGTGATGCTCGTCGGCGTCAGGCACGGCGTCGGCAGACGGCAGAACCTGCTGCTGCGTGAC
GAGACCGACGTGGCCATGATGTTCGACTACGCCGCCAACCTACTCTACATCGCCACCGTTAGCTGCTCCAAGTGC
TCCATGGCCCTGCTCATGGCCCGCCTCAGCAGCTTCACAGGCCACCGCATCGCCGCCTACGCCCTGTGCGGCTTC
GCCGCCGCCTGGGGGGTGGCCTCCCTCTTCGTCATCGGCTTCCAGTGCAGCTTCCCCCAGCCCTGGGACGTCTTG
GATCCCGCCAGCTGCTCCTCCGTCTTTGCGCGCTGGGTGGCCGTCGAGGCCGTGGGCATGCTCATTGCGGTACTC
GGCACAATGCTCGCCGTCTCCCTCGTCAAGAAGCTGAGCATGGCCTTCAAGACAAAGGTCATTGTCGTCTCGGCC
TTCTCGGCTCAGCTGCTCGTCCTCGTGCCCATCGGCTTCCGTCTGGGCTCCATCCGCCGCCTGCCGACGGCATAC
GACGTCACCTTCGACATGACCAGCGCCGCCATCACGACGCTCGTGGCCGGTCACCTGACCGTCATGGCCGCCAGC
TTTCCCTGCTTCCGCCAGCTCCTCCGAGCCTTCGATGGCGGCCTCGGCATGTCCAGGAAGCTATCGCCCAAGCTG
GGCTCCTCCGGCAGCCGGTCCCAGCGCAGCCACGCCCTCCAGTCTCTCGGGGGCGACGACGGAGACGCGCGGGCC
CGGGGCGGGCGGAGCCGCGGCAGCAGCACCAAGTTCCGGACGGGTGTCATCACCCAGGTCGTCAGCCAGGCCACT
GCCGGACCGGCAGGTCCCGCCGGCGGCGACGAGAGCGGCAGCGTCTCGAGCTTCGGCAGCGACAAGGCCATCATC
TGGAGGACGCACGAGGTCGAGGTCCACTACGAGCCTCGCGACCAGTGA
Gene >Hirsu2|321
ATGTCGTTGTCGCCCGTGTCCTCGCCCGCCTTGTTGCCCGACCCCTCGACGACTGGGAGCCTCCCCGTCACGTTG
CAAGACCACGGCACCTATGTCGACATCGCCGCCGCCCTCGGCGTCTCCTGGACGCTGCTGGTCCTGGGCGTCCGG
CTGTACATCCGCCTGCGCCTGATCGGCCCCTTTGGCGCCGACGATGCCACCGCCTGCTTGGCCACGGTAAGTTTG
TCCGGTCTCTTCCATCTTGTTGTCGGCCACTGACGTCAGGCCCTGCATCCACAGCTTGCCGGCCTGTGTCAGTCG
GCGGTGATGCTCGTCGGCGTCAGGCACGGCGTCGGCAGACGGCAGAACCTGCTGCTGCGTGACGAGACCGACGTG
GCCATGATGGTATGCCATCACCCGGCCTACCCTTTTCCCATCATGTCATCTCACCTTTCTCCGTCTCCCTCCCCA
CTCTGTCCCCTTCATCTTTCTCTCCCCTTCCCTCCTCGTACCCTCTCGACGATGATGATGCCAACACGGCCGTAC
GCAGTTCGACTACGCCGCCAACCTACTCTACATCGCCACCGTTAGCTGCTCCAAGTGCTCCATGGCCCTGCTCAT
GGCCCGCCTCAGCAGCTTCACAGGCCACCGCATCGCCGCCTACGCCCTGTGCGGCTTCGCCGCCGCCTGGGGGGT
GGCCTCCCTCTTCGTCATCGGCTTCCAGTGCAGCTTCCCCCAGCCCTGGGACGTCTTGGATCCCGCCAGCTGCTC
CTCCGTCGTACGCTGCCCTTTTGGTCCTCTTCCGCTTCAAGACGAGTGGCCACACGGGTGCTGACCGAGGACGCA
GTTTGCGCGCTGGGTGGCCGTCGAGGCCGTGGGCATGCTCATTGCGGTACTCGGCACAATGCTCGCCGTCTCCCT
CGTCAAGAAGCTGAGCATGGCCTTCAAGACAAAGGTCATTGTCGTCTCGGCCTTCTCGGCTCAGCTGCTCGTCCT
CGTGCCCATCGGCTTCCGTCTGGGCTCCATCCGCCGCCTGCCGACGGCATACGACGTCACCTTCGACATGACCAG
CGCCGCCATCACGACGCTCGTGGCCGGTCACCTGACCGTCATGGCCGCCAGCTTTCCCTGCTTCCGCCAGCTCCT
CCGAGCCTTCGATGGCGGCCTCGGCATGTCCAGGAAGCTATCGCCCAAGCTGGGCTCCTCCGGCAGCCGGTCCCA
GCGCAGCCACGCCCTCCAGTCTCTCGGGGGCGACGACGGAGACGCGCGGGCCCGGGGCGGGCGGAGCCGCGGCAG
CAGCACCAAGTTCCGGACGGGTGTCATCACCCAGGTCGTCAGCCAGGCCACTGCCGGACCGGCAGGTCCCGCCGG
CGGCGACGAGAGCGGCAGCGTCTCGAGCTTCGGCAGCGACAAGGCCATCATCTGGAGGACGCACGAGGTCGAGGT
CCACTACGAGCCTCGCGACCAGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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