Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|3206
Gene name
Location	Contig_1819:3495..4713
Strand	-
Gene length (bp)	1218
Transcript length (bp)	1071
Coding sequence length (bp)	1071
Protein length (aa)	357

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13422	DUF4110	Domain of unknown function (DUF4110)	1.6E-31	256	346

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q08979\|KEL3_YEAST	Kelch repeat-containing protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KEL3 PE=1 SV=1	3	170	8.0E-17
sp\|Q8TBB5\|KLDC4_HUMAN	Kelch domain-containing protein 4 OS=Homo sapiens GN=KLHDC4 PE=1 SV=1	9	211	2.0E-14
sp\|Q5R8W1\|KLDC4_PONAB	Kelch domain-containing protein 4 OS=Pongo abelii GN=KLHDC4 PE=2 SV=1	9	172	1.0E-13
sp\|Q921I2\|KLDC4_MOUSE	Kelch domain-containing protein 4 OS=Mus musculus GN=Klhdc4 PE=2 SV=2	9	172	7.0E-13

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|3206 MTWHKGRGILFGGVHDVEQGEDGMDSEFFNQLFAWNIERNRFMPLGLRKPRQQQQRRGGPEQRVGRRGRAQANEE ELLRQLAALETGASLDDADGIELEKKGAEEARDDDEQPAREMPVATEPPHARFNAQLAVQADVLYIYGGTFEKGD VEVTFDDLHAIDLSKLDGCKEIFNRPVEDWIESEDEDDEDEDEDDEEDEDEDDEDDEEEPGGDGPEQRLHTASKR KKKADSISDTASEAASAAPSEEDETETTATSVDDGLPHPRPFESRREFFVRTSAEWQEVLMTSLRWKGTQPEALT IKELKSKAFELSEEKWWDCREEITALEEEQEAAGIQEVVSLAERGDAAAAGAARRR*
Coding	>Hirsu2\|3206 ATGACGTGGCACAAGGGCCGCGGCATCCTCTTCGGCGGCGTCCACGACGTCGAGCAGGGCGAGGACGGCATGGAC AGCGAGTTCTTCAACCAGCTGTTCGCGTGGAACATTGAGCGCAACCGCTTCATGCCCCTGGGGCTCCGCAAGCCC CGCCAGCAGCAGCAGAGGAGGGGCGGGCCGGAGCAGCGCGTCGGCCGCCGCGGCCGGGCCCAGGCCAACGAGGAG GAGCTCCTGCGGCAGCTCGCCGCCCTCGAGACGGGCGCCTCCCTGGACGACGCCGACGGCATCGAGCTGGAGAAG AAGGGGGCGGAAGAGGCGCGGGACGACGACGAGCAGCCGGCGAGGGAGATGCCGGTCGCGACGGAACCGCCGCAC GCGAGGTTCAACGCGCAGCTGGCCGTCCAGGCCGACGTGCTGTACATCTACGGCGGCACCTTTGAGAAGGGGGAC GTGGAGGTTACGTTTGACGACCTGCACGCCATCGACCTGAGCAAGCTCGACGGCTGCAAAGAAATCTTTAACCGG CCCGTCGAGGACTGGATCGAGTCTGAGGACGAGGACGACGAGGACGAGGACGAGGACGACGAGGAAGACGAGGAC GAAGACGACGAGGACGACGAGGAAGAGCCCGGCGGTGACGGGCCGGAGCAGCGGCTGCACACGGCCAGCAAGCGG AAGAAGAAGGCGGACTCCATCTCGGACACGGCCTCGGAGGCGGCTTCGGCGGCCCCGTCGGAAGAGGACGAGACG GAGACGACGGCGACATCGGTGGACGACGGCCTCCCTCACCCACGACCGTTCGAGTCTCGGCGCGAGTTCTTCGTG CGGACGTCGGCGGAATGGCAGGAGGTGCTGATGACGAGCCTGCGGTGGAAGGGCACGCAGCCAGAGGCGCTGACG ATCAAGGAGCTCAAGTCGAAGGCGTTCGAGCTGAGCGAGGAGAAGTGGTGGGACTGCCGGGAGGAGATCACGGCG CTGGAGGAGGAGCAGGAGGCGGCGGGCATCCAGGAGGTGGTGAGCCTGGCGGAGAGGGGCGACGCCGCGGCGGCG GGCGCGGCGCGGCGGCGCTGA
Transcript	>Hirsu2\|3206 ATGACGTGGCACAAGGGCCGCGGCATCCTCTTCGGCGGCGTCCACGACGTCGAGCAGGGCGAGGACGGCATGGAC AGCGAGTTCTTCAACCAGCTGTTCGCGTGGAACATTGAGCGCAACCGCTTCATGCCCCTGGGGCTCCGCAAGCCC CGCCAGCAGCAGCAGAGGAGGGGCGGGCCGGAGCAGCGCGTCGGCCGCCGCGGCCGGGCCCAGGCCAACGAGGAG GAGCTCCTGCGGCAGCTCGCCGCCCTCGAGACGGGCGCCTCCCTGGACGACGCCGACGGCATCGAGCTGGAGAAG AAGGGGGCGGAAGAGGCGCGGGACGACGACGAGCAGCCGGCGAGGGAGATGCCGGTCGCGACGGAACCGCCGCAC GCGAGGTTCAACGCGCAGCTGGCCGTCCAGGCCGACGTGCTGTACATCTACGGCGGCACCTTTGAGAAGGGGGAC GTGGAGGTTACGTTTGACGACCTGCACGCCATCGACCTGAGCAAGCTCGACGGCTGCAAAGAAATCTTTAACCGG CCCGTCGAGGACTGGATCGAGTCTGAGGACGAGGACGACGAGGACGAGGACGAGGACGACGAGGAAGACGAGGAC GAAGACGACGAGGACGACGAGGAAGAGCCCGGCGGTGACGGGCCGGAGCAGCGGCTGCACACGGCCAGCAAGCGG AAGAAGAAGGCGGACTCCATCTCGGACACGGCCTCGGAGGCGGCTTCGGCGGCCCCGTCGGAAGAGGACGAGACG GAGACGACGGCGACATCGGTGGACGACGGCCTCCCTCACCCACGACCGTTCGAGTCTCGGCGCGAGTTCTTCGTG CGGACGTCGGCGGAATGGCAGGAGGTGCTGATGACGAGCCTGCGGTGGAAGGGCACGCAGCCAGAGGCGCTGACG ATCAAGGAGCTCAAGTCGAAGGCGTTCGAGCTGAGCGAGGAGAAGTGGTGGGACTGCCGGGAGGAGATCACGGCG CTGGAGGAGGAGCAGGAGGCGGCGGGCATCCAGGAGGTGGTGAGCCTGGCGGAGAGGGGCGACGCCGCGGCGGCG GGCGCGGCGCGGCGGCGCTGA
Gene	>Hirsu2\|3206 ATGACGTGGCACAAGGGCCGCGGCATCCTCTTCGGCGGCGTCCACGACGTCGAGCAGGGCGAGGACGGCATGGAC AGCGAGTTCTTCAACCAGCTGTTCGCGTGGAACATTGAGCGCAACCGCTTCATGCCCCTGGGGCTCCGCAAGCCC CGCCAGCAGCAGCAGAGGAGGGGCGGGCCGGAGCAGCGCGTCGGCCGCCGCGGCCGGGCCCAGGCCAACGAGGAG GAGCTCCTGCGGCAGCTCGCCGCCCTCGAGACGGGCGCCTCCCTGGACGACGCCGACGGCATCGAGCTGGAGAAG AAGGGGGCGGAAGAGGCGCGGGACGACGACGAGCAGCCGGCGAGGGAGATGCCGGTCGCGACGGAACCGCCGCAC GCGAGGTTCAACGCGCAGCTGGCCGTCCAGGCCGACGTGCTGTACATCTACGGCGGCACCTTTGAGAAGGGGGAC GTGGAGGTTACGTTTGACGACCTGCACGCCATCGACCTGAGCAAGCTCGACGGCTGCAAAGAAATCTTTAACCGG CCCGTCGAGGACTGGATCGTGAGTTTCGGTCCTGGCTACGCTCGAGAAGCTATCGCTCTAACAGGGCTTCATAGG AGTCTGAGGACGAGGACGACGAGGACGAGGACGAGGACGACGAGGAAGACGAGGACGAAGACGACGAGGACGACG AGGAAGAGCCCGGCGGTGACGGGCCGGAGCAGCGGCTGCACACGGCCAGCAAGCGGAAGAAGAAGGCGGACTCCA TCTCGGACACGGCCTCGGAGGCGGCTTCGGCGGCCCCGTCGGAAGAGGACGAGACGGAGACGACGGCGACATCGG TGGACGACGGCCTCCCTCACCCACGAGTAAGCTGCCCTCCCCCGCCGACCCGGCCCGATTTCCGCGAGGAGACAA GGGGAAGGGGGTTCGTCGCCGGTACTGACCCGTTGCGCGCAGCCGTTCGAGTCTCGGCGCGAGTTCTTCGTGCGG ACGTCGGCGGAATGGCAGGAGGTGCTGATGACGAGCCTGCGGTGGAAGGGCACGCAGCCAGAGGCGCTGACGATC AAGGAGCTCAAGTCGAAGGCGTTCGAGCTGAGCGAGGAGAAGTGGTGGGACTGCCGGGAGGAGATCACGGCGCTG GAGGAGGAGCAGGAGGCGGCGGGCATCCAGGAGGTGGTGAGCCTGGCGGAGAGGGGCGACGCCGCGGCGGCGGGC GCGGCGCGGCGGCGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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