Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|32
Gene name
LocationContig_100:26757..27045
Strand+
Gene length (bp)288
Transcript length (bp)288
Coding sequence length (bp)288
Protein length (aa) 96

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular 0.3802 0.3277 0.564 0.0685 0.4223 0.2479 0.2382 0.0727 0.3976 0.0508

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4842
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5488
Ophiocordyceps australis 1348a (Ghana) OphauG2|957
Ophiocordyceps camponoti-floridani Ophcf2|03800
Ophiocordyceps camponoti-rufipedis Ophun1|2557
Ophiocordyceps subramaniannii Hirsu2|10838
Ophiocordyceps subramaniannii Hirsu2|32 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|32
MGMSSFDLVTLQSFFRSSTISSARVDGSGGVNVNYGISAALGGDMDLPGRFDKMAARMTDYLRSGPNSQLARGVR
VEPVVYVSIRWAWLLGPAAM*
Coding >Hirsu2|32
ATGGGAATGAGCTCTTTCGACCTTGTAACCTTGCAGTCATTCTTCAGGTCTAGCACCATCTCATCAGCACGGGTG
GACGGATCAGGAGGTGTCAATGTCAATTACGGTATCAGCGCTGCCCTGGGAGGCGACATGGACCTCCCCGGCCGG
TTCGACAAGATGGCAGCTAGAATGACGGATTACCTGCGTTCGGGACCCAACTCGCAGCTCGCCCGTGGAGTGAGG
GTCGAGCCAGTCGTCTACGTGTCGATCCGCTGGGCGTGGTTGCTTGGCCCTGCCGCCATGTAG
Transcript >Hirsu2|32
ATGGGAATGAGCTCTTTCGACCTTGTAACCTTGCAGTCATTCTTCAGGTCTAGCACCATCTCATCAGCACGGGTG
GACGGATCAGGAGGTGTCAATGTCAATTACGGTATCAGCGCTGCCCTGGGAGGCGACATGGACCTCCCCGGCCGG
TTCGACAAGATGGCAGCTAGAATGACGGATTACCTGCGTTCGGGACCCAACTCGCAGCTCGCCCGTGGAGTGAGG
GTCGAGCCAGTCGTCTACGTGTCGATCCGCTGGGCGTGGTTGCTTGGCCCTGCCGCCATGTAG
Gene >Hirsu2|32
ATGGGAATGAGCTCTTTCGACCTTGTAACCTTGCAGTCATTCTTCAGGTCTAGCACCATCTCATCAGCACGGGTG
GACGGATCAGGAGGTGTCAATGTCAATTACGGTATCAGCGCTGCCCTGGGAGGCGACATGGACCTCCCCGGCCGG
TTCGACAAGATGGCAGCTAGAATGACGGATTACCTGCGTTCGGGACCCAACTCGCAGCTCGCCCGTGGAGTGAGG
GTCGAGCCAGTCGTCTACGTGTCGATCCGCTGGGCGTGGTTGCTTGGCCCTGCCGCCATGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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