Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3190
Gene name
LocationContig_1813:560..1698
Strand+
Gene length (bp)1138
Transcript length (bp)816
Coding sequence length (bp)816
Protein length (aa) 272

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 52 0.45

Transmembrane Domains

Domain # Start End Length
1 232 254 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3190
MTTLFCSRPPFRTVHPSLPRPSPGRAIGKRQAAREAVAVAAVAVAAAAAAAGNDDDGGDAVEGKKGFHSTSARPW
RGCSNRLGRGRRSGQSLARRDNAPKERIRATAPSPTRSRQYLDPRPFASESAAAQLLHGRRRFVALPDDEDNRLQ
LVGGGGPWRRNGDAPRPRPKLVFSSPSSRLLFAFWISWLFAAMALEPTPPSPPRSAGHPCPPAISRPLPGRELLT
DAIAACWRFLVLLVLLLVLLHLFLLLLAAPSSQKVPACRHSKPRNE*
Coding >Hirsu2|3190
ATGACAACCTTGTTTTGTTCCCGCCCTCCCTTTCGTACCGTCCACCCCTCTCTTCCCCGCCCCTCTCCCGGAAGA
GCGATCGGGAAGAGGCAGGCGGCTCGGGAGGCCGTCGCCGTCGCCGCCGTCGCCGTCGCCGCCGCCGCCGCCGCT
GCCGGCAACGACGACGACGGTGGAGATGCTGTCGAGGGGAAGAAGGGGTTCCATTCGACCTCGGCGCGGCCGTGG
CGCGGCTGCTCCAATCGGCTCGGCCGTGGGCGTCGGTCAGGCCAAAGTTTGGCGCGCAGGGACAACGCGCCCAAG
GAGAGGATCCGTGCGACGGCGCCCTCACCGACACGCAGCCGGCAGTACCTGGACCCAAGGCCATTTGCCAGTGAA
AGCGCGGCCGCTCAGCTCCTCCACGGCCGCCGTCGCTTCGTTGCTTTGCCCGATGACGAGGACAACCGGCTGCAG
CTGGTTGGTGGTGGTGGCCCGTGGCGCCGCAACGGGGATGCCCCCCGTCCGCGGCCCAAACTCGTCTTCTCCTCG
CCTTCTTCCCGGCTTCTTTTTGCCTTCTGGATTTCTTGGCTCTTCGCCGCCATGGCGCTCGAGCCCACACCCCCC
TCCCCTCCTCGAAGTGCTGGCCACCCCTGCCCGCCCGCGATATCCCGGCCGCTACCAGGTAGGGAGTTGTTGACT
GATGCTATAGCGGCATGCTGGCGCTTTCTTGTGCTACTTGTTCTTCTTCTTGTTCTTCTTCATCTTTTTCTTCTT
CTTCTTGCTGCTCCGTCATCCCAAAAGGTCCCGGCCTGCCGCCACAGCAAGCCAAGGAACGAGTGA
Transcript >Hirsu2|3190
ATGACAACCTTGTTTTGTTCCCGCCCTCCCTTTCGTACCGTCCACCCCTCTCTTCCCCGCCCCTCTCCCGGAAGA
GCGATCGGGAAGAGGCAGGCGGCTCGGGAGGCCGTCGCCGTCGCCGCCGTCGCCGTCGCCGCCGCCGCCGCCGCT
GCCGGCAACGACGACGACGGTGGAGATGCTGTCGAGGGGAAGAAGGGGTTCCATTCGACCTCGGCGCGGCCGTGG
CGCGGCTGCTCCAATCGGCTCGGCCGTGGGCGTCGGTCAGGCCAAAGTTTGGCGCGCAGGGACAACGCGCCCAAG
GAGAGGATCCGTGCGACGGCGCCCTCACCGACACGCAGCCGGCAGTACCTGGACCCAAGGCCATTTGCCAGTGAA
AGCGCGGCCGCTCAGCTCCTCCACGGCCGCCGTCGCTTCGTTGCTTTGCCCGATGACGAGGACAACCGGCTGCAG
CTGGTTGGTGGTGGTGGCCCGTGGCGCCGCAACGGGGATGCCCCCCGTCCGCGGCCCAAACTCGTCTTCTCCTCG
CCTTCTTCCCGGCTTCTTTTTGCCTTCTGGATTTCTTGGCTCTTCGCCGCCATGGCGCTCGAGCCCACACCCCCC
TCCCCTCCTCGAAGTGCTGGCCACCCCTGCCCGCCCGCGATATCCCGGCCGCTACCAGGTAGGGAGTTGTTGACT
GATGCTATAGCGGCATGCTGGCGCTTTCTTGTGCTACTTGTTCTTCTTCTTGTTCTTCTTCATCTTTTTCTTCTT
CTTCTTGCTGCTCCGTCATCCCAAAAGGTCCCGGCCTGCCGCCACAGCAAGCCAAGGAACGAGTGA
Gene >Hirsu2|3190
ATGACAACCTTGTTTTGTTCCCGCCCTCCCTTTCGTACCGTCCACCCCTCTCTTCCCCGCCCCTCTCCCGGAAGA
GCGATCGGGAAGAGGCAGGCGGCTCGGGAGGCCGTCGCCGTCGCCGCCGTCGCCGTCGCCGCCGCCGCCGCCGCT
GCCGGCAACGACGACGACGGTGGAGATGCTGTCGAGGGGAAGAAGGGGTTCCATTCGACCTCGGCGCGGCCGTGG
CGCGGCTGCTCCAATCGGCTCGGCCGTGGGCGTCGGTCAGGCCAAAGTTTGGCGCGCAGGGACAACGCGCCCAAG
GAGAGGATCCGTGCGACGGCGCCCTCACCGACACGCAGCCGGCAGTACCTGGTAAGCTGGCATGCATGGCGAGGC
AAACAGCGACAGCCATCATCAGTCATCGCCGTCTGGCGCCTTACCGAGTCATCCCGGAGGCGGGGGCAGGCCAAC
TGAGAAGGCCAAGACAGGCCGAAGCCTTATTCAGTCCCTAGCGTGATGGGTCCCTCGTCCAATACGGTGGACCTT
GCCTCAGGAGGCCGAGCAGGAATCGCAGCAGCCCGGCGATGGGACACGACAATAGAGGTACAGTAGGAAGTCTGG
GAGGCAAGTATAAAGTCAAAACCGTAGACCCAGCCCGGAGAGTTTCTGTCAGCGAGCGCTGCAGCCGAGGCAGGA
CCCAAGGCCATTTGCCAGTGAAAGCGCGGCCGCTCAGCTCCTCCACGGCCGCCGTCGCTTCGTTGCTTTGCCCGA
TGACGAGGACAACCGGCTGCAGCTGGTTGGTGGTGGTGGCCCGTGGCGCCGCAACGGGGATGCCCCCCGTCCGCG
GCCCAAACTCGTCTTCTCCTCGCCTTCTTCCCGGCTTCTTTTTGCCTTCTGGATTTCTTGGCTCTTCGCCGCCAT
GGCGCTCGAGCCCACACCCCCCTCCCCTCCTCGAAGTGCTGGCCACCCCTGCCCGCCCGCGATATCCCGGCCGCT
ACCAGGTAGGGAGTTGTTGACTGATGCTATAGCGGCATGCTGGCGCTTTCTTGTGCTACTTGTTCTTCTTCTTGT
TCTTCTTCATCTTTTTCTTCTTCTTCTTGCTGCTCCGTCATCCCAAAAGGTCCCGGCCTGCCGCCACAGCAAGCC
AAGGAACGAGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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