Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|3187
Gene name
Location	Contig_1811:3111..4645
Strand	-
Gene length (bp)	1534
Transcript length (bp)	996
Coding sequence length (bp)	996
Protein length (aa)	332

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13621	Cupin_8	Cupin-like domain	3.7E-67	37	310

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P0C872\|JMJD7_MOUSE	JmjC domain-containing protein 7 OS=Mus musculus GN=Jmjd7 PE=1 SV=1	2	309	2.0E-51
sp\|P0C870\|JMJD7_HUMAN	JmjC domain-containing protein 7 OS=Homo sapiens GN=JMJD7 PE=1 SV=1	2	309	3.0E-51
sp\|Q54CS7\|JMJCE_DICDI	JmjC domain-containing protein E OS=Dictyostelium discoideum GN=jcdE PE=3 SV=2	32	321	1.0E-42
sp\|P59723\|HIF1N_DANRE	Hypoxia-inducible factor 1-alpha inhibitor OS=Danio rerio GN=hif1an PE=2 SV=2	176	305	2.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|3187 MATLSTMDPALRDLICTYNELNSPFVEELDSEPSPLEFMRFVARSAPFVVRGGASSWKATRKWNSAYLKSSLEGQ TINVAVTPTGYADSPTFSPQHDVTVFAKPCEESQPFEQFLSYITRQETDSTFPPDSEVRYAQTQNDNLRDEYLAL FPDVQKDIPFARIALQKSPDALNIWIGNSRSVTAIHKDNFENIYVQVVGRKHFLLLPPLCQPCMNEKLLPPATFT REGQGLSLRLDEPCEPVPFATWDPDEAQADATSLSHLARPLRVTLEPGDMLYLPALWYHKVSQSCLEGGEGFNVA INYWYDMEFRGTLFPLSVFLRSLGTDQDAME*
Coding	>Hirsu2\|3187 ATGGCAACTCTTAGTACAATGGATCCTGCACTAAGGGACTTGATTTGCACATACAACGAGCTGAACAGCCCCTTC GTAGAGGAGCTCGATTCGGAGCCAAGCCCCCTTGAGTTTATGCGCTTCGTCGCCCGCAGCGCACCATTTGTTGTC CGTGGCGGAGCATCGTCTTGGAAAGCCACGCGGAAATGGAACTCGGCATACTTGAAATCTAGTCTGGAAGGTCAG ACAATCAACGTTGCCGTCACTCCAACGGGCTACGCCGACTCACCAACATTTTCTCCCCAGCATGATGTCACCGTC TTTGCGAAACCTTGTGAGGAGTCTCAGCCGTTCGAACAGTTCTTGTCCTACATCACTCGACAAGAGACCGATTCG ACCTTCCCTCCAGACTCGGAGGTGAGGTATGCGCAGACCCAAAACGATAACCTTCGGGACGAGTACCTGGCACTA TTCCCTGATGTACAAAAGGATATACCTTTCGCTCGTATAGCCCTCCAGAAATCACCTGATGCCTTAAATATTTGG ATAGGAAATTCTCGGTCTGTTACAGCTATTCACAAGGACAACTTTGAGAATATCTATGTCCAAGTTGTTGGCAGG AAACATTTCCTTCTCTTGCCGCCCCTATGCCAACCTTGCATGAATGAGAAGCTCCTCCCTCCCGCCACCTTCACT CGTGAGGGCCAAGGGCTATCTCTGCGCCTCGATGAGCCTTGCGAACCAGTTCCATTCGCAACTTGGGATCCGGAC GAGGCTCAAGCTGACGCTACCTCTCTGTCGCACCTCGCGAGGCCACTGCGTGTCACTCTCGAGCCTGGCGACATG CTGTATTTGCCGGCCCTGTGGTACCACAAAGTCTCACAATCTTGCCTGGAAGGCGGTGAGGGCTTTAATGTTGCA ATTAATTACTGGTACGACATGGAGTTTCGTGGGACGTTGTTTCCGTTATCTGTGTTTCTACGCAGCCTCGGCACA GACCAGGACGCCATGGAGTAG
Transcript	>Hirsu2\|3187 ATGGCAACTCTTAGTACAATGGATCCTGCACTAAGGGACTTGATTTGCACATACAACGAGCTGAACAGCCCCTTC GTAGAGGAGCTCGATTCGGAGCCAAGCCCCCTTGAGTTTATGCGCTTCGTCGCCCGCAGCGCACCATTTGTTGTC CGTGGCGGAGCATCGTCTTGGAAAGCCACGCGGAAATGGAACTCGGCATACTTGAAATCTAGTCTGGAAGGTCAG ACAATCAACGTTGCCGTCACTCCAACGGGCTACGCCGACTCACCAACATTTTCTCCCCAGCATGATGTCACCGTC TTTGCGAAACCTTGTGAGGAGTCTCAGCCGTTCGAACAGTTCTTGTCCTACATCACTCGACAAGAGACCGATTCG ACCTTCCCTCCAGACTCGGAGGTGAGGTATGCGCAGACCCAAAACGATAACCTTCGGGACGAGTACCTGGCACTA TTCCCTGATGTACAAAAGGATATACCTTTCGCTCGTATAGCCCTCCAGAAATCACCTGATGCCTTAAATATTTGG ATAGGAAATTCTCGGTCTGTTACAGCTATTCACAAGGACAACTTTGAGAATATCTATGTCCAAGTTGTTGGCAGG AAACATTTCCTTCTCTTGCCGCCCCTATGCCAACCTTGCATGAATGAGAAGCTCCTCCCTCCCGCCACCTTCACT CGTGAGGGCCAAGGGCTATCTCTGCGCCTCGATGAGCCTTGCGAACCAGTTCCATTCGCAACTTGGGATCCGGAC GAGGCTCAAGCTGACGCTACCTCTCTGTCGCACCTCGCGAGGCCACTGCGTGTCACTCTCGAGCCTGGCGACATG CTGTATTTGCCGGCCCTGTGGTACCACAAAGTCTCACAATCTTGCCTGGAAGGCGGTGAGGGCTTTAATGTTGCA ATTAATTACTGGTACGACATGGAGTTTCGTGGGACGTTGTTTCCGTTATCTGTGTTTCTACGCAGCCTCGGCACA GACCAGGACGCCATGGAGTAG
Gene	>Hirsu2\|3187 ATGGCAACTCTTAGTACAATGGATCCTGCACTAAGGGACTTGATTTGCACATACAACGAGCTGAACAGCCCCTTC GTAGAGGAGCTCGATTCGGAGCCAAGCCCCCTTGAGTTTATGCGCTTCGTCGCCCGCAGCGCACCATTTGTTGTC CGTGGCGGAGCATCGTCTTGGAAAGCCACGCGGAAATGGAACTCGGCATACTTGAAATCTAGTCTGGAAGGTCAG ACAATCAACGTTGCCGTCACTCCAACGGGGTAAGCAGCCGCCAATCGTCACTTTTGCCCTCAGTCTACATATACT CCTTAACTGGTGGAGGCGAAGATTACGACAAAGAATATGTAATAAAATACAGGAAGAGGCCGGAGCGACGGGCGA GTGAAACAAGGATTGAGGAACCCACTCGAGACGCCTGTAGCTCACGAGACCTGTAGATTTACTTGCTAACCGAGC TCTTCGCCGGCTGCATAGCTACGCCGACTCACCAACATTTTCTCCCCAGCATGATGTCACCGTCTTTGCGAAACC TTGTGAGGAGTCTCAGCCGTTCGAACAGTTCTTGTCCTACATCACTCGACAAGAGACCGATTCGACCTTCCCTCC AGACTCGGAGGTGAGGTATGCGCAGACCCGTCAGCCAGCTTCCCCCCTCTCCCCCGGGCCCGCGCAATTCCTCAG TGGCCGGCCCTTCGTGATGCATTGATGGCCTACATCTGACTACAACTACAAGTTGCAGAAAACGATAACCTTCGG GACGAGTACCTGGCACTATTCCCTGATGTACAAAAGGATATACCTTTCGCTCGTATAGCCCTCCAGAAATCACCT GATGCCTTAAATATTTGGATAGGAAATTCTCGGTCTGTTACAGCTATTCACAAGGACAACTTTGAGAATATCTAT GTCCAAGTTGTTGGCAGGAAACATTTCCTTCTCTTGCCGCCCCTATGCCAACCTTGCATGAATGAGAAGCTCCTC CCTCCCGCCACCTTCACTCGTGAGGGCCAAGGGCTATCTCTGCGCCTCGATGAGCCTTGCGAACCAGTTCCATTC GCAACTTGGGATCCGGACGAGGCTCAAGCTGACGCTACCTCTCTGTCGCACCTCGCGAGGCCACTGCGTGTCACT CTCGAGCCTGGCGACATGCTGTATTTGCCGGCCCTGTGGTAAGTGAACAATGAATTGATTACGGATCAGAGCTTG CTTCATGTCCTGGTCGTTGCCTTCCGTAGCGCCCGCCGTCATCAGATCTGTTGTATTCTTCGCGACGGCGCAGGA GACTTGAAATCGATCTCTTCGGAAGCTGACGCAGCCCATCAAAGGTACCACAAAGTCTCACAATCTTGCCTGGAA GGCGGTGAGGGCTTTAATGTTGCAATTAATTACTGGTCAGTCTTGCGCACCACCAACGTCCAATTTGTTTCTTCC ACTGACCTATCTTTCTCGGACTAGGTACGACATGGAGTTTCGTGGGACGTTGTTTCCGTTATCTGTGTTTCTACG CAGCCTCGGCACAGACCAGGACGCCATGGAGTAG

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