Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3172
Gene name
LocationContig_181:905..1912
Strand-
Gene length (bp)1007
Transcript length (bp)930
Coding sequence length (bp)930
Protein length (aa) 310

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02544 Steroid_dh 3-oxo-5-alpha-steroid 4-dehydrogenase 1.3E-26 159 308

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O94511|YN67_SCHPO Putative enoyl reductase C646.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC646.07c PE=3 SV=1 7 309 9.0E-60
sp|Q55C17|TECR_DICDI Very-long-chain enoyl-CoA reductase OS=Dictyostelium discoideum GN=gpsn2 PE=3 SV=1 33 309 2.0E-56
sp|Q9N5Y2|TECR_CAEEL Probable very-long-chain enoyl-CoA reductase art-1 OS=Caenorhabditis elegans GN=art-1 PE=3 SV=1 37 309 2.0E-48
sp|Q9NZ01|TECR_HUMAN Very-long-chain enoyl-CoA reductase OS=Homo sapiens GN=TECR PE=1 SV=1 29 309 6.0E-45
sp|Q3ZCD7|TECR_BOVIN Very-long-chain enoyl-CoA reductase OS=Bos taurus GN=TECR PE=2 SV=1 29 309 7.0E-45
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Swissprot ID Swissprot Description Start End E-value
sp|O94511|YN67_SCHPO Putative enoyl reductase C646.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC646.07c PE=3 SV=1 7 309 9.0E-60
sp|Q55C17|TECR_DICDI Very-long-chain enoyl-CoA reductase OS=Dictyostelium discoideum GN=gpsn2 PE=3 SV=1 33 309 2.0E-56
sp|Q9N5Y2|TECR_CAEEL Probable very-long-chain enoyl-CoA reductase art-1 OS=Caenorhabditis elegans GN=art-1 PE=3 SV=1 37 309 2.0E-48
sp|Q9NZ01|TECR_HUMAN Very-long-chain enoyl-CoA reductase OS=Homo sapiens GN=TECR PE=1 SV=1 29 309 6.0E-45
sp|Q3ZCD7|TECR_BOVIN Very-long-chain enoyl-CoA reductase OS=Bos taurus GN=TECR PE=2 SV=1 29 309 7.0E-45
sp|Q64232|TECR_RAT Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus GN=Tecr PE=1 SV=1 29 309 5.0E-44
sp|Q9CY27|TECR_MOUSE Very-long-chain enoyl-CoA reductase OS=Mus musculus GN=Tecr PE=1 SV=1 29 309 1.0E-43
sp|Q99190|TECR_YEAST Very-long-chain enoyl-CoA reductase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TSC13 PE=1 SV=1 24 290 2.0E-39
sp|Q9M2U2|TECR_ARATH Very-long-chain enoyl-CoA reductase OS=Arabidopsis thaliana GN=ECR PE=1 SV=1 25 309 2.0E-36
sp|Q8BFZ1|TECRL_MOUSE Trans-2,3-enoyl-CoA reductase-like OS=Mus musculus GN=Tecrl PE=1 SV=1 31 309 1.0E-31
sp|Q5HYJ1|TECRL_HUMAN Trans-2,3-enoyl-CoA reductase-like OS=Homo sapiens GN=TECRL PE=2 SV=1 30 309 4.0E-29
sp|Q3SZ89|TECRL_BOVIN Trans-2,3-enoyl-CoA reductase-like OS=Bos taurus GN=TECRL PE=2 SV=1 30 309 3.0E-26
sp|Q5K2N1|DET2_SOLLC Steroid 5-alpha-reductase DET2 OS=Solanum lycopersicum GN=DET2 PE=1 SV=1 202 308 8.0E-09
sp|Q2QDF6|DET2_GOSHI Steroid 5-alpha-reductase DET2 OS=Gossypium hirsutum GN=DET2 PE=1 SV=1 128 306 6.0E-06
sp|Q9CAH5|POED1_ARATH Polyprenol reductase 1 OS=Arabidopsis thaliana GN=At1g72590 PE=3 SV=1 141 306 9.0E-06
sp|Q9SI62|POED2_ARATH Polyprenol reductase 2 OS=Arabidopsis thaliana GN=At2g16530 PE=1 SV=2 195 306 1.0E-05
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GO

GO Term Description Terminal node
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Yes
GO:0006629 lipid metabolic process Yes
GO:0016491 oxidoreductase activity No
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0003674 molecular_function No
GO:0071704 organic substance metabolic process No
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 68 0.45

Transmembrane Domains

Domain # Start End Length
1 170 187 17
2 202 224 22
3 237 259 22
4 264 283 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3172
MALKTTLKLTNRSPKQPVKRLPPSIDLPPEATVEEAKRVVARAAGIADHNRVGLFDPATKKTLKDRRARLADEAG
VASAGEVLVKDLGPQVAWRTVFVVEYLGPILIHAGAVAARPWLFAGAADAPMSPTQWLSFAMIVGHFVKRELETL
FVHRFSASTMPAFNLVKNSAFYWALSGLLCACSIYGPRSRAAAARLPALDALGAALFLFGEAGNALVHLYLASLR
SAGGTERRIPAGYGFSLVTSPNYMYEILSWLGVILVSRDWAVALFIAIGAAQMYVWACGKERAYRKEFGDKYKKK
RYVILPGLL*
Coding >Hirsu2|3172
ATGGCCCTCAAGACGACCCTCAAGCTGACGAACCGCTCCCCCAAGCAGCCCGTCAAGCGGCTGCCGCCCAGCATC
GACCTGCCGCCCGAGGCGACGGTCGAGGAGGCCAAGCGGGTGGTGGCGCGGGCGGCCGGCATCGCCGACCACAAC
CGCGTCGGCCTCTTCGACCCGGCGACGAAGAAGACGCTCAAGGATCGGCGGGCGCGGCTGGCGGACGAGGCGGGC
GTGGCGTCGGCGGGCGAGGTGCTGGTCAAGGACCTGGGCCCGCAGGTGGCCTGGCGCACCGTCTTCGTCGTCGAG
TACCTGGGCCCGATCCTGATCCACGCGGGCGCGGTGGCGGCGCGGCCGTGGCTGTTCGCGGGCGCGGCCGACGCG
CCCATGTCGCCGACGCAGTGGCTCAGCTTCGCCATGATCGTCGGCCACTTCGTCAAGCGCGAGCTCGAGACGCTC
TTCGTCCACCGCTTCTCCGCCAGCACCATGCCGGCCTTCAACCTCGTCAAGAACAGCGCCTTCTACTGGGCCCTG
TCCGGCCTGCTGTGCGCCTGCTCCATCTACGGCCCGCGCTCGCGCGCCGCCGCCGCCCGCCTGCCCGCCCTCGAC
GCCCTCGGCGCCGCCCTCTTCCTCTTCGGCGAGGCCGGCAACGCCCTCGTCCACCTGTACCTGGCCTCGCTGCGC
TCCGCCGGCGGCACCGAGCGCCGCATCCCGGCCGGCTACGGCTTCTCCCTCGTCACCAGCCCCAACTACATGTAC
GAGATCCTGTCCTGGCTCGGCGTCATCCTCGTCAGCCGCGACTGGGCCGTCGCCCTCTTCATCGCCATCGGCGCC
GCCCAGATGTACGTCTGGGCCTGCGGCAAGGAGCGCGCCTATCGCAAGGAGTTTGGCGACAAGTACAAGAAGAAG
CGCTATGTCATCCTGCCGGGCCTCCTGTGA
Transcript >Hirsu2|3172
ATGGCCCTCAAGACGACCCTCAAGCTGACGAACCGCTCCCCCAAGCAGCCCGTCAAGCGGCTGCCGCCCAGCATC
GACCTGCCGCCCGAGGCGACGGTCGAGGAGGCCAAGCGGGTGGTGGCGCGGGCGGCCGGCATCGCCGACCACAAC
CGCGTCGGCCTCTTCGACCCGGCGACGAAGAAGACGCTCAAGGATCGGCGGGCGCGGCTGGCGGACGAGGCGGGC
GTGGCGTCGGCGGGCGAGGTGCTGGTCAAGGACCTGGGCCCGCAGGTGGCCTGGCGCACCGTCTTCGTCGTCGAG
TACCTGGGCCCGATCCTGATCCACGCGGGCGCGGTGGCGGCGCGGCCGTGGCTGTTCGCGGGCGCGGCCGACGCG
CCCATGTCGCCGACGCAGTGGCTCAGCTTCGCCATGATCGTCGGCCACTTCGTCAAGCGCGAGCTCGAGACGCTC
TTCGTCCACCGCTTCTCCGCCAGCACCATGCCGGCCTTCAACCTCGTCAAGAACAGCGCCTTCTACTGGGCCCTG
TCCGGCCTGCTGTGCGCCTGCTCCATCTACGGCCCGCGCTCGCGCGCCGCCGCCGCCCGCCTGCCCGCCCTCGAC
GCCCTCGGCGCCGCCCTCTTCCTCTTCGGCGAGGCCGGCAACGCCCTCGTCCACCTGTACCTGGCCTCGCTGCGC
TCCGCCGGCGGCACCGAGCGCCGCATCCCGGCCGGCTACGGCTTCTCCCTCGTCACCAGCCCCAACTACATGTAC
GAGATCCTGTCCTGGCTCGGCGTCATCCTCGTCAGCCGCGACTGGGCCGTCGCCCTCTTCATCGCCATCGGCGCC
GCCCAGATGTACGTCTGGGCCTGCGGCAAGGAGCGCGCCTATCGCAAGGAGTTTGGCGACAAGTACAAGAAGAAG
CGCTATGTCATCCTGCCGGGCCTCCTGTGA
Gene >Hirsu2|3172
ATGGCCCTCAAGACGACCCTCAAGCTGACGAACCGCTGTTCGTGACACTCCCCCCCCCTTCCCTTCTCGATGGCG
CAGGAACATGTACTGACGAGGCACAACTCCGGGCTGCAGCCCCCAAGCAGCCCGTCAAGCGGCTGCCGCCCAGCA
TCGACCTGCCGCCCGAGGCGACGGTCGAGGAGGCCAAGCGGGTGGTGGCGCGGGCGGCCGGCATCGCCGACCACA
ACCGCGTCGGCCTCTTCGACCCGGCGACGAAGAAGACGCTCAAGGATCGGCGGGCGCGGCTGGCGGACGAGGCGG
GCGTGGCGTCGGCGGGCGAGGTGCTGGTCAAGGACCTGGGCCCGCAGGTGGCCTGGCGCACCGTCTTCGTCGTCG
AGTACCTGGGCCCGATCCTGATCCACGCGGGCGCGGTGGCGGCGCGGCCGTGGCTGTTCGCGGGCGCGGCCGACG
CGCCCATGTCGCCGACGCAGTGGCTCAGCTTCGCCATGATCGTCGGCCACTTCGTCAAGCGCGAGCTCGAGACGC
TCTTCGTCCACCGCTTCTCCGCCAGCACCATGCCGGCCTTCAACCTCGTCAAGAACAGCGCCTTCTACTGGGCCC
TGTCCGGCCTGCTGTGCGCCTGCTCCATCTACGGCCCGCGCTCGCGCGCCGCCGCCGCCCGCCTGCCCGCCCTCG
ACGCCCTCGGCGCCGCCCTCTTCCTCTTCGGCGAGGCCGGCAACGCCCTCGTCCACCTGTACCTGGCCTCGCTGC
GCTCCGCCGGCGGCACCGAGCGCCGCATCCCGGCCGGCTACGGCTTCTCCCTCGTCACCAGCCCCAACTACATGT
ACGAGATCCTGTCCTGGCTCGGCGTCATCCTCGTCAGCCGCGACTGGGCCGTCGCCCTCTTCATCGCCATCGGCG
CCGCCCAGATGTACGTCTGGGCCTGCGGCAAGGAGCGCGCCTATCGCAAGGAGTTTGGCGACAAGTACAAGAAGA
AGCGCTATGTCATCCTGCCGGGCCTCCTGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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