© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3157 |
| Gene name | |
| Location | Contig_1802:551..1795 |
| Strand | - |
| Gene length (bp) | 1244 |
| Transcript length (bp) | 969 |
| Coding sequence length (bp) | 969 |
| Protein length (aa) | 323 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10445 | DUF2456 | Protein of unknown function (DUF2456) | 8.4E-20 | 185 | 252 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74505|YJD2_SCHPO | Uncharacterized protein C594.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC594.02c PE=1 SV=1 | 68 | 258 | 3.0E-28 |
| sp|P38740|YHC6_YEAST | Uncharacterized protein YHL026C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHL026C PE=1 SV=2 | 65 | 256 | 2.0E-15 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 68 | 90 | 22 |
| 2 | 110 | 132 | 22 |
| 3 | 193 | 215 | 22 |
| 4 | 235 | 257 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3157 MGRRDWPARLAFWKRAGAGRDKEEAAAETPPRDEEAQTAGDGDDDDDDDDKVMEPSSRLTGHQAFYMFVLDGIGG MCLSGGINFAIAYGMYRTQDLRRHPIRLFQLPNTLAGDAAITIVVQCLITWLIELGLAGHDVKHGGVQPIGWLRE PRNCLARWFFWLPRDEAEAGTARLPAVRVFRFWPLFGQVLRGALFGCVAFFPFWPVAVGIMTAAGHHHDGDWYYQ HRWAPQVYKLILGGVLGLVTTPLMAMFWLVRAGWDVKRRDAAADAAAAASSSSPSSXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXPPPTTPTEP* |
| Coding | >Hirsu2|3157 ATGGGACGGCGCGACTGGCCGGCTCGCTTGGCCTTCTGGAAGAGGGCCGGGGCCGGCAGGGACAAGGAGGAGGCG GCGGCCGAGACGCCGCCGCGCGACGAGGAGGCCCAGACGGCGGGCGATGGCGACGACGACGACGACGACGACGAC AAGGTCATGGAGCCCAGCTCGCGGCTGACGGGCCACCAGGCCTTCTACATGTTCGTCCTTGACGGCATCGGAGGC ATGTGCCTCTCGGGCGGCATCAACTTTGCCATTGCCTACGGCATGTACCGGACGCAGGACCTACGGCGGCACCCG ATCCGGCTGTTCCAGCTGCCCAACACGCTGGCGGGCGACGCGGCCATCACGATCGTGGTGCAGTGCCTCATCACC TGGCTGATCGAGCTCGGGCTGGCCGGGCACGACGTCAAGCACGGCGGCGTGCAGCCCATCGGCTGGCTGCGCGAG CCGCGCAACTGCCTGGCCCGCTGGTTCTTCTGGCTGCCGCGGGACGAGGCCGAGGCCGGGACGGCGCGGCTGCCG GCCGTCCGCGTCTTCCGCTTCTGGCCGCTGTTCGGCCAGGTCCTGCGCGGCGCCCTCTTCGGCTGCGTCGCCTTC TTCCCCTTCTGGCCCGTCGCCGTCGGCATCATGACGGCCGCCGGCCACCACCACGACGGCGACTGGTACTACCAG CACCGCTGGGCGCCGCAGGTCTACAAGCTCATCCTCGGCGGCGTGCTGGGCCTGGTGACGACGCCGCTCATGGCC ATGTTCTGGCTTGTCCGTGCCGGCTGGGACGTGAAGCGCCGGGATGCCGCCGCCGATGCTGCTGCTGCCGCCTCG TCGTCGTCGCCGTCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGCCGCCGACGACGCCGACCGAGCCGTGA |
| Transcript | >Hirsu2|3157 ATGGGACGGCGCGACTGGCCGGCTCGCTTGGCCTTCTGGAAGAGGGCCGGGGCCGGCAGGGACAAGGAGGAGGCG GCGGCCGAGACGCCGCCGCGCGACGAGGAGGCCCAGACGGCGGGCGATGGCGACGACGACGACGACGACGACGAC AAGGTCATGGAGCCCAGCTCGCGGCTGACGGGCCACCAGGCCTTCTACATGTTCGTCCTTGACGGCATCGGAGGC ATGTGCCTCTCGGGCGGCATCAACTTTGCCATTGCCTACGGCATGTACCGGACGCAGGACCTACGGCGGCACCCG ATCCGGCTGTTCCAGCTGCCCAACACGCTGGCGGGCGACGCGGCCATCACGATCGTGGTGCAGTGCCTCATCACC TGGCTGATCGAGCTCGGGCTGGCCGGGCACGACGTCAAGCACGGCGGCGTGCAGCCCATCGGCTGGCTGCGCGAG CCGCGCAACTGCCTGGCCCGCTGGTTCTTCTGGCTGCCGCGGGACGAGGCCGAGGCCGGGACGGCGCGGCTGCCG GCCGTCCGCGTCTTCCGCTTCTGGCCGCTGTTCGGCCAGGTCCTGCGCGGCGCCCTCTTCGGCTGCGTCGCCTTC TTCCCCTTCTGGCCCGTCGCCGTCGGCATCATGACGGCCGCCGGCCACCACCACGACGGCGACTGGTACTACCAG CACCGCTGGGCGCCGCAGGTCTACAAGCTCATCCTCGGCGGCGTGCTGGGCCTGGTGACGACGCCGCTCATGGCC ATGTTCTGGCTTGTCCGTGCCGGCTGGGACGTGAAGCGCCGGGATGCCGCCGCCGATGCTGCTGCTGCCGCCTCG TCGTCGTCGCCGTCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGCCGCCGACGACGCCGACCGAGCCGTGA |
| Gene | >Hirsu2|3157 ATGGGACGGCGCGACTGGCCGGCTCGCTTGGCCTTCTGGAAGAGGGCCGGGGCCGGCAGGGACAAGGAGGAGGCG GCGGCCGAGACGCCGCCGCGCGACGAGGAGGCCCAGACGGCGGGCGATGGCGACGACGACGACGACGACGACGAC AAGGTCATGGAGCCCAGCTCGCGGCTGACGGGCCACCAGGCCTTCTACATGTTCGTCCTTGACGGCATCGGAGGC ATGTGCCTCTCGGGCGGCATCAACTTTGCCATTGCCTACGGTACGCACCGCCAGATCCATCATCTCCTCCCCCTC CATCACGAGCTCTCCAGCCCTCCCCCCTGAACCCTGGTCGCCCAGTCCGCCGTCATCCCGTCCCTCCATCCNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCTTCCTCTCCGGGGCGGAAACCGGAGGAGCCCGGCTGA CGACGAACCTCGCAGGCATGTACCGGACGCAGGACCTACGGCGGCACCCGATCCGGCTGTTCCAGCTGCCCAACA CGCTGGCGGGCGACGCGGCCATCACGATCGTGGTGCAGTGCCTCATCACCTGGCTGATCGAGCTCGGGCTGGCCG GGCACGACGTCAAGCACGGCGGCGTGCAGCCCATCGGCTGGCTGCGCGAGCCGCGCAACTGCCTGGCCCGCTGGT TCTTCTGGCTGCCGCGGGACGAGGCCGAGGCCGGGACGGCGCGGCTGCCGGCCGTCCGCGTCTTCCGCTTCTGGC CGCTGTTCGGCCAGGTCCTGCGCGGCGCCCTCTTCGGCTGCGTCGCCTTCTTCCCCTTCTGGCCCGTCGCCGTCG GCATCATGACGGCCGCCGGCCACCACCACGACGGCGACTGGTACTACCAGCACCGCTGGGCGCCGCAGGTCTACA AGCTCATCCTCGGCGGCGTGCTGGGCCTGGTGACGACGCCGCTCATGGCCATGTTCTGGCTTGTCCGTGCCGGCT GGGACGTGAAGCGCCGGGATGCCGCCGCCGATGCTGCTGCTGCCGCCTCGTCGTCGTCGCCGTCGTCNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNGCCGCCGCCGACGACGCCGACCGAGCCGTGA |