Protein ID | Hirsu2|3157 |
Gene name | |
Location | Contig_1802:551..1795 |
Strand | - |
Gene length (bp) | 1244 |
Transcript length (bp) | 969 |
Coding sequence length (bp) | 969 |
Protein length (aa) | 323 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10445 | DUF2456 | Protein of unknown function (DUF2456) | 8.4E-20 | 185 | 252 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O74505|YJD2_SCHPO | Uncharacterized protein C594.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC594.02c PE=1 SV=1 | 68 | 258 | 3.0E-28 |
sp|P38740|YHC6_YEAST | Uncharacterized protein YHL026C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHL026C PE=1 SV=2 | 65 | 256 | 2.0E-15 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 68 | 90 | 22 |
2 | 110 | 132 | 22 |
3 | 193 | 215 | 22 |
4 | 235 | 257 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3157 MGRRDWPARLAFWKRAGAGRDKEEAAAETPPRDEEAQTAGDGDDDDDDDDKVMEPSSRLTGHQAFYMFVLDGIGG MCLSGGINFAIAYGMYRTQDLRRHPIRLFQLPNTLAGDAAITIVVQCLITWLIELGLAGHDVKHGGVQPIGWLRE PRNCLARWFFWLPRDEAEAGTARLPAVRVFRFWPLFGQVLRGALFGCVAFFPFWPVAVGIMTAAGHHHDGDWYYQ HRWAPQVYKLILGGVLGLVTTPLMAMFWLVRAGWDVKRRDAAADAAAAASSSSPSSXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXPPPTTPTEP* |
Coding | >Hirsu2|3157 ATGGGACGGCGCGACTGGCCGGCTCGCTTGGCCTTCTGGAAGAGGGCCGGGGCCGGCAGGGACAAGGAGGAGGCG GCGGCCGAGACGCCGCCGCGCGACGAGGAGGCCCAGACGGCGGGCGATGGCGACGACGACGACGACGACGACGAC AAGGTCATGGAGCCCAGCTCGCGGCTGACGGGCCACCAGGCCTTCTACATGTTCGTCCTTGACGGCATCGGAGGC ATGTGCCTCTCGGGCGGCATCAACTTTGCCATTGCCTACGGCATGTACCGGACGCAGGACCTACGGCGGCACCCG ATCCGGCTGTTCCAGCTGCCCAACACGCTGGCGGGCGACGCGGCCATCACGATCGTGGTGCAGTGCCTCATCACC TGGCTGATCGAGCTCGGGCTGGCCGGGCACGACGTCAAGCACGGCGGCGTGCAGCCCATCGGCTGGCTGCGCGAG CCGCGCAACTGCCTGGCCCGCTGGTTCTTCTGGCTGCCGCGGGACGAGGCCGAGGCCGGGACGGCGCGGCTGCCG GCCGTCCGCGTCTTCCGCTTCTGGCCGCTGTTCGGCCAGGTCCTGCGCGGCGCCCTCTTCGGCTGCGTCGCCTTC TTCCCCTTCTGGCCCGTCGCCGTCGGCATCATGACGGCCGCCGGCCACCACCACGACGGCGACTGGTACTACCAG CACCGCTGGGCGCCGCAGGTCTACAAGCTCATCCTCGGCGGCGTGCTGGGCCTGGTGACGACGCCGCTCATGGCC ATGTTCTGGCTTGTCCGTGCCGGCTGGGACGTGAAGCGCCGGGATGCCGCCGCCGATGCTGCTGCTGCCGCCTCG TCGTCGTCGCCGTCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGCCGCCGACGACGCCGACCGAGCCGTGA |
Transcript | >Hirsu2|3157 ATGGGACGGCGCGACTGGCCGGCTCGCTTGGCCTTCTGGAAGAGGGCCGGGGCCGGCAGGGACAAGGAGGAGGCG GCGGCCGAGACGCCGCCGCGCGACGAGGAGGCCCAGACGGCGGGCGATGGCGACGACGACGACGACGACGACGAC AAGGTCATGGAGCCCAGCTCGCGGCTGACGGGCCACCAGGCCTTCTACATGTTCGTCCTTGACGGCATCGGAGGC ATGTGCCTCTCGGGCGGCATCAACTTTGCCATTGCCTACGGCATGTACCGGACGCAGGACCTACGGCGGCACCCG ATCCGGCTGTTCCAGCTGCCCAACACGCTGGCGGGCGACGCGGCCATCACGATCGTGGTGCAGTGCCTCATCACC TGGCTGATCGAGCTCGGGCTGGCCGGGCACGACGTCAAGCACGGCGGCGTGCAGCCCATCGGCTGGCTGCGCGAG CCGCGCAACTGCCTGGCCCGCTGGTTCTTCTGGCTGCCGCGGGACGAGGCCGAGGCCGGGACGGCGCGGCTGCCG GCCGTCCGCGTCTTCCGCTTCTGGCCGCTGTTCGGCCAGGTCCTGCGCGGCGCCCTCTTCGGCTGCGTCGCCTTC TTCCCCTTCTGGCCCGTCGCCGTCGGCATCATGACGGCCGCCGGCCACCACCACGACGGCGACTGGTACTACCAG CACCGCTGGGCGCCGCAGGTCTACAAGCTCATCCTCGGCGGCGTGCTGGGCCTGGTGACGACGCCGCTCATGGCC ATGTTCTGGCTTGTCCGTGCCGGCTGGGACGTGAAGCGCCGGGATGCCGCCGCCGATGCTGCTGCTGCCGCCTCG TCGTCGTCGCCGTCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGCCGCCGACGACGCCGACCGAGCCGTGA |
Gene | >Hirsu2|3157 ATGGGACGGCGCGACTGGCCGGCTCGCTTGGCCTTCTGGAAGAGGGCCGGGGCCGGCAGGGACAAGGAGGAGGCG GCGGCCGAGACGCCGCCGCGCGACGAGGAGGCCCAGACGGCGGGCGATGGCGACGACGACGACGACGACGACGAC AAGGTCATGGAGCCCAGCTCGCGGCTGACGGGCCACCAGGCCTTCTACATGTTCGTCCTTGACGGCATCGGAGGC ATGTGCCTCTCGGGCGGCATCAACTTTGCCATTGCCTACGGTACGCACCGCCAGATCCATCATCTCCTCCCCCTC CATCACGAGCTCTCCAGCCCTCCCCCCTGAACCCTGGTCGCCCAGTCCGCCGTCATCCCGTCCCTCCATCCNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCTTCCTCTCCGGGGCGGAAACCGGAGGAGCCCGGCTGA CGACGAACCTCGCAGGCATGTACCGGACGCAGGACCTACGGCGGCACCCGATCCGGCTGTTCCAGCTGCCCAACA CGCTGGCGGGCGACGCGGCCATCACGATCGTGGTGCAGTGCCTCATCACCTGGCTGATCGAGCTCGGGCTGGCCG GGCACGACGTCAAGCACGGCGGCGTGCAGCCCATCGGCTGGCTGCGCGAGCCGCGCAACTGCCTGGCCCGCTGGT TCTTCTGGCTGCCGCGGGACGAGGCCGAGGCCGGGACGGCGCGGCTGCCGGCCGTCCGCGTCTTCCGCTTCTGGC CGCTGTTCGGCCAGGTCCTGCGCGGCGCCCTCTTCGGCTGCGTCGCCTTCTTCCCCTTCTGGCCCGTCGCCGTCG GCATCATGACGGCCGCCGGCCACCACCACGACGGCGACTGGTACTACCAGCACCGCTGGGCGCCGCAGGTCTACA AGCTCATCCTCGGCGGCGTGCTGGGCCTGGTGACGACGCCGCTCATGGCCATGTTCTGGCTTGTCCGTGCCGGCT GGGACGTGAAGCGCCGGGATGCCGCCGCCGATGCTGCTGCTGCCGCCTCGTCGTCGTCGCCGTCGTCNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNGCCGCCGCCGACGACGCCGACCGAGCCGTGA |