Protein ID | Hirsu2|3136 |
Gene name | |
Location | Contig_18:53196..54852 |
Strand | - |
Gene length (bp) | 1656 |
Transcript length (bp) | 1656 |
Coding sequence length (bp) | 1656 |
Protein length (aa) | 552 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02434 | Fringe | Fringe-like | 9.7E-07 | 263 | 353 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016020 | membrane | Yes |
GO:0016757 | glycosyltransferase activity | Yes |
GO:0016740 | transferase activity | No |
GO:0003824 | catalytic activity | No |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
GO:0110165 | cellular anatomical entity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 42 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 37 | 17 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3136 MMGVKLSGPKRAITMRSPFSRALVAALCVLLVLMAVMRTDPAPVRNHLFGKAAVKSALTQQQRPLNDAMSSHAQA PVTAADLAPQGGHALNCSVDVSHLTDLKQRYNLDDKFQYMKRYVRFTRSQGLERKSMTKLPQKLLPGALKTVDLA KQYDPEICAEPLDVSVPASGLPSTVNASDFMFGVSTTYQRFMDAATTPINEWIFWLTDSRGHSNGGKLLLMLLDA SDEELQEVANLLGDVGIDVDVYHSDSSVEMAVRYLTLVPTLYTHADSHKKKWLVTCDDDTFFPSMHALINKINSL DHTREMYVGTLSEDVGAIERHGSQAFGGAGVFLSLPMAEKITEKYGSCTSEQKVLESNSGWGPQGDILLRKCIYE NTETRLTTVWDLWQLDFFGEPAGFYEWGIKPLSLHHYRGGGWHKAKPGQFTKIAQTCGEDCILQRFQTADDFVIS GYSIAHYPQGIKFDMNQMEATLWAAPENKGWNLDFMFGPQRPSLEKTGRKIAWELQESEVRSDGSVLQTYTRKKD DARWVHKNGQPMSNIDGVFELVWISS* |
Coding | >Hirsu2|3136 ATGATGGGTGTCAAATTGTCGGGGCCCAAACGAGCCATCACCATGCGGAGTCCGTTTTCGAGGGCCCTTGTCGCC GCCCTCTGCGTCCTGCTCGTCCTCATGGCCGTCATGCGAACCGACCCGGCCCCTGTTCGCAACCACCTGTTCGGA AAGGCTGCCGTCAAGTCGGCCCTCACTCAACAGCAGCGCCCTCTCAACGACGCCATGTCGTCCCACGCCCAAGCC CCCGTCACCGCTGCCGACCTCGCGCCCCAAGGCGGCCACGCCTTGAACTGCAGTGTCGACGTGTCTCATCTGACC GACCTCAAACAGCGCTACAACCTCGACGACAAGTTCCAGTACATGAAGCGTTACGTTCGCTTCACTCGCAGCCAG GGCCTCGAGCGCAAGAGCATGACCAAGCTGCCGCAGAAGTTACTGCCCGGCGCCCTCAAGACCGTCGACCTCGCC AAGCAGTATGACCCCGAGATCTGCGCCGAGCCCCTCGACGTCTCCGTCCCCGCCTCCGGCCTGCCCTCGACCGTC AATGCCTCCGACTTCATGTTCGGCGTTTCGACGACGTACCAGCGCTTCATGGACGCCGCCACCACGCCCATCAAC GAGTGGATCTTCTGGCTCACCGACAGCCGCGGCCACTCCAACGGCGGCAAGCTACTGCTTATGCTCCTTGACGCC AGCGACGAAGAACTCCAGGAGGTGGCCAACTTGCTTGGCGATGTCGGCATCGACGTCGACGTCTACCACTCCGAC TCGTCCGTCGAGATGGCCGTGCGCTACCTGACGCTGGTGCCTACTCTGTACACTCACGCCGACTCGCATAAAAAG AAGTGGCTCGTCACCTGCGACGACGACACCTTCTTCCCCAGCATGCACGCCCTTATCAACAAGATCAACAGCCTC GACCACACCCGGGAGATGTATGTCGGCACCCTCTCCGAGGACGTCGGCGCAATCGAGCGCCACGGCTCCCAGGCC TTTGGTGGCGCCGGCGTCTTCCTCTCTCTGCCCATGGCCGAGAAGATTACGGAAAAGTACGGCAGCTGCACTTCG GAACAGAAGGTGCTCGAGTCAAATTCCGGATGGGGCCCCCAGGGCGATATACTTCTTCGCAAGTGTATCTACGAG AATACGGAAACGCGACTGACGACTGTCTGGGATCTATGGCAGCTCGACTTCTTCGGCGAGCCCGCTGGATTTTAC GAGTGGGGTATCAAGCCGCTCTCGTTGCACCACTACCGAGGCGGCGGCTGGCACAAGGCCAAGCCTGGCCAGTTC ACCAAGATTGCCCAGACGTGCGGCGAGGACTGCATTCTGCAGAGGTTCCAGACGGCAGACGACTTTGTCATCTCG GGATACTCCATCGCCCACTATCCTCAGGGCATCAAGTTTGACATGAACCAAATGGAGGCGACTCTGTGGGCCGCG CCGGAAAACAAGGGCTGGAACCTCGATTTCATGTTTGGCCCTCAGCGGCCTTCGCTCGAGAAGACGGGCCGCAAG ATTGCTTGGGAGCTGCAAGAATCCGAAGTCCGCTCGGACGGCTCCGTCTTGCAGACGTACACGCGAAAGAAGGAC GACGCTCGTTGGGTGCACAAGAACGGCCAACCGATGAGCAACATTGACGGTGTCTTCGAGTTGGTTTGGATTTCC TCATAA |
Transcript | >Hirsu2|3136 ATGATGGGTGTCAAATTGTCGGGGCCCAAACGAGCCATCACCATGCGGAGTCCGTTTTCGAGGGCCCTTGTCGCC GCCCTCTGCGTCCTGCTCGTCCTCATGGCCGTCATGCGAACCGACCCGGCCCCTGTTCGCAACCACCTGTTCGGA AAGGCTGCCGTCAAGTCGGCCCTCACTCAACAGCAGCGCCCTCTCAACGACGCCATGTCGTCCCACGCCCAAGCC CCCGTCACCGCTGCCGACCTCGCGCCCCAAGGCGGCCACGCCTTGAACTGCAGTGTCGACGTGTCTCATCTGACC GACCTCAAACAGCGCTACAACCTCGACGACAAGTTCCAGTACATGAAGCGTTACGTTCGCTTCACTCGCAGCCAG GGCCTCGAGCGCAAGAGCATGACCAAGCTGCCGCAGAAGTTACTGCCCGGCGCCCTCAAGACCGTCGACCTCGCC AAGCAGTATGACCCCGAGATCTGCGCCGAGCCCCTCGACGTCTCCGTCCCCGCCTCCGGCCTGCCCTCGACCGTC AATGCCTCCGACTTCATGTTCGGCGTTTCGACGACGTACCAGCGCTTCATGGACGCCGCCACCACGCCCATCAAC GAGTGGATCTTCTGGCTCACCGACAGCCGCGGCCACTCCAACGGCGGCAAGCTACTGCTTATGCTCCTTGACGCC AGCGACGAAGAACTCCAGGAGGTGGCCAACTTGCTTGGCGATGTCGGCATCGACGTCGACGTCTACCACTCCGAC TCGTCCGTCGAGATGGCCGTGCGCTACCTGACGCTGGTGCCTACTCTGTACACTCACGCCGACTCGCATAAAAAG AAGTGGCTCGTCACCTGCGACGACGACACCTTCTTCCCCAGCATGCACGCCCTTATCAACAAGATCAACAGCCTC GACCACACCCGGGAGATGTATGTCGGCACCCTCTCCGAGGACGTCGGCGCAATCGAGCGCCACGGCTCCCAGGCC TTTGGTGGCGCCGGCGTCTTCCTCTCTCTGCCCATGGCCGAGAAGATTACGGAAAAGTACGGCAGCTGCACTTCG GAACAGAAGGTGCTCGAGTCAAATTCCGGATGGGGCCCCCAGGGCGATATACTTCTTCGCAAGTGTATCTACGAG AATACGGAAACGCGACTGACGACTGTCTGGGATCTATGGCAGCTCGACTTCTTCGGCGAGCCCGCTGGATTTTAC GAGTGGGGTATCAAGCCGCTCTCGTTGCACCACTACCGAGGCGGCGGCTGGCACAAGGCCAAGCCTGGCCAGTTC ACCAAGATTGCCCAGACGTGCGGCGAGGACTGCATTCTGCAGAGGTTCCAGACGGCAGACGACTTTGTCATCTCG GGATACTCCATCGCCCACTATCCTCAGGGCATCAAGTTTGACATGAACCAAATGGAGGCGACTCTGTGGGCCGCG CCGGAAAACAAGGGCTGGAACCTCGATTTCATGTTTGGCCCTCAGCGGCCTTCGCTCGAGAAGACGGGCCGCAAG ATTGCTTGGGAGCTGCAAGAATCCGAAGTCCGCTCGGACGGCTCCGTCTTGCAGACGTACACGCGAAAGAAGGAC GACGCTCGTTGGGTGCACAAGAACGGCCAACCGATGAGCAACATTGACGGTGTCTTCGAGTTGGTTTGGATTTCC TCATAA |
Gene | >Hirsu2|3136 ATGATGGGTGTCAAATTGTCGGGGCCCAAACGAGCCATCACCATGCGGAGTCCGTTTTCGAGGGCCCTTGTCGCC GCCCTCTGCGTCCTGCTCGTCCTCATGGCCGTCATGCGAACCGACCCGGCCCCTGTTCGCAACCACCTGTTCGGA AAGGCTGCCGTCAAGTCGGCCCTCACTCAACAGCAGCGCCCTCTCAACGACGCCATGTCGTCCCACGCCCAAGCC CCCGTCACCGCTGCCGACCTCGCGCCCCAAGGCGGCCACGCCTTGAACTGCAGTGTCGACGTGTCTCATCTGACC GACCTCAAACAGCGCTACAACCTCGACGACAAGTTCCAGTACATGAAGCGTTACGTTCGCTTCACTCGCAGCCAG GGCCTCGAGCGCAAGAGCATGACCAAGCTGCCGCAGAAGTTACTGCCCGGCGCCCTCAAGACCGTCGACCTCGCC AAGCAGTATGACCCCGAGATCTGCGCCGAGCCCCTCGACGTCTCCGTCCCCGCCTCCGGCCTGCCCTCGACCGTC AATGCCTCCGACTTCATGTTCGGCGTTTCGACGACGTACCAGCGCTTCATGGACGCCGCCACCACGCCCATCAAC GAGTGGATCTTCTGGCTCACCGACAGCCGCGGCCACTCCAACGGCGGCAAGCTACTGCTTATGCTCCTTGACGCC AGCGACGAAGAACTCCAGGAGGTGGCCAACTTGCTTGGCGATGTCGGCATCGACGTCGACGTCTACCACTCCGAC TCGTCCGTCGAGATGGCCGTGCGCTACCTGACGCTGGTGCCTACTCTGTACACTCACGCCGACTCGCATAAAAAG AAGTGGCTCGTCACCTGCGACGACGACACCTTCTTCCCCAGCATGCACGCCCTTATCAACAAGATCAACAGCCTC GACCACACCCGGGAGATGTATGTCGGCACCCTCTCCGAGGACGTCGGCGCAATCGAGCGCCACGGCTCCCAGGCC TTTGGTGGCGCCGGCGTCTTCCTCTCTCTGCCCATGGCCGAGAAGATTACGGAAAAGTACGGCAGCTGCACTTCG GAACAGAAGGTGCTCGAGTCAAATTCCGGATGGGGCCCCCAGGGCGATATACTTCTTCGCAAGTGTATCTACGAG AATACGGAAACGCGACTGACGACTGTCTGGGATCTATGGCAGCTCGACTTCTTCGGCGAGCCCGCTGGATTTTAC GAGTGGGGTATCAAGCCGCTCTCGTTGCACCACTACCGAGGCGGCGGCTGGCACAAGGCCAAGCCTGGCCAGTTC ACCAAGATTGCCCAGACGTGCGGCGAGGACTGCATTCTGCAGAGGTTCCAGACGGCAGACGACTTTGTCATCTCG GGATACTCCATCGCCCACTATCCTCAGGGCATCAAGTTTGACATGAACCAAATGGAGGCGACTCTGTGGGCCGCG CCGGAAAACAAGGGCTGGAACCTCGATTTCATGTTTGGCCCTCAGCGGCCTTCGCTCGAGAAGACGGGCCGCAAG ATTGCTTGGGAGCTGCAAGAATCCGAAGTCCGCTCGGACGGCTCCGTCTTGCAGACGTACACGCGAAAGAAGGAC GACGCTCGTTGGGTGCACAAGAACGGCCAACCGATGAGCAACATTGACGGTGTCTTCGAGTTGGTTTGGATTTCC TCATAA |