Protein ID | Hirsu2|3128 |
Gene name | |
Location | Contig_18:29986..31885 |
Strand | + |
Gene length (bp) | 1899 |
Transcript length (bp) | 1767 |
Coding sequence length (bp) | 1767 |
Protein length (aa) | 589 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01565 | FAD_binding_4 | FAD binding domain | 1.6E-20 | 127 | 265 |
PF08031 | BBE | Berberine and berberine like | 4.6E-11 | 524 | 572 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|D4AS41|A7056_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 | 23 | 588 | 5.0E-65 |
sp|D4B1Z7|A2478_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 | 28 | 575 | 6.0E-53 |
sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 132 | 566 | 1.0E-13 |
sp|Q9FZC8|FOX5_ARATH | Flavin-dependent oxidoreductase FOX5 OS=Arabidopsis thaliana GN=FOX5 PE=3 SV=1 | 68 | 290 | 1.0E-08 |
sp|Q9FZC6|FOX3_ARATH | Flavin-dependent oxidoreductase FOX3 OS=Arabidopsis thaliana GN=FOX3 PE=3 SV=1 | 127 | 290 | 3.0E-08 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|D4AS41|A7056_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 | 23 | 588 | 5.0E-65 |
sp|D4B1Z7|A2478_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 | 28 | 575 | 6.0E-53 |
sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 132 | 566 | 1.0E-13 |
sp|Q9FZC8|FOX5_ARATH | Flavin-dependent oxidoreductase FOX5 OS=Arabidopsis thaliana GN=FOX5 PE=3 SV=1 | 68 | 290 | 1.0E-08 |
sp|Q9FZC6|FOX3_ARATH | Flavin-dependent oxidoreductase FOX3 OS=Arabidopsis thaliana GN=FOX3 PE=3 SV=1 | 127 | 290 | 3.0E-08 |
sp|A6P6V9|CBDAS_CANSA | Cannabidiolic acid synthase OS=Cannabis sativa GN=CBDAS PE=1 SV=1 | 130 | 306 | 2.0E-07 |
sp|Q9FZC7|FOX4_ARATH | Flavin-dependent oxidoreductase FOX4 OS=Arabidopsis thaliana GN=FOX4 PE=2 SV=1 | 127 | 290 | 3.0E-07 |
sp|Q9FZC4|FOX1_ARATH | Flavin-dependent oxidoreductase FOX1 OS=Arabidopsis thaliana GN=FOX1 PE=2 SV=1 | 98 | 290 | 5.0E-07 |
sp|O06997|YVDP_BACSU | Uncharacterized FAD-linked oxidoreductase YvdP OS=Bacillus subtilis (strain 168) GN=yvdP PE=1 SV=1 | 138 | 566 | 5.0E-06 |
sp|Q33DQ2|THCAI_CANSA | Inactive tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=3 SV=1 | 130 | 295 | 8.0E-06 |
sp|Q9FZC5|FOX2_ARATH | Flavin-dependent oxidoreductase FOX2 OS=Arabidopsis thaliana GN=FOX2 PE=2 SV=1 | 127 | 290 | 9.0E-06 |
sp|A6P6W1|CASL2_CANSA | Cannabidiolic acid synthase-like 2 OS=Cannabis sativa GN=CBDAS3 PE=2 SV=1 | 132 | 309 | 9.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016491 | oxidoreductase activity | Yes |
GO:0050660 | flavin adenine dinucleotide binding | Yes |
GO:0036094 | small molecule binding | No |
GO:0043168 | anion binding | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0000166 | nucleotide binding | No |
GO:0003824 | catalytic activity | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0005488 | binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0043167 | ion binding | No |
GO:0003674 | molecular_function | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.2752 | 0.0654 | 0.6811 | 0.1223 | 0.1378 | 0.0814 | 0.1266 | 0.4234 | 0.068 | 0.0972 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 21 | 0.999738 |
CAZyme category | E-value | Start | End |
---|---|---|---|
AA7 | 3.7E-51 | 129 | 571 |
Orthofinder run ID | 4 |
Orthogroup | 66 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3128 MRPLEFAVPLLLLLLPCVAQSACKPVPGDSNWPPRRVWKQLNQTVGGRLMATVPLGSVCHPGGYGPRRPEPINET ACGILRDQWPFPPVFSASPADVMNAYFQNASCSPFYDTNGRCRLGNLASYSIAVSEAQHVIAGVQFARDNNVRLA IKNTGHDFMGKSTGKGSLSLWMHNLNRREIIHNYTSSAYSGAALRMGAGTTGDQALSFATAAGYVLVTGDCPTVG VAVGYASGGGHGLLNNVHGMGADNVLEWEVVTADGRHLTASPDQNADLYWALTGGGAGTFAVVLSVTYRLHPDVS VGAATLSFSRDFAPSKQAYENAVQAWWLFLPTVVDAGAAPAFNLMPDQFLVHNTTGPNMTAAAMNALYAPYLAQL DQLGVSYDFATYTSPNFLEHFNATNGPLPDGPYTASPLFNSRIIPLTVSQDASRARNLTLAMMAVMDYDPSGANW QFGCQGVNVGDKNKRFTHPDNALAAYWRNAIAICLEYSLYDWDLPQSEMLRRKQDLANIIHPPIVAATIDSGSYL NEADPLVYPMDQPSKWKDAFYGANYNRLRSVKDKWDPQSVFYARTSVGSEDWTQDSEGRLCKA* |
Coding | >Hirsu2|3128 ATGCGGCCTCTCGAGTTCGCTGTGCCGCTGCTATTACTGCTGCTACCATGCGTCGCCCAGTCCGCCTGCAAGCCC GTCCCGGGCGACAGCAACTGGCCGCCCCGGCGGGTCTGGAAGCAGCTCAATCAGACGGTTGGCGGCCGCCTGATG GCCACTGTTCCCTTGGGCTCCGTCTGCCATCCGGGAGGATACGGGCCCAGGCGGCCCGAGCCGATCAACGAGACC GCATGTGGTATTCTGAGGGACCAATGGCCCTTTCCACCTGTCTTCTCGGCATCTCCGGCCGACGTCATGAACGCC TACTTCCAGAACGCGTCCTGCAGCCCCTTCTACGATACCAACGGCCGCTGCCGGCTCGGCAACCTCGCCAGCTAC TCCATCGCCGTCTCGGAGGCCCAGCATGTCATCGCCGGCGTCCAGTTTGCTCGGGACAACAACGTCCGGCTGGCG ATCAAGAACACGGGCCATGACTTTATGGGCAAGTCGACCGGCAAGGGAAGCCTCTCTCTCTGGATGCACAACCTG AACAGGAGGGAGATAATCCACAACTACACCAGCTCGGCCTACAGCGGAGCAGCCCTGCGTATGGGCGCCGGCACC ACGGGTGACCAGGCGCTTAGCTTTGCGACAGCTGCTGGCTACGTCCTCGTGACCGGTGACTGTCCGACCGTTGGT GTGGCTGTCGGTTATGCCTCGGGCGGCGGCCATGGCCTGCTCAACAACGTGCACGGCATGGGGGCCGACAACGTA CTCGAGTGGGAGGTCGTCACGGCCGACGGCCGCCACCTTACGGCCAGCCCGGACCAGAACGCCGATCTTTACTGG GCCCTCACCGGCGGCGGCGCCGGCACGTTCGCCGTTGTCCTCTCCGTCACCTACCGGCTGCATCCCGACGTCAGC GTCGGAGCCGCCACGCTCAGTTTCAGCAGGGACTTTGCCCCGAGCAAGCAGGCATACGAGAACGCCGTCCAGGCT TGGTGGCTCTTCCTGCCGACCGTCGTCGATGCCGGCGCTGCCCCAGCCTTCAACCTCATGCCCGACCAGTTTCTC GTTCACAACACGACCGGTCCCAACATGACGGCTGCCGCCATGAACGCTCTGTATGCGCCCTATCTGGCCCAGCTC GACCAGCTGGGCGTCTCGTATGACTTCGCCACGTACACGTCGCCCAACTTCTTGGAGCATTTCAACGCCACCAAC GGCCCCCTACCCGACGGCCCATACACGGCCTCCCCCCTCTTCAACAGTAGAATCATACCGCTCACCGTCTCCCAA GATGCCTCCAGGGCCCGGAACCTGACGCTCGCCATGATGGCTGTCATGGATTACGATCCATCCGGAGCCAACTGG CAGTTCGGGTGTCAGGGTGTGAATGTTGGCGATAAGAACAAGCGCTTCACGCATCCCGATAATGCCCTTGCCGCC TATTGGCGCAACGCCATCGCCATCTGCCTTGAATATTCACTTTACGACTGGGATCTACCCCAGTCGGAGATGCTC CGCCGCAAGCAAGACCTGGCCAACATCATCCATCCACCCATTGTGGCCGCCACGATCGACTCGGGCTCATACCTA AACGAGGCCGATCCGTTGGTATACCCGATGGATCAGCCCTCAAAGTGGAAAGATGCCTTCTATGGGGCCAACTAC AATCGTCTACGGAGCGTGAAGGATAAGTGGGATCCCCAGTCGGTCTTTTACGCTCGCACCAGCGTCGGGTCAGAA GACTGGACCCAAGACTCGGAGGGAAGGTTGTGCAAAGCTTGA |
Transcript | >Hirsu2|3128 ATGCGGCCTCTCGAGTTCGCTGTGCCGCTGCTATTACTGCTGCTACCATGCGTCGCCCAGTCCGCCTGCAAGCCC GTCCCGGGCGACAGCAACTGGCCGCCCCGGCGGGTCTGGAAGCAGCTCAATCAGACGGTTGGCGGCCGCCTGATG GCCACTGTTCCCTTGGGCTCCGTCTGCCATCCGGGAGGATACGGGCCCAGGCGGCCCGAGCCGATCAACGAGACC GCATGTGGTATTCTGAGGGACCAATGGCCCTTTCCACCTGTCTTCTCGGCATCTCCGGCCGACGTCATGAACGCC TACTTCCAGAACGCGTCCTGCAGCCCCTTCTACGATACCAACGGCCGCTGCCGGCTCGGCAACCTCGCCAGCTAC TCCATCGCCGTCTCGGAGGCCCAGCATGTCATCGCCGGCGTCCAGTTTGCTCGGGACAACAACGTCCGGCTGGCG ATCAAGAACACGGGCCATGACTTTATGGGCAAGTCGACCGGCAAGGGAAGCCTCTCTCTCTGGATGCACAACCTG AACAGGAGGGAGATAATCCACAACTACACCAGCTCGGCCTACAGCGGAGCAGCCCTGCGTATGGGCGCCGGCACC ACGGGTGACCAGGCGCTTAGCTTTGCGACAGCTGCTGGCTACGTCCTCGTGACCGGTGACTGTCCGACCGTTGGT GTGGCTGTCGGTTATGCCTCGGGCGGCGGCCATGGCCTGCTCAACAACGTGCACGGCATGGGGGCCGACAACGTA CTCGAGTGGGAGGTCGTCACGGCCGACGGCCGCCACCTTACGGCCAGCCCGGACCAGAACGCCGATCTTTACTGG GCCCTCACCGGCGGCGGCGCCGGCACGTTCGCCGTTGTCCTCTCCGTCACCTACCGGCTGCATCCCGACGTCAGC GTCGGAGCCGCCACGCTCAGTTTCAGCAGGGACTTTGCCCCGAGCAAGCAGGCATACGAGAACGCCGTCCAGGCT TGGTGGCTCTTCCTGCCGACCGTCGTCGATGCCGGCGCTGCCCCAGCCTTCAACCTCATGCCCGACCAGTTTCTC GTTCACAACACGACCGGTCCCAACATGACGGCTGCCGCCATGAACGCTCTGTATGCGCCCTATCTGGCCCAGCTC GACCAGCTGGGCGTCTCGTATGACTTCGCCACGTACACGTCGCCCAACTTCTTGGAGCATTTCAACGCCACCAAC GGCCCCCTACCCGACGGCCCATACACGGCCTCCCCCCTCTTCAACAGTAGAATCATACCGCTCACCGTCTCCCAA GATGCCTCCAGGGCCCGGAACCTGACGCTCGCCATGATGGCTGTCATGGATTACGATCCATCCGGAGCCAACTGG CAGTTCGGGTGTCAGGGTGTGAATGTTGGCGATAAGAACAAGCGCTTCACGCATCCCGATAATGCCCTTGCCGCC TATTGGCGCAACGCCATCGCCATCTGCCTTGAATATTCACTTTACGACTGGGATCTACCCCAGTCGGAGATGCTC CGCCGCAAGCAAGACCTGGCCAACATCATCCATCCACCCATTGTGGCCGCCACGATCGACTCGGGCTCATACCTA AACGAGGCCGATCCGTTGGTATACCCGATGGATCAGCCCTCAAAGTGGAAAGATGCCTTCTATGGGGCCAACTAC AATCGTCTACGGAGCGTGAAGGATAAGTGGGATCCCCAGTCGGTCTTTTACGCTCGCACCAGCGTCGGGTCAGAA GACTGGACCCAAGACTCGGAGGGAAGGTTGTGCAAAGCTTGA |
Gene | >Hirsu2|3128 ATGCGGCCTCTCGAGTTCGCTGTGCCGCTGCTATTACTGCTGCTACCATGCGTCGCCCAGTCCGCCTGCAAGCCC GTCCCGGGCGACAGCAACTGGCCGCCCCGGCGGGTCTGGAAGCAGCTCAATCAGACGGTTGGCGGCCGCCTGATG GCCACTGTTCCCTTGGGCTCCGTCTGCCATCCGGGAGGATACGGGCCCAGGCGGCCCGAGCCGATCAACGAGACC GCATGTGGTATTCTGAGGGACCAATGGCCCTTTCCACCTGTCTTGTACGTTTTTCGGTCTCCTGTGGCGAGTATG GTTCAGTGGCTAACTCTAGCTGACTCGGGCCGCACAGCTCGGCATCTCCGGCCGACGTCATGAACGCCTACTTCC AGAACGCGTCCTGCAGCCCCTTCTACGATACCAACGGCCGCTGCCGGCTCGGCAACCTCGCCAGCTACTCCATCG CCGTCTCGGAGGCCCAGCATGTCATCGCCGGCGTCCAGTTTGCTCGGGACAACAACGTCCGGCTGGCGATCAAGA ACACGGGCCATGAGTGCGTCTTCCCTCCCATGTCGTCGAGATGGAAGGGGGGCGTATACTAAAATCAAGACCTCC AGCTTTATGGGCAAGTCGACCGGCAAGGGAAGCCTCTCTCTCTGGATGCACAACCTGAACAGGAGGGAGATAATC CACAACTACACCAGCTCGGCCTACAGCGGAGCAGCCCTGCGTATGGGCGCCGGCACCACGGGTGACCAGGCGCTT AGCTTTGCGACAGCTGCTGGCTACGTCCTCGTGACCGGTGACTGTCCGACCGTTGGTGTGGCTGTCGGTTATGCC TCGGGCGGCGGCCATGGCCTGCTCAACAACGTGCACGGCATGGGGGCCGACAACGTACTCGAGTGGGAGGTCGTC ACGGCCGACGGCCGCCACCTTACGGCCAGCCCGGACCAGAACGCCGATCTTTACTGGGCCCTCACCGGCGGCGGC GCCGGCACGTTCGCCGTTGTCCTCTCCGTCACCTACCGGCTGCATCCCGACGTCAGCGTCGGAGCCGCCACGCTC AGTTTCAGCAGGGACTTTGCCCCGAGCAAGCAGGCATACGAGAACGCCGTCCAGGCTTGGTGGCTCTTCCTGCCG ACCGTCGTCGATGCCGGCGCTGCCCCAGCCTTCAACCTCATGCCCGACCAGTTTCTCGTTCACAACACGACCGGT CCCAACATGACGGCTGCCGCCATGAACGCTCTGTATGCGCCCTATCTGGCCCAGCTCGACCAGCTGGGCGTCTCG TATGACTTCGCCACGTACACGTCGCCCAACTTCTTGGAGCATTTCAACGCCACCAACGGCCCCCTACCCGACGGC CCATACACGGCCTCCCCCCTCTTCAACAGTAGAATCATACCGCTCACCGTCTCCCAAGATGCCTCCAGGGCCCGG AACCTGACGCTCGCCATGATGGCTGTCATGGATTACGATCCATCCGGAGCCAACTGGCAGTTCGGGTGTCAGGGT GTGAATGTTGGCGATAAGAACAAGCGCTTCACGCATCCCGATAATGCCCTTGCCGCCTATTGGCGCAACGCCATC GCCATCTGCCTTGAATATTCACTTTACGACTGGGATCTACCCCAGTCGGAGATGCTCCGCCGCAAGCAAGACCTG GCCAACATCATCCATCCACCCATTGTGGCCGCCACGATCGACTCGGGCTCATACCTAAACGAGGCCGATCCGTTG GTATACCCGATGGATCAGCCCTCAAAGTGGAAAGATGCCTTCTATGGGGCCAACTACAATCGTCTACGGAGCGTG AAGGATAAGTGGGATCCCCAGTCGGTCTTTTACGCTCGCACCAGCGTCGGGTCAGAAGACTGGACCCAAGACTCG GAGGGAAGGTTGTGCAAAGCTTGA |