© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3108 |
| Gene name | |
| Location | Contig_1797:518..1590 |
| Strand | - |
| Gene length (bp) | 1072 |
| Transcript length (bp) | 1017 |
| Coding sequence length (bp) | 1017 |
| Protein length (aa) | 339 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13347 | MFS_2 | MFS/sugar transport protein | 1.2E-12 | 97 | 238 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14091|SUT1_SCHPO | General alpha-glucoside permease OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sut1 PE=3 SV=1 | 45 | 337 | 6.0E-56 |
| sp|Q69JW3|SUT5_ORYSJ | Sucrose transport protein SUT5 OS=Oryza sativa subsp. japonica GN=SUT5 PE=1 SV=1 | 40 | 338 | 5.0E-37 |
| sp|A2X6E6|SUT5_ORYSI | Sucrose transport protein SUT5 OS=Oryza sativa subsp. indica GN=SUT5 PE=3 SV=1 | 40 | 338 | 6.0E-37 |
| sp|Q39231|SUC2_ARATH | Sucrose transport protein SUC2 OS=Arabidopsis thaliana GN=SUC2 PE=1 SV=2 | 45 | 337 | 2.0E-34 |
| sp|Q9FG00|SUC9_ARATH | Sucrose transport protein SUC9 OS=Arabidopsis thaliana GN=SUC9 PE=1 SV=1 | 82 | 337 | 3.0E-34 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14091|SUT1_SCHPO | General alpha-glucoside permease OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sut1 PE=3 SV=1 | 45 | 337 | 6.0E-56 |
| sp|Q69JW3|SUT5_ORYSJ | Sucrose transport protein SUT5 OS=Oryza sativa subsp. japonica GN=SUT5 PE=1 SV=1 | 40 | 338 | 5.0E-37 |
| sp|A2X6E6|SUT5_ORYSI | Sucrose transport protein SUT5 OS=Oryza sativa subsp. indica GN=SUT5 PE=3 SV=1 | 40 | 338 | 6.0E-37 |
| sp|Q39231|SUC2_ARATH | Sucrose transport protein SUC2 OS=Arabidopsis thaliana GN=SUC2 PE=1 SV=2 | 45 | 337 | 2.0E-34 |
| sp|Q9FG00|SUC9_ARATH | Sucrose transport protein SUC9 OS=Arabidopsis thaliana GN=SUC9 PE=1 SV=1 | 82 | 337 | 3.0E-34 |
| sp|Q9C8X2|SUC5_ARATH | Sucrose transport protein SUC5 OS=Arabidopsis thaliana GN=SUC5 PE=1 SV=1 | 82 | 337 | 4.0E-33 |
| sp|Q67YF8|SUC7_ARATH | Sucrose transport protein SUC7 OS=Arabidopsis thaliana GN=SUC7 PE=2 SV=2 | 82 | 337 | 7.0E-32 |
| sp|Q03411|SUT_SPIOL | Sucrose transport protein OS=Spinacia oleracea PE=2 SV=1 | 82 | 337 | 1.0E-30 |
| sp|Q9FE59|SUC4_ARATH | Sucrose transport protein SUC4 OS=Arabidopsis thaliana GN=SUC4 PE=1 SV=2 | 82 | 337 | 6.0E-30 |
| sp|Q39232|SUC1_ARATH | Sucrose transport protein SUC1 OS=Arabidopsis thaliana GN=SUC1 PE=1 SV=1 | 82 | 337 | 8.0E-30 |
| sp|Q6A329|SUC6_ARATH | Putative sucrose transport protein SUC6 OS=Arabidopsis thaliana GN=SUC6 PE=5 SV=2 | 82 | 337 | 9.0E-30 |
| sp|Q9ZVK6|SUC8_ARATH | Sucrose transport protein SUC8 OS=Arabidopsis thaliana GN=SUC8 PE=1 SV=1 | 82 | 337 | 4.0E-29 |
| sp|Q10R54|SUT1_ORYSJ | Sucrose transport protein SUT1 OS=Oryza sativa subsp. japonica GN=SUT1 PE=1 SV=1 | 81 | 337 | 6.0E-29 |
| sp|Q9LKH3|SUT1_ORYSI | Sucrose transport protein SUT1 OS=Oryza sativa subsp. indica GN=SUT1 PE=3 SV=1 | 81 | 337 | 6.0E-29 |
| sp|O80605|SUC3_ARATH | Sucrose transport protein SUC3 OS=Arabidopsis thaliana GN=SUC3 PE=1 SV=1 | 57 | 337 | 5.0E-28 |
| sp|Q948L0|SUT3_ORYSJ | Sucrose transport protein SUT3 OS=Oryza sativa subsp. japonica GN=SUT3 PE=2 SV=1 | 81 | 337 | 6.0E-28 |
| sp|Q944W2|SUT3_ORYSI | Sucrose transport protein SUT3 OS=Oryza sativa subsp. indica GN=SUT3 PE=3 SV=1 | 81 | 337 | 2.0E-27 |
| sp|Q6YK44|SUT4_ORYSJ | Sucrose transport protein SUT4 OS=Oryza sativa subsp. japonica GN=SUT4 PE=2 SV=1 | 52 | 337 | 4.0E-27 |
| sp|B8AF63|SUT4_ORYSI | Sucrose transport protein SUT4 OS=Oryza sativa subsp. indica GN=SUT4 PE=3 SV=1 | 52 | 337 | 4.0E-27 |
| sp|Q0ILJ3|SUT2_ORYSJ | Sucrose transport protein SUT2 OS=Oryza sativa subsp. japonica GN=SUT2 PE=2 SV=2 | 82 | 337 | 1.0E-24 |
| sp|A2ZN77|SUT2_ORYSI | Sucrose transport protein SUT2 OS=Oryza sativa subsp. indica GN=SUT2 PE=2 SV=2 | 82 | 337 | 2.0E-24 |
| sp|P58355|S45A2_MOUSE | Membrane-associated transporter protein OS=Mus musculus GN=Slc45a2 PE=1 SV=1 | 65 | 287 | 2.0E-23 |
| sp|Q9UMX9|S45A2_HUMAN | Membrane-associated transporter protein OS=Homo sapiens GN=SLC45A2 PE=1 SV=2 | 73 | 282 | 3.0E-21 |
| sp|Q0P5V9|S45A4_MOUSE | Solute carrier family 45 member 4 OS=Mus musculus GN=Slc45a4 PE=1 SV=1 | 82 | 298 | 3.0E-21 |
| sp|Q5BKX6|S45A4_HUMAN | Solute carrier family 45 member 4 OS=Homo sapiens GN=SLC45A4 PE=1 SV=2 | 82 | 299 | 2.0E-19 |
| sp|Q4LE88|S45A2_PIG | Membrane-associated transporter protein OS=Sus scrofa GN=SLC45A2 PE=2 SV=2 | 73 | 297 | 2.0E-19 |
| sp|Q8BIV7|S45A1_MOUSE | Proton-associated sugar transporter A OS=Mus musculus GN=Slc45a1 PE=1 SV=3 | 68 | 293 | 7.0E-14 |
| sp|Q8K4S3|S45A1_RAT | Proton-associated sugar transporter A OS=Rattus norvegicus GN=Slc45a1 PE=2 SV=1 | 62 | 293 | 9.0E-14 |
| sp|Q9Y2W3|S45A1_HUMAN | Proton-associated sugar transporter A OS=Homo sapiens GN=SLC45A1 PE=2 SV=4 | 82 | 293 | 2.0E-13 |
| sp|Q96JT2|S45A3_HUMAN | Solute carrier family 45 member 3 OS=Homo sapiens GN=SLC45A3 PE=2 SV=1 | 65 | 338 | 1.0E-12 |
| sp|Q8K0H7|S45A3_MOUSE | Solute carrier family 45 member 3 OS=Mus musculus GN=Slc45a3 PE=2 SV=1 | 65 | 338 | 3.0E-12 |
| sp|Q95KI5|S45A3_MACFA | Solute carrier family 45 member 3 OS=Macaca fascicularis GN=SLC45A3 PE=2 SV=1 | 65 | 338 | 5.0E-12 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 38 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 70 | 87 | 17 |
| 2 | 107 | 129 | 22 |
| 3 | 142 | 161 | 19 |
| 4 | 181 | 203 | 22 |
| 5 | 258 | 280 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3108 MAAPLSSSRGGGGEPSSAGRGQAAVGPGDGRLPAAERACRRVVDERSALLASDAAGADHAADEAQRTKSLWYMAM LTVSIGGLQIAWSVELSNGSPYLLSLGLSKSLMALVWIAGPLTGTLVVPYVGVLSDRCRLRWGRRRPFLVGGALA TVLSLLFLAWVREIVGGVVGLAGGDPGSPAVRTAVVAAAVVGIYLLDIAVNTVQAACRAFIVDAAPAHQQELANS MASRFTGVGNILGYLAGYADLPAHLWFLGDTQFKILCAIASVALAATVALSVASIPERDPRTGGGGRARKAPGFA SFFLHIVASIRRLPPQTKRVCQVQFCAWVGFFPLLFYT* |
| Coding | >Hirsu2|3108 ATGGCTGCCCCCCTTTCGTCCTCCCGCGGCGGCGGCGGCGAGCCGTCGTCGGCCGGCCGTGGCCAGGCGGCCGTG GGACCCGGCGACGGGCGGCTGCCGGCAGCGGAACGAGCCTGCCGCCGGGTCGTCGACGAGCGCTCCGCCCTCCTA GCTTCCGACGCGGCCGGGGCGGACCACGCCGCCGACGAGGCGCAGCGCACCAAGAGCCTGTGGTACATGGCGATG CTGACGGTCAGCATCGGCGGGCTCCAGATCGCCTGGTCCGTCGAGCTGTCCAACGGGTCGCCGTACCTGCTGTCG CTGGGCCTGAGCAAGTCGCTGATGGCGCTGGTCTGGATCGCCGGCCCGCTGACGGGCACCCTGGTGGTGCCCTAC GTCGGCGTCCTGAGCGACCGCTGCCGCCTCCGCTGGGGCAGGCGGCGGCCGTTCCTGGTCGGCGGCGCCCTGGCC ACCGTCCTGTCCCTGCTGTTCCTGGCCTGGGTCCGCGAGATTGTCGGCGGCGTCGTCGGGCTGGCGGGCGGCGAC CCGGGCTCGCCCGCGGTCCGCACCGCCGTCGTCGCCGCCGCCGTCGTCGGCATCTACCTGCTCGACATCGCCGTC AACACGGTCCAGGCCGCCTGCCGCGCCTTCATCGTCGACGCCGCGCCCGCCCACCAGCAGGAGCTGGCCAACTCC ATGGCCAGCCGCTTCACCGGCGTCGGCAACATCCTGGGCTACCTGGCCGGCTACGCCGACCTGCCCGCCCACCTC TGGTTCCTGGGCGACACGCAGTTCAAGATCCTCTGCGCCATCGCCTCGGTCGCGCTCGCCGCCACCGTCGCCCTC AGCGTCGCCTCCATCCCGGAGCGGGACCCCCGGACGGGCGGAGGGGGCCGGGCCAGGAAGGCCCCGGGCTTCGCC TCCTTCTTCTTGCACATCGTCGCGTCCATCAGGCGGCTCCCGCCGCAGACGAAGCGGGTCTGCCAGGTGCAGTTC TGCGCCTGGGTCGGCTTCTTCCCGCTCCTGTTCTACACATGA |
| Transcript | >Hirsu2|3108 ATGGCTGCCCCCCTTTCGTCCTCCCGCGGCGGCGGCGGCGAGCCGTCGTCGGCCGGCCGTGGCCAGGCGGCCGTG GGACCCGGCGACGGGCGGCTGCCGGCAGCGGAACGAGCCTGCCGCCGGGTCGTCGACGAGCGCTCCGCCCTCCTA GCTTCCGACGCGGCCGGGGCGGACCACGCCGCCGACGAGGCGCAGCGCACCAAGAGCCTGTGGTACATGGCGATG CTGACGGTCAGCATCGGCGGGCTCCAGATCGCCTGGTCCGTCGAGCTGTCCAACGGGTCGCCGTACCTGCTGTCG CTGGGCCTGAGCAAGTCGCTGATGGCGCTGGTCTGGATCGCCGGCCCGCTGACGGGCACCCTGGTGGTGCCCTAC GTCGGCGTCCTGAGCGACCGCTGCCGCCTCCGCTGGGGCAGGCGGCGGCCGTTCCTGGTCGGCGGCGCCCTGGCC ACCGTCCTGTCCCTGCTGTTCCTGGCCTGGGTCCGCGAGATTGTCGGCGGCGTCGTCGGGCTGGCGGGCGGCGAC CCGGGCTCGCCCGCGGTCCGCACCGCCGTCGTCGCCGCCGCCGTCGTCGGCATCTACCTGCTCGACATCGCCGTC AACACGGTCCAGGCCGCCTGCCGCGCCTTCATCGTCGACGCCGCGCCCGCCCACCAGCAGGAGCTGGCCAACTCC ATGGCCAGCCGCTTCACCGGCGTCGGCAACATCCTGGGCTACCTGGCCGGCTACGCCGACCTGCCCGCCCACCTC TGGTTCCTGGGCGACACGCAGTTCAAGATCCTCTGCGCCATCGCCTCGGTCGCGCTCGCCGCCACCGTCGCCCTC AGCGTCGCCTCCATCCCGGAGCGGGACCCCCGGACGGGCGGAGGGGGCCGGGCCAGGAAGGCCCCGGGCTTCGCC TCCTTCTTCTTGCACATCGTCGCGTCCATCAGGCGGCTCCCGCCGCAGACGAAGCGGGTCTGCCAGGTGCAGTTC TGCGCCTGGGTCGGCTTCTTCCCGCTCCTGTTCTACACATGA |
| Gene | >Hirsu2|3108 ATGGCTGCCCCCCTTTCGTCCTCCCGCGGCGGCGGCGGCGAGCCGTCGTCGGCCGGCCGTGGCCAGGCGGCCGTG GGACCCGGCGACGGGCGGCTGCCGGCAGCGGAACGAGCCTGCCGCCGGGTCGTCGACGAGCGCTCCGCCCTCCTA GCTTCCGACGCGGCCGGGGCGGACCACGCCGCCGACGAGGCGCAGCGCACCAAGAGCCTGTGGTACATGGCGATG CTGACGGTCAGCATCGGCGGGCTCCAGATCGCCTGGTCCGTCGAGCTGTCCAACGGGTCGCCGTACCTGCTGTCG CTGGGCCTGAGCAAGTCGCTGATGGCGCTGGTCTGGATCGCCGGCCCGCTGACGGGCACCCTGGTGGTGCCCTAC GTCGGCGTCCTGAGCGACCGCTGCCGCCTCCGCTGGGGCAGGCGGCGGCCGTTCCTGGTCGGCGGCGCCCTGGCC ACCGTCCTGTCCCTGCTGTTCCTGGCCTGGGTCCGCGAGATTGTCGGCGGCGTCGTCGGGCTGGCGGGCGGCGAC CCGGGCTCGCCCGCGGTCCGCACCGCCGTCGTCGCCGCCGCCGTCGTCGGCATCTACCTGCTCGACATCGCCGTC AACACGGTCCAGGCCGCCTGCCGCGCCTTCATCGTCGACGCCGCGCCCGCCCACCAGCAGGAGCTGGCCAACTCC ATGGCCAGCCGCTTCACCGGCGTCGGCAACATCCTGGGCTACCTGGCCGGCTACGCCGACCTGCCCGCCCACCTC TGGTTCCTGGGCGACACGCAGTTCAAGATCCTCTGCGCCATCGCCTCGGTCGCGCTCGCCGCCACCGTCGCCCTC AGCGTCGCCTCCATCCCGGAGCGGGACCCCCGGACGGGCGGAGGGGGCCGGGCCAGGAAGGCCCCGGGCTTCGCC TCCTTCTTCTTGCACATCGTCGCGTCCATCAGGCGGCTCCCGCCGCAGACGAAGCGGGTCTGCCAGGTGCAGTTC TGCGCCTGGGTCGGCTTCTTCCCGCTCCTGTTCTACACGTCATCGTACATTGGCGAGATCTACGTGCAGCCGTAC CTGAGGGAGAGGCCGCAGATGA |