© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|31 |
| Gene name | |
| Location | Contig_100:18736..19707 |
| Strand | + |
| Gene length (bp) | 971 |
| Transcript length (bp) | 918 |
| Coding sequence length (bp) | 918 |
| Protein length (aa) | 306 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.5166 | 0.5346 | 0.3987 | 0.1086 | 0.31 | 0.0625 | 0.1302 | 0.0843 | 0.0661 | 0.0024 |
| Orthofinder run ID | 4 |
| Orthogroup | 6585 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps kimflemingae | Ophio5|1710 |
| Ophiocordyceps subramaniannii | Hirsu2|31 (this protein) |
| Ophiocordyceps subramaniannii | Hirsu2|6622 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|31 MPTVVEYGISGLGPRTVLLVAYLAITTIAERPSFEEVAKANPFKIRLTIFEKQDERHACCGEAYHLNSQATMNTG IPGPEKIRNQDKIPVEFHGLVSAITNLAEGIAGKLEPEAVSRISDLREMNVVAACMMANVISADGKLDVSIPFVV RAEMGKLLRTLFQKTKQLIRHHVPELEIVERYSAQVEDVDLSNPTHPALIVKHSSDGHKGRYVFDCVHFNNGPTL KPTAPDPVSLDSYSSLPNRDAVRAYLAGRGLLDEHDYLKPNSSILISGMGLSAADYFCILIGFTRILSLCSERKV LSYGR* |
| Coding | >Hirsu2|31 ATGCCGACGGTCGTAGAATACGGCATTTCCGGGTTAGGTCCTCGAACCGTCTTGCTCGTTGCTTATCTGGCGATA ACGACAATTGCGGAACGGCCATCCTTCGAAGAAGTTGCCAAGGCCAATCCGTTCAAGATCCGCCTCACGATATTC GAGAAGCAGGATGAGAGACACGCCTGCTGCGGTGAAGCCTATCACCTGAACAGCCAAGCTACGATGAACACCGGC ATTCCGGGTCCAGAAAAGATCCGAAACCAAGACAAAATCCCCGTCGAGTTCCATGGCCTGGTCAGCGCCATCACG AACCTTGCGGAGGGCATTGCCGGGAAGTTGGAGCCGGAAGCAGTAAGCCGCATCAGCGATCTCAGGGAAATGAAT GTCGTAGCAGCGTGCATGATGGCGAATGTCATTTCTGCCGATGGGAAGCTGGATGTTTCGATCCCCTTCGTGGTC AGGGCGGAAATGGGCAAATTGCTGCGAACCCTTTTCCAGAAGACGAAGCAGTTGATCAGGCATCACGTTCCCGAA CTCGAAATCGTCGAACGCTATTCGGCCCAAGTGGAAGACGTCGATCTGTCCAACCCGACGCATCCTGCCCTGATA GTCAAGCACTCTTCTGACGGGCACAAGGGCCGGTACGTATTCGACTGTGTACATTTCAACAATGGCCCGACGTTG AAGCCTACCGCGCCCGACCCCGTTTCGCTCGACTCCTACTCCTCCCTCCCCAACCGAGACGCTGTGAGGGCTTAC CTGGCCGGACGGGGCCTTCTGGACGAGCACGACTACCTGAAACCGAACAGTAGCATCCTCATATCCGGCATGGGT CTTTCAGCGGCCGATTACTTTTGCATTCTCATCGGCTTCACTCGAATTCTCAGCCTATGCAGCGAGCGAAAAGTA CTCTCCTACGGACGGTGA |
| Transcript | >Hirsu2|31 ATGCCGACGGTCGTAGAATACGGCATTTCCGGGTTAGGTCCTCGAACCGTCTTGCTCGTTGCTTATCTGGCGATA ACGACAATTGCGGAACGGCCATCCTTCGAAGAAGTTGCCAAGGCCAATCCGTTCAAGATCCGCCTCACGATATTC GAGAAGCAGGATGAGAGACACGCCTGCTGCGGTGAAGCCTATCACCTGAACAGCCAAGCTACGATGAACACCGGC ATTCCGGGTCCAGAAAAGATCCGAAACCAAGACAAAATCCCCGTCGAGTTCCATGGCCTGGTCAGCGCCATCACG AACCTTGCGGAGGGCATTGCCGGGAAGTTGGAGCCGGAAGCAGTAAGCCGCATCAGCGATCTCAGGGAAATGAAT GTCGTAGCAGCGTGCATGATGGCGAATGTCATTTCTGCCGATGGGAAGCTGGATGTTTCGATCCCCTTCGTGGTC AGGGCGGAAATGGGCAAATTGCTGCGAACCCTTTTCCAGAAGACGAAGCAGTTGATCAGGCATCACGTTCCCGAA CTCGAAATCGTCGAACGCTATTCGGCCCAAGTGGAAGACGTCGATCTGTCCAACCCGACGCATCCTGCCCTGATA GTCAAGCACTCTTCTGACGGGCACAAGGGCCGGTACGTATTCGACTGTGTACATTTCAACAATGGCCCGACGTTG AAGCCTACCGCGCCCGACCCCGTTTCGCTCGACTCCTACTCCTCCCTCCCCAACCGAGACGCTGTGAGGGCTTAC CTGGCCGGACGGGGCCTTCTGGACGAGCACGACTACCTGAAACCGAACAGTAGCATCCTCATATCCGGCATGGGT CTTTCAGCGGCCGATTACTTTTGCATTCTCATCGGCTTCACTCGAATTCTCAGCCTATGCAGCGAGCGAAAAGTA CTCTCCTACGGACGGTGA |
| Gene | >Hirsu2|31 ATGCCGACGGTCGTAGAATACGGCATTTCCGGGTTAGGTCCTCGAACCGTCTTGCTCGTTGCTTATCTGGCGATA ACGACAATTGCGGAACGGCCATCCTTCGAAGAAGTTGCCAAGGCCAATCCGTTCAAGATCCGCCTCACGATATTC GAGAAGCAGGATGAGAGACACGCCTGCTGCGGTGAAGCCTATCACCTGAACAGCCAAGCTACGATGAACACCGGC ATTCCGGGTCCAGAAAAGATCCGAAACCAAGACAAAATCCCCGTCGAGTTCCATGGCCTGGTCAGCGCCATCACG AACCTTGCGGAGGGCATTGCCGGGAAGTTGGAGCCGGAAGCAGTAAGCCGCATCAGCGATCTCAGGGAAATGAAT GTCGTAGCAGCGTGCATGATGGCGAATGTCATTTCTGCCGATGGGAAGCTGGATGTTTCGATCCCCTTCGTGGTC AGGGCGGAAATGGGCAAATTGCTGCGAACCCTTTTCCAGAAGACGAAGCAGTTGATCAGGCATCACGTTCCCGAA CTCGAAATCGTCGAACGCTATTCGGCCCAAGTGGAAGACGTCGATCTGTCCAACCCGACGCATCCTGCCCTGATA GTCAAGCACTCTTCTGACGGGCACAAGGGCCGGTACGTATTCGACTGTGTACATTTCAACAATGGCCCGACGTTG AAGCCTACCGCGCCCGACCCCGTTTCGCTCGACTCCTACTCCTCCCTCCCCAACCGAGACGCTGTGAGGGCTTAC CTGGCCGGACGGGGCCTTCTGGACGAGCACGACTACCTGAAACCGAACAGTAGCATCCTCATATCCGGCATGGGT CTTTCAGCGGCCGATTACTTTTGCATTCTCATCGGCTTCACTCGAATTCTCAGCCTATGCAGCGAGCGAAAAGTA CTCGTGGCTGACGAAGTGGAAGCGAAAAAATATCCAAACCTGCTCACCTTTGTCAGTCCTACGGACGGTGA |