© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3091 |
| Gene name | |
| Location | Contig_179:20783..21335 |
| Strand | + |
| Gene length (bp) | 552 |
| Transcript length (bp) | 444 |
| Coding sequence length (bp) | 444 |
| Protein length (aa) | 148 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF20413 | Kiaa1109_N | Kiaa1109 N-terminal region | 3.5E-38 | 39 | 147 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q12150|CSF1_YEAST | Protein CSF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSF1 PE=3 SV=1 | 26 | 147 | 1.0E-16 |
| sp|Q74ZX0|CSF1_ASHGO | Protein CSF1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CSF1 PE=3 SV=1 | 32 | 147 | 1.0E-12 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 22 | 44 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3091 MSSAGDVIVARASNPLAFNSEFPAYVVICALLTIFFLLYFNRLFASIVSYAIRAITWHRYRIYIDVKALQLSLLG GRIFFTGLRYHGSNQTFLVQHGTITWRYWLRRVREVDIRASAGPDDGVAVAKEKNAARPSRISVKLVGLEWF* |
| Coding | >Hirsu2|3091 ATGTCTTCCGCTGGCGATGTGATCGTCGCCAGGGCCTCGAATCCCCTCGCCTTCAACTCCGAATTCCCCGCCTAC GTCGTCATCTGCGCGCTCTTGACCATCTTCTTCCTGCTCTACTTCAACCGATTGTTTGCATCCATCGTCTCGTAT GCCATCAGAGCCATCACTTGGCATCGGTACCGCATTTACATCGATGTCAAGGCTCTACAGCTGTCCCTCCTCGGC GGCCGCATCTTCTTCACCGGTCTGCGATACCACGGATCCAATCAGACTTTCCTGGTGCAGCACGGCACCATAACC TGGCGCTACTGGCTTCGTCGCGTTCGAGAGGTGGATATTCGCGCCTCGGCCGGTCCGGATGATGGCGTCGCCGTC GCAAAAGAGAAGAATGCGGCCCGTCCATCCCGCATCAGCGTCAAGCTCGTTGGCCTGGAATGGTTTTAG |
| Transcript | >Hirsu2|3091 ATGTCTTCCGCTGGCGATGTGATCGTCGCCAGGGCCTCGAATCCCCTCGCCTTCAACTCCGAATTCCCCGCCTAC GTCGTCATCTGCGCGCTCTTGACCATCTTCTTCCTGCTCTACTTCAACCGATTGTTTGCATCCATCGTCTCGTAT GCCATCAGAGCCATCACTTGGCATCGGTACCGCATTTACATCGATGTCAAGGCTCTACAGCTGTCCCTCCTCGGC GGCCGCATCTTCTTCACCGGTCTGCGATACCACGGATCCAATCAGACTTTCCTGGTGCAGCACGGCACCATAACC TGGCGCTACTGGCTTCGTCGCGTTCGAGAGGTGGATATTCGCGCCTCGGCCGGTCCGGATGATGGCGTCGCCGTC GCAAAAGAGAAGAATGCGGCCCGTCCATCCCGCATCAGCGTCAAGCTCGTTGGCCTGGAATGGTTTTAG |
| Gene | >Hirsu2|3091 ATGTCTTCCGCTGGCGATGTGATCGTCGCCAGGGCCTCGAATCCCCTCGCCTTCAACTCGTGAGTATCCAACCAC AGGCCCGGACCCTGTTCTCCGCTGACAGTCCTTGGCACCCAGCGAATTCCCCGCCTACGTCGTCATCTGCGCGCT CTTGACCATCTTCTTCCTGCTCTACTTCAACCGATTGTTTGCATCCATCGTCTCGTATGCCATCAGAGCCATCAC TTGGCATCGGTACCGCATTTACATCGATGTCAAGGCTCTACAGCTGTCCCTCCTCGGCGGCCGCATCTTCTTCAC CGGTCTGCGATACCACGGATCCAATCAGACTTTCCTGGTGCAGCACGGCACCATAACCTGGCGCTACTGGCTTCG TCGCGTTCGAGAGGTGGATATTCGCGCCTCGGCCGGTCCGGATGATGGCGTCGCCGTCGCAAAAGAGAAGAATGC GGCCCGTCCATCCCGCATCAGCGTCAAGCTCGTTGGCCTGGAATGGTTTGTCTATAATCGCAGCCCGGCCTACGA CACCATTGTTGCCGGCATCGTCAGTAG |