© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3090 |
| Gene name | |
| Location | Contig_179:18371..19975 |
| Strand | - |
| Gene length (bp) | 1604 |
| Transcript length (bp) | 1416 |
| Coding sequence length (bp) | 1416 |
| Protein length (aa) | 472 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03619 | Solute_trans_a | Organic solute transporter Ostalpha | 3.3E-93 | 14 | 281 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q09906|TM184_SCHPO | Transmembrane protein 184 homolog C30D11.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC30D11.06c PE=1 SV=1 | 16 | 433 | 2.0E-116 |
| sp|P36142|TM184_YEAST | Transmembrane protein 184 homolog YKR051W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKR051W PE=1 SV=1 | 20 | 359 | 4.0E-71 |
| sp|Q54WM0|T1843_DICDI | Transmembrane protein 184 homolog DDB_G0279555 OS=Dictyostelium discoideum GN=tmem184C PE=3 SV=1 | 15 | 314 | 1.0E-64 |
| sp|Q6ZMB5|T184A_HUMAN | Transmembrane protein 184A OS=Homo sapiens GN=TMEM184A PE=2 SV=1 | 16 | 314 | 8.0E-51 |
| sp|Q1RMW2|T184A_BOVIN | Transmembrane protein 184A OS=Bos taurus GN=TMEM184A PE=2 SV=1 | 16 | 314 | 1.0E-49 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q09906|TM184_SCHPO | Transmembrane protein 184 homolog C30D11.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC30D11.06c PE=1 SV=1 | 16 | 433 | 2.0E-116 |
| sp|P36142|TM184_YEAST | Transmembrane protein 184 homolog YKR051W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKR051W PE=1 SV=1 | 20 | 359 | 4.0E-71 |
| sp|Q54WM0|T1843_DICDI | Transmembrane protein 184 homolog DDB_G0279555 OS=Dictyostelium discoideum GN=tmem184C PE=3 SV=1 | 15 | 314 | 1.0E-64 |
| sp|Q6ZMB5|T184A_HUMAN | Transmembrane protein 184A OS=Homo sapiens GN=TMEM184A PE=2 SV=1 | 16 | 314 | 8.0E-51 |
| sp|Q1RMW2|T184A_BOVIN | Transmembrane protein 184A OS=Bos taurus GN=TMEM184A PE=2 SV=1 | 16 | 314 | 1.0E-49 |
| sp|Q3UFJ6|T184A_MOUSE | Transmembrane protein 184A OS=Mus musculus GN=Tmem184a PE=2 SV=1 | 16 | 314 | 5.0E-47 |
| sp|Q8BG09|T184B_MOUSE | Transmembrane protein 184B OS=Mus musculus GN=Tmem184b PE=2 SV=1 | 10 | 314 | 8.0E-47 |
| sp|Q4QQS1|T184A_RAT | Transmembrane protein 184A OS=Rattus norvegicus GN=Tmem184a PE=2 SV=1 | 16 | 314 | 1.0E-46 |
| sp|Q6GQE1|T184C_XENLA | Transmembrane protein 184C OS=Xenopus laevis GN=tmem184c PE=2 SV=1 | 16 | 339 | 1.0E-46 |
| sp|Q28CV2|T184C_XENTR | Transmembrane protein 184C OS=Xenopus tropicalis GN=tmem184c PE=2 SV=1 | 16 | 335 | 4.0E-46 |
| sp|A2VDL9|T184B_BOVIN | Transmembrane protein 184B OS=Bos taurus GN=TMEM184B PE=2 SV=1 | 10 | 314 | 4.0E-46 |
| sp|Q9Y519|T184B_HUMAN | Transmembrane protein 184B OS=Homo sapiens GN=TMEM184B PE=1 SV=2 | 10 | 314 | 8.0E-46 |
| sp|Q75JN3|T1842_DICDI | Transmembrane protein 184 homolog DDB_G0276041 OS=Dictyostelium discoideum GN=tmem184B PE=3 SV=1 | 16 | 282 | 2.0E-45 |
| sp|Q54PI4|T1841_DICDI | Transmembrane protein 184 homolog DDB_G0284525 OS=Dictyostelium discoideum GN=tmem184A PE=3 SV=1 | 11 | 318 | 6.0E-45 |
| sp|Q3TPR7|T184C_MOUSE | Transmembrane protein 184C OS=Mus musculus GN=Tmem184c PE=2 SV=1 | 16 | 419 | 3.0E-44 |
| sp|Q810F5|T184C_RAT | Transmembrane protein 184C OS=Rattus norvegicus GN=Tmem184c PE=2 SV=1 | 16 | 324 | 1.0E-43 |
| sp|Q5ZMP3|T184C_CHICK | Transmembrane protein 184C OS=Gallus gallus GN=TMEM184C PE=2 SV=1 | 16 | 339 | 1.0E-43 |
| sp|Q5RET6|T184C_PONAB | Transmembrane protein 184C OS=Pongo abelii GN=TMEM184C PE=2 SV=1 | 16 | 310 | 4.0E-43 |
| sp|Q9NVA4|T184C_HUMAN | Transmembrane protein 184C OS=Homo sapiens GN=TMEM184C PE=2 SV=2 | 16 | 310 | 4.0E-43 |
| sp|Q17QL9|T184C_BOVIN | Transmembrane protein 184C OS=Bos taurus GN=TMEM184C PE=2 SV=1 | 16 | 337 | 2.0E-42 |
| sp|Q94CA0|LAZH1_ARATH | Protein LAZ1 homolog 1 OS=Arabidopsis thaliana GN=At1g77220 PE=2 SV=1 | 1 | 276 | 8.0E-41 |
| sp|F4JTN2|LAZ1_ARATH | Protein LAZ1 OS=Arabidopsis thaliana GN=LAZ1 PE=1 SV=1 | 14 | 276 | 1.0E-36 |
| sp|Q5BPZ5|LAZH2_ARATH | Protein LAZ1 homolog 2 OS=Arabidopsis thaliana GN=At1g23070 PE=2 SV=1 | 13 | 276 | 3.0E-34 |
| sp|A9ULC7|OSTA_XENTR | Organic solute transporter subunit alpha OS=Xenopus tropicalis GN=slc51a PE=2 SV=2 | 56 | 240 | 3.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 34 | 19 |
| 2 | 47 | 69 | 22 |
| 3 | 84 | 106 | 22 |
| 4 | 143 | 165 | 22 |
| 5 | 175 | 197 | 22 |
| 6 | 217 | 239 | 22 |
| 7 | 254 | 276 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3090 MGGGTGQKFTYATTVVAGVASLAATILSVVSIWLQAKNYRKPLLQRYVIRILLMVPIYSIASWASMVSSTTAAFL DPIRDIYEAFTIYTFFQLLINFLGGERSLIIMTHGRAPVQHLWPLNHVLRTVDISDPHTFLSIKRGILQYTWLKP ILAFAAIIMKATGTYQEGYIGLGSGYFWSGIIYNISVTVSLYSLGLFWVCMHRDLQPFRPVPKFLCIKLIIFASY WQGFFLSILVWLGAIPDDVEGYTRDNLAAAIQDALICIEMPVFAVAHWYAFSWHDFANNNIYSARMPLNHAFRDA FGIRDLIEDSKETFRGSNYGYRAFDSGDKVMAHEDSKSRLARLREGMRYERGGKGKYWIPKPGEINATSPLLGHH GPNGPNGGPSSTRPDQLNESQHGTFDEPELDGDDERLFESARELEYGDWNYPVITASEPLSERYRSPSGRSSPPH PAPGSGGRRPIGCAAAASCPD* |
| Coding | >Hirsu2|3090 ATGGGGGGCGGGACAGGCCAGAAGTTCACCTATGCCACGACGGTGGTTGCCGGAGTCGCCTCTCTGGCAGCCACT ATTCTGTCGGTCGTGTCAATATGGCTTCAAGCAAAGAACTATCGGAAGCCTCTCCTCCAGAGATATGTCATCCGC ATCCTGCTCATGGTGCCCATTTACTCGATCGCCTCTTGGGCCAGCATGGTGTCGTCGACCACGGCCGCCTTCCTT GACCCGATTCGGGACATCTATGAGGCCTTCACCATCTACACCTTCTTCCAGCTCCTCATCAACTTTCTCGGCGGA GAGCGGTCCCTCATCATCATGACGCATGGCCGCGCACCCGTCCAGCACCTCTGGCCCCTCAATCACGTTCTTCGC ACCGTCGACATCTCAGACCCCCACACCTTCCTCTCCATCAAGCGCGGCATTCTTCAGTACACGTGGCTCAAACCC ATCCTCGCCTTTGCCGCCATCATCATGAAGGCGACTGGGACATACCAAGAGGGTTACATCGGCCTCGGGTCCGGC TACTTCTGGAGCGGCATCATATACAACATCAGCGTCACCGTCAGCCTGTACTCACTCGGCTTGTTTTGGGTCTGC ATGCACCGAGACCTGCAGCCATTCCGGCCGGTCCCCAAGTTTCTGTGCATCAAGCTCATCATCTTTGCCTCGTAC TGGCAAGGATTCTTCTTATCTATCCTCGTTTGGCTGGGCGCCATCCCTGACGACGTCGAGGGCTACACTCGCGAC AATCTCGCTGCCGCTATACAGGATGCTCTTATCTGCATCGAAATGCCAGTCTTCGCCGTGGCGCACTGGTACGCC TTCTCGTGGCACGACTTCGCAAACAACAACATCTACTCGGCACGGATGCCTCTCAACCACGCCTTCCGAGACGCG TTTGGCATCAGGGACCTGATTGAGGATTCCAAAGAAACCTTCAGAGGTAGCAACTACGGCTACCGCGCATTCGAC TCCGGGGACAAAGTCATGGCGCACGAGGACTCCAAATCAAGACTGGCGAGGCTCCGCGAAGGAATGCGCTACGAG AGAGGCGGAAAGGGCAAGTACTGGATACCCAAGCCGGGCGAAATCAACGCAACCTCTCCGCTGCTGGGCCATCAT GGCCCCAATGGCCCCAACGGCGGGCCAAGCTCAACTCGACCCGACCAGTTGAACGAGAGCCAACATGGGACGTTC GACGAACCCGAGCTCGATGGAGATGATGAGCGTCTTTTCGAGTCTGCGCGGGAGCTGGAGTATGGAGATTGGAAC TATCCCGTCATCACCGCCAGTGAACCGCTGAGCGAACGATACCGGTCTCCCAGTGGACGCTCTTCCCCCCCGCAT CCCGCACCCGGAAGCGGCGGCAGGCGGCCCATCGGCTGTGCAGCCGCAGCAAGTTGTCCCGATTAA |
| Transcript | >Hirsu2|3090 ATGGGGGGCGGGACAGGCCAGAAGTTCACCTATGCCACGACGGTGGTTGCCGGAGTCGCCTCTCTGGCAGCCACT ATTCTGTCGGTCGTGTCAATATGGCTTCAAGCAAAGAACTATCGGAAGCCTCTCCTCCAGAGATATGTCATCCGC ATCCTGCTCATGGTGCCCATTTACTCGATCGCCTCTTGGGCCAGCATGGTGTCGTCGACCACGGCCGCCTTCCTT GACCCGATTCGGGACATCTATGAGGCCTTCACCATCTACACCTTCTTCCAGCTCCTCATCAACTTTCTCGGCGGA GAGCGGTCCCTCATCATCATGACGCATGGCCGCGCACCCGTCCAGCACCTCTGGCCCCTCAATCACGTTCTTCGC ACCGTCGACATCTCAGACCCCCACACCTTCCTCTCCATCAAGCGCGGCATTCTTCAGTACACGTGGCTCAAACCC ATCCTCGCCTTTGCCGCCATCATCATGAAGGCGACTGGGACATACCAAGAGGGTTACATCGGCCTCGGGTCCGGC TACTTCTGGAGCGGCATCATATACAACATCAGCGTCACCGTCAGCCTGTACTCACTCGGCTTGTTTTGGGTCTGC ATGCACCGAGACCTGCAGCCATTCCGGCCGGTCCCCAAGTTTCTGTGCATCAAGCTCATCATCTTTGCCTCGTAC TGGCAAGGATTCTTCTTATCTATCCTCGTTTGGCTGGGCGCCATCCCTGACGACGTCGAGGGCTACACTCGCGAC AATCTCGCTGCCGCTATACAGGATGCTCTTATCTGCATCGAAATGCCAGTCTTCGCCGTGGCGCACTGGTACGCC TTCTCGTGGCACGACTTCGCAAACAACAACATCTACTCGGCACGGATGCCTCTCAACCACGCCTTCCGAGACGCG TTTGGCATCAGGGACCTGATTGAGGATTCCAAAGAAACCTTCAGAGGTAGCAACTACGGCTACCGCGCATTCGAC TCCGGGGACAAAGTCATGGCGCACGAGGACTCCAAATCAAGACTGGCGAGGCTCCGCGAAGGAATGCGCTACGAG AGAGGCGGAAAGGGCAAGTACTGGATACCCAAGCCGGGCGAAATCAACGCAACCTCTCCGCTGCTGGGCCATCAT GGCCCCAATGGCCCCAACGGCGGGCCAAGCTCAACTCGACCCGACCAGTTGAACGAGAGCCAACATGGGACGTTC GACGAACCCGAGCTCGATGGAGATGATGAGCGTCTTTTCGAGTCTGCGCGGGAGCTGGAGTATGGAGATTGGAAC TATCCCGTCATCACCGCCAGTGAACCGCTGAGCGAACGATACCGGTCTCCCAGTGGACGCTCTTCCCCCCCGCAT CCCGCACCCGGAAGCGGCGGCAGGCGGCCCATCGGCTGTGCAGCCGCAGCAAGTTGTCCCGATTAA |
| Gene | >Hirsu2|3090 ATGGGGGGCGGGACAGGCCAGAAGTTCACCTATGCCACGACGGTGGTTGCCGGAGTCGCCTCTCTGGCAGCCACT ATTCTGTCGGTCGTGTACGTTGACGATGCCGCCTTCAGCAAGCTCTGGGTTCATGTGGACGCGCTAACACGGCCG ACGCGTTGGGACAGGTCAATATGGCTTCAAGCAAAGAACTATCGGAAGCCTCTCCTCCAGAGATATGTCATCCGC ATCCTGCTCATGGTGCCCATTTACTCGATCGCCTCTTGGGCCAGCATGGTGTCGTCGACCACGGCCGCCTTCCTT GACCCGATTCGGGACATCTATGAGGCCTTCACCATCTACACCTTCTTCCAGCTCCTCATCAACTTTCTCGGCGGA GAGCGGTCCCTCATCATCATGACGCATGGCCGCGCACCCGTCCAGCACCTCTGGCCCCTCAATCACGTTCTTCGC ACCGTCGACATCTCAGACCCCCACACCTTCCTCTCCATCAAGCGCGGCATTCTTCAGTACACGTGGCTCAAACCC ATCCTCGCCTTTGCCGCCATCATCATGAAGGCGACTGGGACATACCAAGAGGGTTACATCGGCCTCGGGTCCGGC TACTTCTGGAGCGGCATCATATACAACATCAGCGTCACCGTCAGCCTGTACTCACTCGGCTTGTTTTGGGTCTGC ATGCACCGAGACCTGCAGCCATTCCGGCCGGTCCCCAAGTTTCTGTGCATCAAGCTCATCATCTTTGCCTCGTAC TGGCAAGGATTCTTCTTATCTATCCTCGTTTGGCTGGGCGCCATCCCTGACGACGTCGAGGGCTACACTCGCGAC AATCTCGCTGCCGCTATACAGGATGCTCTTATCTGCATCGAAATGCCAGTCTTCGCCGTGGCGCACTGGTACGCC TTCTCGTGGCACGACTTCGCAAACAACAACATCTACTCGGCACGGATGCCTCTCAACCACGCCTTCCGAGACGCG TTTGGCATCAGGGACCTGATTGAGGATTCCAAAGAAACCTTCAGAGGTAGCAACTACGGCTACCGCGCATTCGAC TCCGGGGACAAAGTCATGGCGCACGAGGACTCCAAATCAAGACTGGCGAGGCTCCGCGAAGGAATGCGCTACGAG AGAGGCGGAAAGGGCAAGTACTGGATACCCAAGCCGGGCGAAATCAACGCAACCTCTCCGCTGCTGGGCCATCAT GGCCCCAATGGCCCCAACGGCGGGCCAAGCTCAACTCGACCCGACCAGTTGAACGAGAGCCAACATGGGACGTTC GACGAACCCGAGCTCGATGGAGATGATGAGCGTCTTTTCGAGTCTGCGCGGGAGCTGGAGTATGGAGATTGGAAC GTGAGTACGGTCAAACCATGGCCACGAGTCGCCAGGCTAACTTTTCCTCTCCTCGAGTATCCCGTCATCACCGCC AGTGAACCGCTGAGCGAACGATACCGGTCTCCCAGTGGAGTTCTGAGGCCAAGGGCACCCGGTCGAGGCAGCTCG GCCTCCGTATCGCCCGGCAGCGCTCTTCCCCCCCGCATCCCGCACCCGGAAGCGGCGGCAGGCGGCCCATCGGCT GTGCAGCCGCAGCAAGTTGTCCCGATTAA |