© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|3083 |
| Gene name | |
| Location | Contig_1789:3457..4897 |
| Strand | - |
| Gene length (bp) | 1440 |
| Transcript length (bp) | 1440 |
| Coding sequence length (bp) | 1440 |
| Protein length (aa) | 480 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF17667 | Pkinase_fungal | Fungal protein kinase | 1.2E-117 | 1 | 371 |
| PF00069 | Pkinase | Protein kinase domain | 8.7E-08 | 284 | 362 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004672 | protein kinase activity | Yes |
| GO:0005524 | ATP binding | Yes |
| GO:0006468 | protein phosphorylation | Yes |
| GO:0036094 | small molecule binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0043412 | macromolecule modification | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0008152 | metabolic process | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0009987 | cellular process | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0016301 | kinase activity | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0006793 | phosphorus metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0005488 | binding | No |
| GO:0019538 | protein metabolic process | No |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0008150 | biological_process | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0036211 | protein modification process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0016310 | phosphorylation | No |
| GO:0003674 | molecular_function | No |
| GO:0006796 | phosphate-containing compound metabolic process | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0016740 | transferase activity | No |
| GO:0043168 | anion binding | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0000166 | nucleotide binding | No |
| GO:0016773 | phosphotransferase activity, alcohol group as acceptor | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0043167 | ion binding | No |
| GO:0044238 | primary metabolic process | No |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.1766 | 0.926 | 0.5322 | 0.0246 | 0.0638 | 0.0027 | 0.0246 | 0.0101 | 0.0048 | 0.0154 |
| Orthofinder run ID | 4 |
| Orthogroup | 58 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3083 MEVWVFDRSGCYSPGAFNIHEKPERFIQVIAGYTMMNDEELGLDTFTERDGDGPMIHIEQDGTSGRKRLHLESQP FTRQRAIVCRGTSCYLTKPPDSEDWSYVAKFSWTSDRRKPEADLLRLARQKGVEGIAELIGHRRITSINEMRSGL TFTNPYSFRGIPRPASTFSQSFSRSHLPRALSHSLSELPGLSIADKPSRKRQSVDVGQKSSKRSRSNSQRSSQRQ NEVTYDVEEAQGTSLLASNNGPYDNRVFRCLVISPAGRAIHKYEKKSELLGALRDAIKAHRSLYLKGNILHRDIS ENNIIITDRKATGHMGMLIDLDLAKELGSGRSGARCRTGTMEFMAIEVLQGISHTYRHDLESFFYVLLWLCSRRG WEFLRSQKEQPTPSLLTKWYSGSYREIAGAKRGYMHVDGFEDILEEFPQPEFDCVKPLCRELRGILFPYRDGLFV GTPKDPEILYGPIIQALDKAVDDIKMMER* |
| Coding | >Hirsu2|3083 ATGGAGGTTTGGGTATTTGACCGCTCGGGATGTTACAGTCCTGGCGCGTTCAATATTCATGAGAAGCCCGAACGG TTTATCCAGGTGATCGCCGGCTACACCATGATGAATGATGAAGAACTGGGCTTGGACACATTTACAGAACGGGAT GGCGACGGTCCCATGATACACATTGAGCAGGACGGGACCTCAGGCAGGAAGAGGCTGCACTTGGAGTCGCAGCCT TTCACCCGTCAACGGGCAATTGTCTGCCGTGGGACGTCTTGCTATCTCACGAAGCCTCCGGACTCTGAGGACTGG AGTTATGTGGCCAAGTTTTCGTGGACATCCGACAGGCGAAAGCCAGAGGCAGACCTTCTCAGATTGGCCCGTCAG AAAGGAGTCGAGGGCATTGCTGAGTTGATCGGCCACCGTCGCATAACCAGTATCAATGAGATGCGATCAGGCCTT ACATTTACGAACCCTTACTCCTTCCGAGGCATTCCAAGACCTGCGTCGACTTTTTCGCAGTCTTTCTCCCGATCT CATCTTCCCAGAGCCCTTTCTCACTCACTCAGCGAGCTTCCTGGTTTAAGCATCGCTGATAAGCCGTCAAGAAAG CGCCAATCGGTTGATGTCGGCCAGAAATCGTCTAAGCGATCAAGATCCAACAGTCAAAGGTCAAGCCAAAGGCAA AACGAGGTTACGTACGATGTGGAGGAAGCCCAAGGGACGAGTCTGCTCGCTTCCAATAACGGACCTTATGACAAT CGAGTTTTCCGATGTCTAGTTATCTCTCCAGCAGGTCGAGCGATCCACAAGTACGAAAAGAAATCGGAGCTCCTG GGGGCGCTCCGCGACGCCATCAAGGCACACAGGTCCCTATACCTCAAAGGCAACATCCTGCACCGGGACATTTCC GAGAACAACATCATTATAACAGACCGTAAGGCGACTGGGCACATGGGCATGCTGATCGACCTGGACCTTGCCAAG GAGCTTGGCAGCGGGCGCAGCGGTGCACGCTGTCGCACTGGCACGATGGAGTTCATGGCGATTGAGGTCCTACAA GGGATCTCTCACACGTACCGGCATGATCTGGAGTCGTTCTTCTATGTGCTCCTCTGGCTGTGTAGTCGTCGTGGC TGGGAATTTCTTCGCAGCCAGAAGGAGCAGCCTACACCAAGTCTGTTGACTAAGTGGTACTCCGGCAGCTATCGA GAGATTGCGGGCGCCAAACGAGGGTATATGCACGTTGATGGATTTGAAGATATCCTTGAGGAGTTCCCGCAACCA GAGTTCGACTGTGTCAAGCCTCTTTGCAGAGAGTTGCGGGGGATCTTGTTCCCTTACAGGGACGGGCTCTTTGTC GGTACACCGAAGGATCCGGAGATTCTCTATGGGCCAATTATCCAAGCGTTGGACAAGGCTGTTGATGATATCAAG ATGATGGAAAGATAA |
| Transcript | >Hirsu2|3083 ATGGAGGTTTGGGTATTTGACCGCTCGGGATGTTACAGTCCTGGCGCGTTCAATATTCATGAGAAGCCCGAACGG TTTATCCAGGTGATCGCCGGCTACACCATGATGAATGATGAAGAACTGGGCTTGGACACATTTACAGAACGGGAT GGCGACGGTCCCATGATACACATTGAGCAGGACGGGACCTCAGGCAGGAAGAGGCTGCACTTGGAGTCGCAGCCT TTCACCCGTCAACGGGCAATTGTCTGCCGTGGGACGTCTTGCTATCTCACGAAGCCTCCGGACTCTGAGGACTGG AGTTATGTGGCCAAGTTTTCGTGGACATCCGACAGGCGAAAGCCAGAGGCAGACCTTCTCAGATTGGCCCGTCAG AAAGGAGTCGAGGGCATTGCTGAGTTGATCGGCCACCGTCGCATAACCAGTATCAATGAGATGCGATCAGGCCTT ACATTTACGAACCCTTACTCCTTCCGAGGCATTCCAAGACCTGCGTCGACTTTTTCGCAGTCTTTCTCCCGATCT CATCTTCCCAGAGCCCTTTCTCACTCACTCAGCGAGCTTCCTGGTTTAAGCATCGCTGATAAGCCGTCAAGAAAG CGCCAATCGGTTGATGTCGGCCAGAAATCGTCTAAGCGATCAAGATCCAACAGTCAAAGGTCAAGCCAAAGGCAA AACGAGGTTACGTACGATGTGGAGGAAGCCCAAGGGACGAGTCTGCTCGCTTCCAATAACGGACCTTATGACAAT CGAGTTTTCCGATGTCTAGTTATCTCTCCAGCAGGTCGAGCGATCCACAAGTACGAAAAGAAATCGGAGCTCCTG GGGGCGCTCCGCGACGCCATCAAGGCACACAGGTCCCTATACCTCAAAGGCAACATCCTGCACCGGGACATTTCC GAGAACAACATCATTATAACAGACCGTAAGGCGACTGGGCACATGGGCATGCTGATCGACCTGGACCTTGCCAAG GAGCTTGGCAGCGGGCGCAGCGGTGCACGCTGTCGCACTGGCACGATGGAGTTCATGGCGATTGAGGTCCTACAA GGGATCTCTCACACGTACCGGCATGATCTGGAGTCGTTCTTCTATGTGCTCCTCTGGCTGTGTAGTCGTCGTGGC TGGGAATTTCTTCGCAGCCAGAAGGAGCAGCCTACACCAAGTCTGTTGACTAAGTGGTACTCCGGCAGCTATCGA GAGATTGCGGGCGCCAAACGAGGGTATATGCACGTTGATGGATTTGAAGATATCCTTGAGGAGTTCCCGCAACCA GAGTTCGACTGTGTCAAGCCTCTTTGCAGAGAGTTGCGGGGGATCTTGTTCCCTTACAGGGACGGGCTCTTTGTC GGTACACCGAAGGATCCGGAGATTCTCTATGGGCCAATTATCCAAGCGTTGGACAAGGCTGTTGATGATATCAAG ATGATGGAAAGATAA |
| Gene | >Hirsu2|3083 ATGGAGGTTTGGGTATTTGACCGCTCGGGATGTTACAGTCCTGGCGCGTTCAATATTCATGAGAAGCCCGAACGG TTTATCCAGGTGATCGCCGGCTACACCATGATGAATGATGAAGAACTGGGCTTGGACACATTTACAGAACGGGAT GGCGACGGTCCCATGATACACATTGAGCAGGACGGGACCTCAGGCAGGAAGAGGCTGCACTTGGAGTCGCAGCCT TTCACCCGTCAACGGGCAATTGTCTGCCGTGGGACGTCTTGCTATCTCACGAAGCCTCCGGACTCTGAGGACTGG AGTTATGTGGCCAAGTTTTCGTGGACATCCGACAGGCGAAAGCCAGAGGCAGACCTTCTCAGATTGGCCCGTCAG AAAGGAGTCGAGGGCATTGCTGAGTTGATCGGCCACCGTCGCATAACCAGTATCAATGAGATGCGATCAGGCCTT ACATTTACGAACCCTTACTCCTTCCGAGGCATTCCAAGACCTGCGTCGACTTTTTCGCAGTCTTTCTCCCGATCT CATCTTCCCAGAGCCCTTTCTCACTCACTCAGCGAGCTTCCTGGTTTAAGCATCGCTGATAAGCCGTCAAGAAAG CGCCAATCGGTTGATGTCGGCCAGAAATCGTCTAAGCGATCAAGATCCAACAGTCAAAGGTCAAGCCAAAGGCAA AACGAGGTTACGTACGATGTGGAGGAAGCCCAAGGGACGAGTCTGCTCGCTTCCAATAACGGACCTTATGACAAT CGAGTTTTCCGATGTCTAGTTATCTCTCCAGCAGGTCGAGCGATCCACAAGTACGAAAAGAAATCGGAGCTCCTG GGGGCGCTCCGCGACGCCATCAAGGCACACAGGTCCCTATACCTCAAAGGCAACATCCTGCACCGGGACATTTCC GAGAACAACATCATTATAACAGACCGTAAGGCGACTGGGCACATGGGCATGCTGATCGACCTGGACCTTGCCAAG GAGCTTGGCAGCGGGCGCAGCGGTGCACGCTGTCGCACTGGCACGATGGAGTTCATGGCGATTGAGGTCCTACAA GGGATCTCTCACACGTACCGGCATGATCTGGAGTCGTTCTTCTATGTGCTCCTCTGGCTGTGTAGTCGTCGTGGC TGGGAATTTCTTCGCAGCCAGAAGGAGCAGCCTACACCAAGTCTGTTGACTAAGTGGTACTCCGGCAGCTATCGA GAGATTGCGGGCGCCAAACGAGGGTATATGCACGTTGATGGATTTGAAGATATCCTTGAGGAGTTCCCGCAACCA GAGTTCGACTGTGTCAAGCCTCTTTGCAGAGAGTTGCGGGGGATCTTGTTCCCTTACAGGGACGGGCTCTTTGTC GGTACACCGAAGGATCCGGAGATTCTCTATGGGCCAATTATCCAAGCGTTGGACAAGGCTGTTGATGATATCAAG ATGATGGAAAGATAA |