Protein ID | Hirsu2|3079 |
Gene name | |
Location | Contig_1787:30..333 |
Strand | - |
Gene length (bp) | 303 |
Transcript length (bp) | 303 |
Coding sequence length (bp) | 303 |
Protein length (aa) | 101 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular|Endoplasmic reticulum | Signal peptide | 0.1288 | 0.1259 | 0.6919 | 0.1105 | 0.0908 | 0.0498 | 0.7751 | 0.4886 | 0.4389 | 0.0089 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 26 | 19 |
Orthofinder run ID | 4 |
Orthogroup | 9247 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps subramaniannii | Hirsu2|3079 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3079 MARRQHLALTLLLTLVLFFSISYIYSSPDSASAREAARLLDKVRPRPQPAPAGADADHEPDAHDHSGSGFGFGLG NLGGLTDGLLGGESIAPKLENATLK* |
Coding | >Hirsu2|3079 ATGGCACGCCGCCAGCATCTCGCCCTGACGCTGCTCCTCACCCTCGTCCTCTTCTTCAGCATCTCCTACATCTAC TCGAGCCCCGACTCGGCGTCGGCGCGCGAGGCCGCCCGCCTGCTGGACAAGGTCCGGCCGAGGCCGCAGCCGGCG CCGGCCGGCGCCGACGCGGACCATGAGCCGGATGCCCACGACCACTCCGGCTCGGGCTTCGGCTTCGGCCTCGGC AACCTGGGCGGCCTCACCGACGGGCTGCTGGGAGGAGAGTCGATCGCGCCGAAGCTGGAGAACGCGACGCTGAAG TGA |
Transcript | >Hirsu2|3079 ATGGCACGCCGCCAGCATCTCGCCCTGACGCTGCTCCTCACCCTCGTCCTCTTCTTCAGCATCTCCTACATCTAC TCGAGCCCCGACTCGGCGTCGGCGCGCGAGGCCGCCCGCCTGCTGGACAAGGTCCGGCCGAGGCCGCAGCCGGCG CCGGCCGGCGCCGACGCGGACCATGAGCCGGATGCCCACGACCACTCCGGCTCGGGCTTCGGCTTCGGCCTCGGC AACCTGGGCGGCCTCACCGACGGGCTGCTGGGAGGAGAGTCGATCGCGCCGAAGCTGGAGAACGCGACGCTGAAG TGA |
Gene | >Hirsu2|3079 ATGGCACGCCGCCAGCATCTCGCCCTGACGCTGCTCCTCACCCTCGTCCTCTTCTTCAGCATCTCCTACATCTAC TCGAGCCCCGACTCGGCGTCGGCGCGCGAGGCCGCCCGCCTGCTGGACAAGGTCCGGCCGAGGCCGCAGCCGGCG CCGGCCGGCGCCGACGCGGACCATGAGCCGGATGCCCACGACCACTCCGGCTCGGGCTTCGGCTTCGGCCTCGGC AACCTGGGCGGCCTCACCGACGGGCTGCTGGGAGGAGAGTCGATCGCGCCGAAGCTGGAGAACGCGACGCTGAAG TGA |