© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3069 |
| Gene name | |
| Location | Contig_1782:3111..4652 |
| Strand | - |
| Gene length (bp) | 1541 |
| Transcript length (bp) | 1398 |
| Coding sequence length (bp) | 1398 |
| Protein length (aa) | 466 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF14378 | PAP2_3 | PAP2 superfamily | 1.1E-23 | 169 | 347 |
| PF01569 | PAP2 | PAP2 superfamily | 2.2E-08 | 238 | 349 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10142|AUR1_SCHPO | Inositol phosphorylceramide synthase catalytic subunit aur1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=aur1 PE=1 SV=1 | 24 | 376 | 6.0E-103 |
| sp|O13332|AUR1_CANAL | Inositol phosphorylceramide synthase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=AUR1 PE=1 SV=2 | 54 | 371 | 6.0E-95 |
| sp|P36107|AUR1_YEAST | Inositol phosphorylceramide synthase catalytic subunit AUR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AUR1 PE=1 SV=1 | 44 | 371 | 2.0E-87 |
| sp|P38954|IPT1_YEAST | Inositolphosphotransferase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IPT1 PE=1 SV=2 | 182 | 302 | 9.0E-17 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 37 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 32 | 17 |
| 2 | 82 | 104 | 22 |
| 3 | 124 | 146 | 22 |
| 4 | 153 | 175 | 22 |
| 5 | 185 | 207 | 22 |
| 6 | 214 | 233 | 19 |
| 7 | 266 | 288 | 22 |
| 8 | 300 | 322 | 22 |
| 9 | 332 | 354 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3069 MADLPGSLPGKPVLPSLWTDSIALAVLNRLPARYHAARRRSRSNARPMRGHGSADITSLQRSFSLWDGVRDLARR RWHPADLQYLFLAGLALFSLSIAPSAPVVKTLALVGAACILLMPATRQFFLPSVTIWVWLVYFFCSRFIPYEYRP HIWVRVLPALENVLYGANLSNILSAHQHAVLDILAWLPYGIIHFGAPAVCSLLMFVFGAPGTTAVFARTFGWMSI VGVTIQLVFPCTPPWYENEHGLVPATYGMSGSPAGLARIDAIFGIDLYTTNFTAAPLPFGAFPSLHGGYAVLEAL FMSHCFPQFKVFFIGYAGWIWWSTMYLSHHYAIDLVGGGLIAMAFFYSARARWLPRRQPDKMTRWDYDYVEIGHR LRPADEEFGAGPGLGHYTALGLFSHRRAGSSDGWTIGSSSSYSSSSGTVSPTSSDSSPGVLVMDMESNGQLWDGH GSPRDVELSEVVILR* |
| Coding | >Hirsu2|3069 ATGGCAGACCTCCCGGGCTCGCTCCCGGGGAAGCCGGTGCTTCCGTCGCTGTGGACGGACAGCATCGCGCTCGCC GTCCTCAACCGCCTGCCCGCCCGCTACCACGCCGCCCGCCGCCGTAGCCGCTCCAACGCCCGGCCGATGCGCGGC CACGGCAGCGCCGACATCACCAGCCTGCAGCGCTCCTTTAGCCTCTGGGACGGCGTGCGCGACCTGGCCCGCCGC CGCTGGCATCCCGCCGACCTGCAGTACCTCTTCCTCGCCGGCCTGGCCCTGTTCTCGCTGTCGATTGCGCCCTCG GCCCCGGTCGTCAAGACGCTGGCCCTGGTCGGCGCCGCCTGCATCCTGCTCATGCCCGCCACCCGCCAATTCTTC TTGCCCTCCGTCACCATCTGGGTCTGGCTCGTCTACTTCTTCTGCAGCCGCTTCATCCCCTACGAATACCGCCCG CACATCTGGGTCCGGGTGCTGCCGGCGCTGGAGAACGTGCTGTACGGCGCCAACCTGTCCAACATCCTGTCGGCG CACCAGCACGCCGTGCTCGACATCCTGGCCTGGCTGCCGTACGGCATCATCCACTTCGGCGCGCCGGCCGTCTGC TCGCTGCTCATGTTCGTCTTCGGCGCGCCCGGCACGACGGCCGTCTTCGCCCGCACCTTTGGCTGGATGAGCATC GTCGGCGTCACCATCCAGCTCGTCTTCCCCTGCACGCCGCCGTGGTACGAGAACGAGCACGGCCTGGTGCCGGCG ACGTACGGCATGTCGGGCTCGCCCGCCGGGCTGGCGCGCATCGACGCCATCTTCGGCATCGACCTCTACACGACC AATTTCACGGCCGCGCCGCTGCCCTTTGGCGCCTTCCCGTCGCTGCACGGCGGCTACGCCGTGCTCGAGGCCCTC TTCATGAGCCACTGCTTCCCGCAGTTCAAGGTCTTCTTCATCGGCTACGCCGGCTGGATCTGGTGGTCGACCATG TACCTGAGCCACCACTACGCCATCGACCTGGTCGGCGGCGGCCTCATCGCCATGGCCTTCTTCTACTCGGCCCGC GCCCGCTGGCTGCCGCGCCGCCAGCCCGACAAGATGACGCGCTGGGACTACGACTACGTCGAGATCGGCCACCGC CTGCGCCCCGCCGACGAGGAGTTCGGCGCCGGGCCCGGCCTCGGCCACTACACGGCCCTCGGCCTCTTCAGCCAC CGCCGCGCCGGCTCCAGCGACGGCTGGACCATCGGCAGCAGCTCCAGCTACAGCTCCAGCAGCGGCACCGTCAGC CCGACCTCGTCCGACAGCTCGCCCGGCGTGCTGGTCATGGACATGGAGAGCAACGGCCAGCTGTGGGACGGCCAC GGCTCGCCCCGCGACGTCGAATTGAGCGAGGTCGTCATCCTGCGGTGA |
| Transcript | >Hirsu2|3069 ATGGCAGACCTCCCGGGCTCGCTCCCGGGGAAGCCGGTGCTTCCGTCGCTGTGGACGGACAGCATCGCGCTCGCC GTCCTCAACCGCCTGCCCGCCCGCTACCACGCCGCCCGCCGCCGTAGCCGCTCCAACGCCCGGCCGATGCGCGGC CACGGCAGCGCCGACATCACCAGCCTGCAGCGCTCCTTTAGCCTCTGGGACGGCGTGCGCGACCTGGCCCGCCGC CGCTGGCATCCCGCCGACCTGCAGTACCTCTTCCTCGCCGGCCTGGCCCTGTTCTCGCTGTCGATTGCGCCCTCG GCCCCGGTCGTCAAGACGCTGGCCCTGGTCGGCGCCGCCTGCATCCTGCTCATGCCCGCCACCCGCCAATTCTTC TTGCCCTCCGTCACCATCTGGGTCTGGCTCGTCTACTTCTTCTGCAGCCGCTTCATCCCCTACGAATACCGCCCG CACATCTGGGTCCGGGTGCTGCCGGCGCTGGAGAACGTGCTGTACGGCGCCAACCTGTCCAACATCCTGTCGGCG CACCAGCACGCCGTGCTCGACATCCTGGCCTGGCTGCCGTACGGCATCATCCACTTCGGCGCGCCGGCCGTCTGC TCGCTGCTCATGTTCGTCTTCGGCGCGCCCGGCACGACGGCCGTCTTCGCCCGCACCTTTGGCTGGATGAGCATC GTCGGCGTCACCATCCAGCTCGTCTTCCCCTGCACGCCGCCGTGGTACGAGAACGAGCACGGCCTGGTGCCGGCG ACGTACGGCATGTCGGGCTCGCCCGCCGGGCTGGCGCGCATCGACGCCATCTTCGGCATCGACCTCTACACGACC AATTTCACGGCCGCGCCGCTGCCCTTTGGCGCCTTCCCGTCGCTGCACGGCGGCTACGCCGTGCTCGAGGCCCTC TTCATGAGCCACTGCTTCCCGCAGTTCAAGGTCTTCTTCATCGGCTACGCCGGCTGGATCTGGTGGTCGACCATG TACCTGAGCCACCACTACGCCATCGACCTGGTCGGCGGCGGCCTCATCGCCATGGCCTTCTTCTACTCGGCCCGC GCCCGCTGGCTGCCGCGCCGCCAGCCCGACAAGATGACGCGCTGGGACTACGACTACGTCGAGATCGGCCACCGC CTGCGCCCCGCCGACGAGGAGTTCGGCGCCGGGCCCGGCCTCGGCCACTACACGGCCCTCGGCCTCTTCAGCCAC CGCCGCGCCGGCTCCAGCGACGGCTGGACCATCGGCAGCAGCTCCAGCTACAGCTCCAGCAGCGGCACCGTCAGC CCGACCTCGTCCGACAGCTCGCCCGGCGTGCTGGTCATGGACATGGAGAGCAACGGCCAGCTGTGGGACGGCCAC GGCTCGCCCCGCGACGTCGAATTGAGCGAGGTCGTCATCCTGCGGTGA |
| Gene | >Hirsu2|3069 ATGGCAGACCTCCCGGGCTCGCTCCCGGGGAAGCCGGTGCTTCCGTCGCTGTGGACGGACAGCATCGCGCTCGCC GTCCTCAACCGCCTGCCCGCCCGCTACCACGCCGCCCGCCGCCGTAGCCGCTCCAACGCCCGGCCGATGCGCGGC CACGGCAGCGCCGACATCACCAGCCTGCAGCGCTCCTTTAGCCTCTGGGACGGCGTGCGCGACCTGGCCCGCCGC CGCTGGCATCCCGCCGACCTGCAGTACCTCTTCCTCGCCGGCCTGGCCCTGTTCTCGCTGTCGATTGCGCCCTCG GCCCCGGTCGTCAAGACGCTGGCCCTGGTCGGCGCCGCCTGCATCCTGCTCATGCCCGCCACCCGCCAATTCTTC TTGCCCTCCGTCACCATCTGGGTCTGGCTCGTCTACTTCTTCTGCAGCCGGTGAGTGTGTGGGCCCGGCGGGCGA ACGATCCGGGGAAGACCCCGGTCTCCCCGCTTCACGAAGCTTTCCCTCCTCTCCCTTCTCTCTCGACCTCTCTCA CACGTCGTCGCCATGAGCGCTCGCGCTAACCGGTCCGGCGCAGCTTCATCCCCTACGAATACCGCCCGCACATCT GGGTCCGGGTGCTGCCGGCGCTGGAGAACGTGCTGTACGGCGCCAACCTGTCCAACATCCTGTCGGCGCACCAGC ACGCCGTGCTCGACATCCTGGCCTGGCTGCCGTACGGCATCATCCACTTCGGCGCGCCGGCCGTCTGCTCGCTGC TCATGTTCGTCTTCGGCGCGCCCGGCACGACGGCCGTCTTCGCCCGCACCTTTGGCTGGATGAGCATCGTCGGCG TCACCATCCAGCTCGTCTTCCCCTGCACGCCGCCGTGGTACGAGAACGAGCACGGCCTGGTGCCGGCGACGTACG GCATGTCGGGCTCGCCCGCCGGGCTGGCGCGCATCGACGCCATCTTCGGCATCGACCTCTACACGACCAATTTCA CGGCCGCGCCGCTGCCCTTTGGCGCCTTCCCGTCGCTGCACGGCGGCTACGCCGTGCTCGAGGCCCTCTTCATGA GCCACTGCTTCCCGCAGTTCAAGGTCTTCTTCATCGGCTACGCCGGCTGGATCTGGTGGTCGACCATGTACCTGA GCCACCACTACGCCATCGACCTGGTCGGCGGCGGCCTCATCGCCATGGCCTTCTTCTACTCGGCCCGCGCCCGCT GGCTGCCGCGCCGCCAGCCCGACAAGATGACGCGCTGGGACTACGACTACGTCGAGATCGGCCACCGCCTGCGCC CCGCCGACGAGGAGTTCGGCGCCGGGCCCGGCCTCGGCCACTACACGGCCCTCGGCCTCTTCAGCCACCGCCGCG CCGGCTCCAGCGACGGCTGGACCATCGGCAGCAGCTCCAGCTACAGCTCCAGCAGCGGCACCGTCAGCCCGACCT CGTCCGACAGCTCGCCCGGCGTGCTGGTCATGGACATGGAGAGCAACGGCCAGCTGTGGGACGGCCACGGCTCGC CCCGCGACGTCGAATTGAGCGAGGTCGTCATCCTGCGGTGA |