Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3067
Gene name
LocationContig_1781:3245..4854
Strand-
Gene length (bp)1609
Transcript length (bp)1503
Coding sequence length (bp)1503
Protein length (aa) 501

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 5.8E-32 57 426

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 25 500 1.0E-79
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 37 480 5.0E-73
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 40 486 2.0E-72
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 27 498 6.0E-66
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 37 500 7.0E-54
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Swissprot ID Swissprot Description Start End E-value
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 25 500 1.0E-79
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 37 480 5.0E-73
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 40 486 2.0E-72
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 27 498 6.0E-66
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 37 500 7.0E-54
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 37 429 1.0E-37
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 37 500 5.0E-35
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 23 500 9.0E-35
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 40 369 2.0E-34
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 37 347 4.0E-33
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 19 359 5.0E-32
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 21 397 4.0E-30
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 37 500 1.0E-29
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 38 458 3.0E-27
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 45 307 1.0E-26
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 40 491 2.0E-26
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 8 257 1.0E-25
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 42 471 1.0E-23
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 25 487 1.0E-23
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 26 350 2.0E-20
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 42 470 7.0E-20
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 43 496 4.0E-18
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 31 472 4.0E-18
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 30 290 8.0E-16
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 30 495 1.0E-14
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 44 250 2.0E-11
sp|P0AA76|DGOT_ECOLI D-galactonate transporter OS=Escherichia coli (strain K12) GN=dgoT PE=1 SV=1 58 254 7.0E-11
sp|P0AA77|DGOT_ECOL6 D-galactonate transporter OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=dgoT PE=3 SV=1 58 254 7.0E-11
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 125 284 7.0E-09
sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 59 474 1.0E-06
sp|P39398|LGOT_ECOLI Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 26 372 8.0E-06
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0031224 intrinsic component of membrane No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0051179 localization No
GO:0051234 establishment of localization No
GO:0044425 membrane part No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.5

Transmembrane Domains

Domain # Start End Length
1 51 70 19
2 90 112 22
3 119 141 22
4 146 168 22
5 180 202 22
6 212 234 22
7 287 309 22
8 319 341 22
9 348 367 19
10 377 396 19
11 409 431 22
12 441 463 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3067
MSPAGGEKRAAEVTGVVPVPSGSGTTSAADSDAAPGIDPEAERRLVAKLDLIIYPAFFIIYTMSFLDRINIGNAR
IQGMVEDLDLHGGRFNIALFAYFVSYILLEVPSNMVIRRVRPSLYLSALMFGWGVVNMAMGLVRSYGALVALRLL
LGVFEAGVLPGIIYVTSVYYRRHEYQKRMSFFFCSTVVAGAFGGLLAYAIASRLGGAAGVAAWRWIFLVEGGATA
VLALVAAFVVIDWPEQTRYLSPAEKELLRRRLAADGADGCRMDTLDRFALGLILSDYKIWLGAVAYMGIGVAGYA
GVFFLPTILFEFRWAAEEAQVRTVPVYAFAAGLMLLAAWASDRLRHRFAFILAGVSLATVGYAMLLAQDGRSRDF
KFAAVFLVFGGAYTAIPMVLGWLQNNLSGHWKRAFGSSIQVTIGNLAGIVGSNIFLDHERPAYRTGYGVAAAMMW
LGALAALAMCLLMRRENQKRAAGERDDRLRMPAERRRNMGDWHPSFRFTL*
Coding >Hirsu2|3067
ATGTCGCCGGCCGGCGGAGAGAAGAGGGCGGCGGAGGTGACGGGCGTGGTGCCGGTGCCGTCCGGGTCCGGCACC
ACCTCGGCCGCCGACTCGGACGCGGCGCCCGGCATCGACCCCGAGGCCGAGCGCCGGCTGGTGGCCAAGCTGGAC
CTGATCATCTACCCGGCCTTCTTCATCATCTACACCATGTCCTTCCTGGACCGCATCAACATCGGCAACGCCCGG
ATCCAGGGCATGGTCGAGGACCTGGACCTGCACGGCGGCCGCTTCAACATTGCCCTCTTCGCCTACTTCGTCTCC
TACATCCTGCTCGAGGTGCCGTCCAACATGGTGATCCGGCGCGTGCGGCCGTCGCTCTACCTCTCGGCCCTCATG
TTCGGCTGGGGCGTGGTCAACATGGCGATGGGCCTGGTGCGGTCGTACGGCGCGCTCGTCGCGCTGCGGCTGCTG
CTGGGCGTCTTCGAGGCCGGCGTGCTGCCGGGCATCATCTACGTCACGTCCGTCTACTACCGGCGGCACGAGTAC
CAGAAGCGCATGTCCTTCTTCTTCTGCAGCACCGTCGTGGCCGGCGCCTTCGGCGGCCTGCTGGCCTACGCCATC
GCCTCGCGCCTCGGCGGCGCCGCCGGCGTCGCCGCCTGGCGCTGGATCTTCCTGGTCGAGGGCGGCGCGACGGCG
GTGCTGGCCCTCGTCGCCGCCTTCGTCGTCATCGACTGGCCCGAGCAGACGCGCTACCTGTCGCCGGCCGAGAAG
GAGCTGCTCCGGCGCCGGCTGGCCGCCGACGGCGCCGACGGCTGCCGCATGGACACGCTCGACCGCTTCGCCCTC
GGCCTGATCCTGTCCGACTACAAGATCTGGCTGGGCGCCGTCGCCTACATGGGCATCGGCGTCGCCGGCTACGCC
GGCGTCTTCTTCCTGCCCACCATCCTCTTCGAGTTCCGCTGGGCGGCCGAGGAGGCCCAGGTCCGGACCGTGCCC
GTCTACGCCTTCGCCGCCGGCCTCATGCTGCTGGCCGCCTGGGCCTCGGACCGCCTGCGCCACCGCTTCGCCTTC
ATCCTCGCCGGCGTCAGCCTCGCCACCGTCGGCTACGCCATGCTGCTGGCCCAGGACGGCCGCTCGCGCGACTTC
AAGTTCGCCGCCGTCTTCCTCGTCTTCGGCGGCGCCTACACCGCCATCCCCATGGTCCTCGGCTGGCTGCAGAAC
AACCTGTCGGGCCACTGGAAGCGCGCCTTCGGCTCCTCCATCCAGGTCACCATCGGCAACCTGGCCGGCATCGTC
GGCAGCAACATCTTCCTCGACCACGAGCGGCCCGCCTACCGCACCGGCTATGGCGTCGCCGCCGCCATGATGTGG
CTCGGCGCCCTGGCCGCCCTGGCCATGTGCCTGCTGATGCGGAGGGAGAACCAGAAGCGGGCCGCCGGCGAGCGC
GACGACCGCCTCCGCATGCCCGCCGAGCGTCGCCGCAACATGGGCGACTGGCACCCGAGCTTCCGCTTCACGCTC
TGA
Transcript >Hirsu2|3067
ATGTCGCCGGCCGGCGGAGAGAAGAGGGCGGCGGAGGTGACGGGCGTGGTGCCGGTGCCGTCCGGGTCCGGCACC
ACCTCGGCCGCCGACTCGGACGCGGCGCCCGGCATCGACCCCGAGGCCGAGCGCCGGCTGGTGGCCAAGCTGGAC
CTGATCATCTACCCGGCCTTCTTCATCATCTACACCATGTCCTTCCTGGACCGCATCAACATCGGCAACGCCCGG
ATCCAGGGCATGGTCGAGGACCTGGACCTGCACGGCGGCCGCTTCAACATTGCCCTCTTCGCCTACTTCGTCTCC
TACATCCTGCTCGAGGTGCCGTCCAACATGGTGATCCGGCGCGTGCGGCCGTCGCTCTACCTCTCGGCCCTCATG
TTCGGCTGGGGCGTGGTCAACATGGCGATGGGCCTGGTGCGGTCGTACGGCGCGCTCGTCGCGCTGCGGCTGCTG
CTGGGCGTCTTCGAGGCCGGCGTGCTGCCGGGCATCATCTACGTCACGTCCGTCTACTACCGGCGGCACGAGTAC
CAGAAGCGCATGTCCTTCTTCTTCTGCAGCACCGTCGTGGCCGGCGCCTTCGGCGGCCTGCTGGCCTACGCCATC
GCCTCGCGCCTCGGCGGCGCCGCCGGCGTCGCCGCCTGGCGCTGGATCTTCCTGGTCGAGGGCGGCGCGACGGCG
GTGCTGGCCCTCGTCGCCGCCTTCGTCGTCATCGACTGGCCCGAGCAGACGCGCTACCTGTCGCCGGCCGAGAAG
GAGCTGCTCCGGCGCCGGCTGGCCGCCGACGGCGCCGACGGCTGCCGCATGGACACGCTCGACCGCTTCGCCCTC
GGCCTGATCCTGTCCGACTACAAGATCTGGCTGGGCGCCGTCGCCTACATGGGCATCGGCGTCGCCGGCTACGCC
GGCGTCTTCTTCCTGCCCACCATCCTCTTCGAGTTCCGCTGGGCGGCCGAGGAGGCCCAGGTCCGGACCGTGCCC
GTCTACGCCTTCGCCGCCGGCCTCATGCTGCTGGCCGCCTGGGCCTCGGACCGCCTGCGCCACCGCTTCGCCTTC
ATCCTCGCCGGCGTCAGCCTCGCCACCGTCGGCTACGCCATGCTGCTGGCCCAGGACGGCCGCTCGCGCGACTTC
AAGTTCGCCGCCGTCTTCCTCGTCTTCGGCGGCGCCTACACCGCCATCCCCATGGTCCTCGGCTGGCTGCAGAAC
AACCTGTCGGGCCACTGGAAGCGCGCCTTCGGCTCCTCCATCCAGGTCACCATCGGCAACCTGGCCGGCATCGTC
GGCAGCAACATCTTCCTCGACCACGAGCGGCCCGCCTACCGCACCGGCTATGGCGTCGCCGCCGCCATGATGTGG
CTCGGCGCCCTGGCCGCCCTGGCCATGTGCCTGCTGATGCGGAGGGAGAACCAGAAGCGGGCCGCCGGCGAGCGC
GACGACCGCCTCCGCATGCCCGCCGAGCGTCGCCGCAACATGGGCGACTGGCACCCGAGCTTCCGCTTCACGCTC
TGA
Gene >Hirsu2|3067
ATGTCGCCGGCCGGCGGAGAGAAGAGGGCGGCGGAGGTGACGGGCGTGGTGCCGGTGCCGTCCGGGTCCGGCACC
ACCTCGGCCGCCGACTCGGACGCGGCGCCCGGCATCGACCCCGAGGCCGAGCGCCGGCTGGTGGCCAAGCTGGAC
CTGATCATCTACCCGGCCTTCTTCATCATCTACACCATGTCCTTCCTGGACCGCATCAACATCGGCAACGCCCGG
ATCCAGGGCATGGTCGAGGACCTGGACCTGCACGGCGGCCGCTTCAACATTGCCCTCTTCGTACGTTGATCCTCT
TCTCCCTTTGACCACTTTGTTGGACAAGATGTTCCCGGTCGAGTTTGGCCAGCACGTTGGAAGGGGGGAGAGCTC
TGGTTGATGTGACAAGGCCTACTTCGTCTCCTACATCCTGCTCGAGGTGCCGTCCAACATGGTGATCCGGCGCGT
GCGGCCGTCGCTCTACCTCTCGGCCCTCATGTTCGGCTGGGGCGTGGTCAACATGGCGATGGGCCTGGTGCGGTC
GTACGGCGCGCTCGTCGCGCTGCGGCTGCTGCTGGGCGTCTTCGAGGCCGGCGTGCTGCCGGGCATCATCTACGT
CACGTCCGTCTACTACCGGCGGCACGAGTACCAGAAGCGCATGTCCTTCTTCTTCTGCAGCACCGTCGTGGCCGG
CGCCTTCGGCGGCCTGCTGGCCTACGCCATCGCCTCGCGCCTCGGCGGCGCCGCCGGCGTCGCCGCCTGGCGCTG
GATCTTCCTGGTCGAGGGCGGCGCGACGGCGGTGCTGGCCCTCGTCGCCGCCTTCGTCGTCATCGACTGGCCCGA
GCAGACGCGCTACCTGTCGCCGGCCGAGAAGGAGCTGCTCCGGCGCCGGCTGGCCGCCGACGGCGCCGACGGCTG
CCGCATGGACACGCTCGACCGCTTCGCCCTCGGCCTGATCCTGTCCGACTACAAGATCTGGCTGGGCGCCGTCGC
CTACATGGGCATCGGCGTCGCCGGCTACGCCGGCGTCTTCTTCCTGCCCACCATCCTCTTCGAGTTCCGCTGGGC
GGCCGAGGAGGCCCAGGTCCGGACCGTGCCCGTCTACGCCTTCGCCGCCGGCCTCATGCTGCTGGCCGCCTGGGC
CTCGGACCGCCTGCGCCACCGCTTCGCCTTCATCCTCGCCGGCGTCAGCCTCGCCACCGTCGGCTACGCCATGCT
GCTGGCCCAGGACGGCCGCTCGCGCGACTTCAAGTTCGCCGCCGTCTTCCTCGTCTTCGGCGGCGCCTACACCGC
CATCCCCATGGTCCTCGGCTGGCTGCAGAACAACCTGTCGGGCCACTGGAAGCGCGCCTTCGGCTCCTCCATCCA
GGTCACCATCGGCAACCTGGCCGGCATCGTCGGCAGCAACATCTTCCTCGACCACGAGCGGCCCGCCTACCGCAC
CGGCTATGGCGTCGCCGCCGCCATGATGTGGCTCGGCGCCCTGGCCGCCCTGGCCATGTGCCTGCTGATGCGGAG
GGAGAACCAGAAGCGGGCCGCCGGCGAGCGCGACGACCGCCTCCGCATGCCCGCCGAGCGTCGCCGCAACATGGG
CGACTGGCACCCGAGCTTCCGCTTCACGCTCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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