© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3062 |
| Gene name | |
| Location | Contig_178:25579..26663 |
| Strand | - |
| Gene length (bp) | 1084 |
| Transcript length (bp) | 987 |
| Coding sequence length (bp) | 987 |
| Protein length (aa) | 329 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9US27|LOA1_SCHPO | Putative lysophosphatidic acid:oleoyl-CoA acyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vps66 PE=3 SV=2 | 1 | 326 | 2.0E-13 |
| sp|Q06508|LOA1_YEAST | Lysophosphatidic acid:oleoyl-CoA acyltransferase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LOA1 PE=1 SV=1 | 1 | 197 | 3.0E-08 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 30 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 35 | 57 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3062 MEKYSQFRDRSTGIAPFLPVSTPLSAVSAVTHSLLFFFRLPFFLTYALAYFIIFHHLPLPVVARKMALWGMMAIP GIWWVDLQLDGVRRGTLSEQPRERVPHPGSVIAANFTSPIDAVYLAAVFDPVFTISYPGTRKLQRVCLLGAVTMA LSPVRTAPPPNAKLVDIEDLLEEYPNRVIAVFPECGTTNGKAILPFSPALAQCPAHVHVFPVSIRYAPSDVTTPV PGQWFKFLWNLLSRPTTCIRVRIAESRRKDAAAASTKSGSRTTNGAGGDPRQRKATDVEDPEQEKQFLDRIAEAL ARLSRVKRVGLTMNDKAAFIAALNGKKS* |
| Coding | >Hirsu2|3062 ATGGAGAAGTACAGCCAGTTTCGCGACAGATCCACCGGCATTGCGCCCTTCTTGCCCGTGTCGACGCCTCTGTCC GCCGTGTCGGCGGTGACGCACAGCCTGCTGTTCTTCTTCCGCCTCCCCTTCTTCCTCACCTACGCGCTCGCCTAC TTCATCATCTTCCACCATCTGCCGCTGCCCGTCGTTGCCCGCAAGATGGCGCTCTGGGGCATGATGGCCATCCCC GGCATCTGGTGGGTCGACCTCCAGCTTGACGGCGTCCGGCGCGGCACCCTCTCGGAGCAGCCGCGCGAGCGCGTC CCCCATCCGGGGTCGGTGATCGCTGCCAACTTCACCAGCCCCATCGACGCCGTCTACCTCGCCGCCGTCTTCGAC CCCGTCTTTACAATCTCGTATCCGGGCACGCGCAAGCTGCAGCGCGTGTGCCTGCTGGGCGCCGTCACCATGGCC CTCTCTCCGGTCCGGACGGCCCCGCCCCCCAACGCCAAACTGGTAGACATCGAGGATCTGCTCGAGGAGTATCCG AACCGGGTCATTGCCGTGTTCCCCGAGTGTGGCACCACCAACGGCAAAGCCATCTTGCCCTTCAGTCCGGCCTTG GCCCAGTGTCCGGCCCACGTGCACGTCTTTCCGGTCAGCATTCGATACGCGCCCTCCGATGTCACGACGCCGGTT CCCGGCCAGTGGTTCAAGTTCTTGTGGAATCTTCTGTCGCGTCCCACGACTTGCATCCGCGTGCGCATCGCCGAG AGTCGCCGAAAGGACGCGGCCGCCGCCTCCACCAAAAGCGGTTCCAGGACGACGAACGGTGCCGGCGGGGACCCG AGACAGCGAAAGGCGACGGATGTCGAGGATCCGGAGCAAGAGAAGCAGTTTCTGGATCGGATTGCCGAAGCTTTG GCGCGATTGAGTCGCGTCAAGAGGGTTGGCTTGACAATGAACGACAAAGCAGCGTTCATTGCGGCCCTGAATGGC AAGAAGTCGTGA |
| Transcript | >Hirsu2|3062 ATGGAGAAGTACAGCCAGTTTCGCGACAGATCCACCGGCATTGCGCCCTTCTTGCCCGTGTCGACGCCTCTGTCC GCCGTGTCGGCGGTGACGCACAGCCTGCTGTTCTTCTTCCGCCTCCCCTTCTTCCTCACCTACGCGCTCGCCTAC TTCATCATCTTCCACCATCTGCCGCTGCCCGTCGTTGCCCGCAAGATGGCGCTCTGGGGCATGATGGCCATCCCC GGCATCTGGTGGGTCGACCTCCAGCTTGACGGCGTCCGGCGCGGCACCCTCTCGGAGCAGCCGCGCGAGCGCGTC CCCCATCCGGGGTCGGTGATCGCTGCCAACTTCACCAGCCCCATCGACGCCGTCTACCTCGCCGCCGTCTTCGAC CCCGTCTTTACAATCTCGTATCCGGGCACGCGCAAGCTGCAGCGCGTGTGCCTGCTGGGCGCCGTCACCATGGCC CTCTCTCCGGTCCGGACGGCCCCGCCCCCCAACGCCAAACTGGTAGACATCGAGGATCTGCTCGAGGAGTATCCG AACCGGGTCATTGCCGTGTTCCCCGAGTGTGGCACCACCAACGGCAAAGCCATCTTGCCCTTCAGTCCGGCCTTG GCCCAGTGTCCGGCCCACGTGCACGTCTTTCCGGTCAGCATTCGATACGCGCCCTCCGATGTCACGACGCCGGTT CCCGGCCAGTGGTTCAAGTTCTTGTGGAATCTTCTGTCGCGTCCCACGACTTGCATCCGCGTGCGCATCGCCGAG AGTCGCCGAAAGGACGCGGCCGCCGCCTCCACCAAAAGCGGTTCCAGGACGACGAACGGTGCCGGCGGGGACCCG AGACAGCGAAAGGCGACGGATGTCGAGGATCCGGAGCAAGAGAAGCAGTTTCTGGATCGGATTGCCGAAGCTTTG GCGCGATTGAGTCGCGTCAAGAGGGTTGGCTTGACAATGAACGACAAAGCAGCGTTCATTGCGGCCCTGAATGGC AAGAAGTCGTGA |
| Gene | >Hirsu2|3062 ATGGAGAAGTACAGCCAGTTTCGCGACAGATGTAAGGGTCGTCACGTTCCGCGAGGCAGAGAAGCCCGTACCAGT CTGCCACCCCTCGCGAACACCGTCCGCCTGCTTACTTGTGCGCCTACTTCTAGCCACCGGCATTGCGCCCTTCTT GCCCGTGTCGACGCCTCTGTCCGCCGTGTCGGCGGTGACGCACAGCCTGCTGTTCTTCTTCCGCCTCCCCTTCTT CCTCACCTACGCGCTCGCCTACTTCATCATCTTCCACCATCTGCCGCTGCCCGTCGTTGCCCGCAAGATGGCGCT CTGGGGCATGATGGCCATCCCCGGCATCTGGTGGGTCGACCTCCAGCTTGACGGCGTCCGGCGCGGCACCCTCTC GGAGCAGCCGCGCGAGCGCGTCCCCCATCCGGGGTCGGTGATCGCTGCCAACTTCACCAGCCCCATCGACGCCGT CTACCTCGCCGCCGTCTTCGACCCCGTCTTTACAATCTCGTATCCGGGCACGCGCAAGCTGCAGCGCGTGTGCCT GCTGGGCGCCGTCACCATGGCCCTCTCTCCGGTCCGGACGGCCCCGCCCCCCAACGCCAAACTGGTAGACATCGA GGATCTGCTCGAGGAGTATCCGAACCGGGTCATTGCCGTGTTCCCCGAGTGTGGCACCACCAACGGCAAAGCCAT CTTGCCCTTCAGTCCGGCCTTGGCCCAGTGTCCGGCCCACGTGCACGTCTTTCCGGTCAGCATTCGATACGCGCC CTCCGATGTCACGACGCCGGTTCCCGGCCAGTGGTTCAAGTTCTTGTGGAATCTTCTGTCGCGTCCCACGACTTG CATCCGCGTGCGCATCGCCGAGAGTCGCCGAAAGGACGCGGCCGCCGCCTCCACCAAAAGCGGTTCCAGGACGAC GAACGGTGCCGGCGGGGACCCGAGACAGCGAAAGGCGACGGATGTCGAGGATCCGGAGCAAGAGAAGCAGTTTCT GGATCGGATTGCCGAAGCTTTGGCGCGATTGAGTCGCGTCAAGAGGGTTGGCTTGACAATGAACGACAAAGCAGC GTTCATTGCGGCCCTGAATGGCAAGAAGTCGTGA |