Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3056
Gene name
LocationContig_178:14514..15195
Strand+
Gene length (bp)681
Transcript length (bp)630
Coding sequence length (bp)630
Protein length (aa) 210

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00857 Isochorismatase Isochorismatase family 2.5E-18 17 183

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 37 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3056
MTPTHSAGGVSFGNNYAILNLDLMTILVDTAKGTAAGDTFIHNFSRWNETVHRKEPRPLTIFTSLSLSSGEPELA
RDAPFTKLVHSFGSFEAGSKDVGLSPSLLLDENDIVLQKTRWYAGAGNSLEQILRAQKVDTVIISGLTLSGVVMS
TIYRLFDLDYNIYVIYDNVLELPVDDHSEAFKVVLETVLSKMNLTMLSVQEALEALARS*
Coding >Hirsu2|3056
ATGACTCCAACCCATAGTGCAGGGGGTGTCTCGTTTGGCAACAACTATGCCATTCTCAACTTGGACCTGATGACG
ATTTTGGTAGACACCGCCAAAGGCACCGCTGCTGGAGACACATTCATTCACAATTTTTCGCGCTGGAATGAGACG
GTTCACCGGAAAGAGCCGCGCCCACTGACCATTTTCACCAGCCTCAGTCTTAGTTCTGGCGAGCCCGAGCTGGCG
AGGGACGCTCCATTCACCAAGCTTGTTCATTCTTTCGGGTCGTTTGAGGCCGGCTCCAAAGACGTGGGATTGTCG
CCCAGTCTGCTTCTCGATGAGAACGACATCGTGCTCCAGAAGACAAGGTGGTATGCTGGCGCAGGTAATAGTTTG
GAGCAGATTCTACGGGCTCAGAAAGTCGACACCGTCATCATCTCCGGTCTCACACTCTCTGGAGTCGTTATGAGC
ACCATATACCGACTTTTTGACTTGGATTATAATATTTACGTCATCTACGACAATGTGTTGGAGCTGCCCGTGGAT
GACCATTCAGAGGCATTCAAAGTGGTATTAGAGACGGTTTTATCCAAGATGAATCTCACGATGCTTTCGGTTCAG
GAAGCCTTGGAAGCACTTGCGAGATCCTAG
Transcript >Hirsu2|3056
ATGACTCCAACCCATAGTGCAGGGGGTGTCTCGTTTGGCAACAACTATGCCATTCTCAACTTGGACCTGATGACG
ATTTTGGTAGACACCGCCAAAGGCACCGCTGCTGGAGACACATTCATTCACAATTTTTCGCGCTGGAATGAGACG
GTTCACCGGAAAGAGCCGCGCCCACTGACCATTTTCACCAGCCTCAGTCTTAGTTCTGGCGAGCCCGAGCTGGCG
AGGGACGCTCCATTCACCAAGCTTGTTCATTCTTTCGGGTCGTTTGAGGCCGGCTCCAAAGACGTGGGATTGTCG
CCCAGTCTGCTTCTCGATGAGAACGACATCGTGCTCCAGAAGACAAGGTGGTATGCTGGCGCAGGTAATAGTTTG
GAGCAGATTCTACGGGCTCAGAAAGTCGACACCGTCATCATCTCCGGTCTCACACTCTCTGGAGTCGTTATGAGC
ACCATATACCGACTTTTTGACTTGGATTATAATATTTACGTCATCTACGACAATGTGTTGGAGCTGCCCGTGGAT
GACCATTCAGAGGCATTCAAAGTGGTATTAGAGACGGTTTTATCCAAGATGAATCTCACGATGCTTTCGGTTCAG
GAAGCCTTGGAAGCACTTGCGAGATCCTAG
Gene >Hirsu2|3056
ATGACTCCAACCCATAGTGCAGGGGGTGTCTCGTTTGGCAACAACTATGCCATTCTCAACTTGGACCTGATGACG
ATTTTGGTAGACACCGCCAAAGGCACCGCTGCTGGAGACACATTCATTCACAATTTTTCGCGCTGGAATGAGACG
GTTCACCGGAAAGAGCCGCGCCCACTGACCATTTTCACCAGCCTCAGTCTTAGTTCTGGCGAGCCCGAGCTGGCG
AGGGACGCTCCATTCACCAAGCTTGTTCATTCTTTCGGGTCGTTTGAGGCCGGCTCCAAAGACGTGGGATTGTCG
CCCAGTCTGCTTCTCGATGAGAACGACATCGTGCTCCAGAAGACAAGGTGGTATGCTGGCGCAGGTAATAGTTTG
GAGCAGATTCTACGGGCTCAGAAAGTCGACACCGTCATCATCGTAAGCCTTGCTTGGTTCTCATAGGGCTTAAGC
CGATGCTGACTATTTCAGTCCGGTCTCACACTCTCTGGAGTCGTTATGAGCACCATATACCGACTTTTTGACTTG
GATTATAATATTTACGTCATCTACGACAATGTGTTGGAGCTGCCCGTGGATGACCATTCAGAGGCATTCAAAGTG
GTATTAGAGACGGTTTTATCCAAGATGAATCTCACGATGCTTTCGGTTCAGGAAGCCTTGGAAGCACTTGCGAGA
TCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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