Protein ID | Hirsu2|3032 |
Gene name | |
Location | Contig_177:22383..24126 |
Strand | - |
Gene length (bp) | 1743 |
Transcript length (bp) | 1743 |
Coding sequence length (bp) | 1743 |
Protein length (aa) | 581 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 17 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 45 | 67 | 22 |
2 | 87 | 109 | 22 |
3 | 141 | 163 | 22 |
4 | 195 | 217 | 22 |
5 | 283 | 305 | 22 |
6 | 362 | 384 | 22 |
7 | 433 | 455 | 22 |
8 | 488 | 507 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3032 MSRQRGLLTLSQASSGRPLIDQPPSHNDDETGSTDLDAAAGTQLGCIAALALGLLLSLLCLGPGIYISSTQPRLA LLLPLSTTAREVLSLAVNVVLTFCIDGMMFVHSVSLRWALYREGRLKSNTNIRLFTSARQSGPNAWYSNVAAVFF LVLSYGASSVLFLANQVDDYKDATPEELASGSQAKAFVGGNYVNGAALIALGLALAGQAAISAWCLLSSPGAIPS WSSNPLNNALAAIRDGSIKHRGGRCMLSVHQKQQSSDREVFPAKKQGSMLEAQGSVRYVLALLWALAALAVAWPI AILAISVSMGTVYAAEKWIQGLDRPPSDWCRRAVTLAWEPTFSNCVRNVVPMMVSPYNNTHISGWALFSPSTEAV LCILFISAIQGAQTVGLHCAELLVNVSRDESAWRRAYVHGGANQNGQGARRAANPFRAVLSSWEALVLFLAKAVL HWTIGQGVLASISRGEGPPDGDEWRPIGIQFEMVYPRLFVYAVLAVALAAFATFLALRRSRGHQPAAMGHLQTLA DLVDDWRTDDEGRMWWGDKTRLLGADGAAPRHAGTSGNKAVLEPIVPNGRYAGSR* |
Coding | >Hirsu2|3032 ATGAGCCGACAACGGGGCTTGTTGACCCTCAGCCAGGCGTCAAGCGGCAGACCATTGATCGACCAGCCGCCTTCA CACAATGACGACGAAACCGGAAGCACTGATCTCGACGCTGCTGCCGGCACGCAGCTCGGCTGCATTGCTGCCCTG GCGCTTGGCCTGCTTCTCTCTCTCCTGTGCCTGGGGCCCGGCATCTATATATCGTCGACGCAGCCGCGGCTCGCG CTGCTGCTCCCTCTGTCGACGACGGCCCGCGAGGTCCTATCCCTGGCCGTCAACGTGGTGCTCACGTTTTGCATC GACGGCATGATGTTTGTGCACTCGGTCTCGCTGCGCTGGGCGCTGTACCGCGAGGGCCGGCTCAAGTCCAACACC AACATCCGGCTCTTCACCAGTGCCAGGCAGAGCGGCCCCAATGCGTGGTACAGCAACGTGGCGGCCGTCTTTTTC CTCGTGCTTTCCTACGGCGCCTCGTCTGTCCTGTTCCTGGCAAACCAGGTCGACGATTATAAAGACGCGACGCCG GAGGAGCTGGCCAGTGGCTCCCAGGCGAAGGCGTTCGTTGGTGGGAACTACGTGAACGGGGCAGCCCTCATCGCG CTTGGACTGGCACTTGCGGGCCAGGCTGCCATCTCGGCATGGTGCCTCTTGTCTAGCCCTGGGGCAATACCCTCG TGGAGCTCGAATCCCCTGAACAACGCCCTGGCCGCGATTCGAGACGGAAGCATCAAGCATCGCGGCGGAAGATGC ATGCTCTCGGTCCATCAGAAGCAGCAATCCTCCGACCGAGAAGTCTTTCCGGCCAAGAAACAAGGAAGCATGTTG GAAGCACAAGGCAGCGTGCGATATGTCCTGGCCTTGCTATGGGCCCTTGCCGCCCTCGCCGTTGCCTGGCCTATC GCCATCCTCGCCATCTCCGTCAGCATGGGCACCGTCTATGCGGCCGAGAAATGGATCCAAGGTCTTGACAGGCCG CCGTCAGACTGGTGCCGGCGAGCCGTGACGCTTGCCTGGGAGCCTACTTTCTCGAACTGCGTCCGTAACGTAGTG CCGATGATGGTGTCGCCCTATAACAACACCCATATCTCAGGATGGGCCTTGTTCTCGCCCTCTACCGAGGCCGTG CTCTGCATCCTCTTCATCAGCGCCATCCAGGGGGCTCAGACAGTCGGCCTGCATTGCGCGGAGCTGCTCGTCAAC GTATCGAGAGACGAGAGCGCCTGGCGACGCGCCTACGTCCACGGTGGCGCGAATCAAAACGGCCAAGGGGCACGG CGGGCCGCCAACCCATTCCGCGCCGTCCTGTCGAGCTGGGAGGCCCTCGTCCTATTCCTAGCCAAGGCGGTGCTA CACTGGACCATCGGCCAGGGTGTGCTCGCCTCCATCTCCCGCGGCGAAGGGCCGCCAGACGGAGACGAATGGCGC CCGATCGGGATCCAGTTTGAAATGGTCTATCCTCGGCTTTTCGTCTACGCCGTCCTGGCCGTCGCGCTCGCCGCC TTTGCCACGTTCCTGGCTCTGAGGCGCTCTCGCGGCCACCAGCCGGCTGCCATGGGGCATCTGCAGACGCTTGCC GATCTCGTCGATGACTGGAGGACCGACGACGAGGGCCGGATGTGGTGGGGAGACAAGACCCGCCTCCTCGGGGCT GACGGCGCTGCGCCGAGGCACGCCGGGACAAGCGGGAACAAAGCGGTGCTCGAACCCATAGTCCCGAACGGACGG TATGCTGGAAGCAGGTGA |
Transcript | >Hirsu2|3032 ATGAGCCGACAACGGGGCTTGTTGACCCTCAGCCAGGCGTCAAGCGGCAGACCATTGATCGACCAGCCGCCTTCA CACAATGACGACGAAACCGGAAGCACTGATCTCGACGCTGCTGCCGGCACGCAGCTCGGCTGCATTGCTGCCCTG GCGCTTGGCCTGCTTCTCTCTCTCCTGTGCCTGGGGCCCGGCATCTATATATCGTCGACGCAGCCGCGGCTCGCG CTGCTGCTCCCTCTGTCGACGACGGCCCGCGAGGTCCTATCCCTGGCCGTCAACGTGGTGCTCACGTTTTGCATC GACGGCATGATGTTTGTGCACTCGGTCTCGCTGCGCTGGGCGCTGTACCGCGAGGGCCGGCTCAAGTCCAACACC AACATCCGGCTCTTCACCAGTGCCAGGCAGAGCGGCCCCAATGCGTGGTACAGCAACGTGGCGGCCGTCTTTTTC CTCGTGCTTTCCTACGGCGCCTCGTCTGTCCTGTTCCTGGCAAACCAGGTCGACGATTATAAAGACGCGACGCCG GAGGAGCTGGCCAGTGGCTCCCAGGCGAAGGCGTTCGTTGGTGGGAACTACGTGAACGGGGCAGCCCTCATCGCG CTTGGACTGGCACTTGCGGGCCAGGCTGCCATCTCGGCATGGTGCCTCTTGTCTAGCCCTGGGGCAATACCCTCG TGGAGCTCGAATCCCCTGAACAACGCCCTGGCCGCGATTCGAGACGGAAGCATCAAGCATCGCGGCGGAAGATGC ATGCTCTCGGTCCATCAGAAGCAGCAATCCTCCGACCGAGAAGTCTTTCCGGCCAAGAAACAAGGAAGCATGTTG GAAGCACAAGGCAGCGTGCGATATGTCCTGGCCTTGCTATGGGCCCTTGCCGCCCTCGCCGTTGCCTGGCCTATC GCCATCCTCGCCATCTCCGTCAGCATGGGCACCGTCTATGCGGCCGAGAAATGGATCCAAGGTCTTGACAGGCCG CCGTCAGACTGGTGCCGGCGAGCCGTGACGCTTGCCTGGGAGCCTACTTTCTCGAACTGCGTCCGTAACGTAGTG CCGATGATGGTGTCGCCCTATAACAACACCCATATCTCAGGATGGGCCTTGTTCTCGCCCTCTACCGAGGCCGTG CTCTGCATCCTCTTCATCAGCGCCATCCAGGGGGCTCAGACAGTCGGCCTGCATTGCGCGGAGCTGCTCGTCAAC GTATCGAGAGACGAGAGCGCCTGGCGACGCGCCTACGTCCACGGTGGCGCGAATCAAAACGGCCAAGGGGCACGG CGGGCCGCCAACCCATTCCGCGCCGTCCTGTCGAGCTGGGAGGCCCTCGTCCTATTCCTAGCCAAGGCGGTGCTA CACTGGACCATCGGCCAGGGTGTGCTCGCCTCCATCTCCCGCGGCGAAGGGCCGCCAGACGGAGACGAATGGCGC CCGATCGGGATCCAGTTTGAAATGGTCTATCCTCGGCTTTTCGTCTACGCCGTCCTGGCCGTCGCGCTCGCCGCC TTTGCCACGTTCCTGGCTCTGAGGCGCTCTCGCGGCCACCAGCCGGCTGCCATGGGGCATCTGCAGACGCTTGCC GATCTCGTCGATGACTGGAGGACCGACGACGAGGGCCGGATGTGGTGGGGAGACAAGACCCGCCTCCTCGGGGCT GACGGCGCTGCGCCGAGGCACGCCGGGACAAGCGGGAACAAAGCGGTGCTCGAACCCATAGTCCCGAACGGACGG TATGCTGGAAGCAGGTGA |
Gene | >Hirsu2|3032 ATGAGCCGACAACGGGGCTTGTTGACCCTCAGCCAGGCGTCAAGCGGCAGACCATTGATCGACCAGCCGCCTTCA CACAATGACGACGAAACCGGAAGCACTGATCTCGACGCTGCTGCCGGCACGCAGCTCGGCTGCATTGCTGCCCTG GCGCTTGGCCTGCTTCTCTCTCTCCTGTGCCTGGGGCCCGGCATCTATATATCGTCGACGCAGCCGCGGCTCGCG CTGCTGCTCCCTCTGTCGACGACGGCCCGCGAGGTCCTATCCCTGGCCGTCAACGTGGTGCTCACGTTTTGCATC GACGGCATGATGTTTGTGCACTCGGTCTCGCTGCGCTGGGCGCTGTACCGCGAGGGCCGGCTCAAGTCCAACACC AACATCCGGCTCTTCACCAGTGCCAGGCAGAGCGGCCCCAATGCGTGGTACAGCAACGTGGCGGCCGTCTTTTTC CTCGTGCTTTCCTACGGCGCCTCGTCTGTCCTGTTCCTGGCAAACCAGGTCGACGATTATAAAGACGCGACGCCG GAGGAGCTGGCCAGTGGCTCCCAGGCGAAGGCGTTCGTTGGTGGGAACTACGTGAACGGGGCAGCCCTCATCGCG CTTGGACTGGCACTTGCGGGCCAGGCTGCCATCTCGGCATGGTGCCTCTTGTCTAGCCCTGGGGCAATACCCTCG TGGAGCTCGAATCCCCTGAACAACGCCCTGGCCGCGATTCGAGACGGAAGCATCAAGCATCGCGGCGGAAGATGC ATGCTCTCGGTCCATCAGAAGCAGCAATCCTCCGACCGAGAAGTCTTTCCGGCCAAGAAACAAGGAAGCATGTTG GAAGCACAAGGCAGCGTGCGATATGTCCTGGCCTTGCTATGGGCCCTTGCCGCCCTCGCCGTTGCCTGGCCTATC GCCATCCTCGCCATCTCCGTCAGCATGGGCACCGTCTATGCGGCCGAGAAATGGATCCAAGGTCTTGACAGGCCG CCGTCAGACTGGTGCCGGCGAGCCGTGACGCTTGCCTGGGAGCCTACTTTCTCGAACTGCGTCCGTAACGTAGTG CCGATGATGGTGTCGCCCTATAACAACACCCATATCTCAGGATGGGCCTTGTTCTCGCCCTCTACCGAGGCCGTG CTCTGCATCCTCTTCATCAGCGCCATCCAGGGGGCTCAGACAGTCGGCCTGCATTGCGCGGAGCTGCTCGTCAAC GTATCGAGAGACGAGAGCGCCTGGCGACGCGCCTACGTCCACGGTGGCGCGAATCAAAACGGCCAAGGGGCACGG CGGGCCGCCAACCCATTCCGCGCCGTCCTGTCGAGCTGGGAGGCCCTCGTCCTATTCCTAGCCAAGGCGGTGCTA CACTGGACCATCGGCCAGGGTGTGCTCGCCTCCATCTCCCGCGGCGAAGGGCCGCCAGACGGAGACGAATGGCGC CCGATCGGGATCCAGTTTGAAATGGTCTATCCTCGGCTTTTCGTCTACGCCGTCCTGGCCGTCGCGCTCGCCGCC TTTGCCACGTTCCTGGCTCTGAGGCGCTCTCGCGGCCACCAGCCGGCTGCCATGGGGCATCTGCAGACGCTTGCC GATCTCGTCGATGACTGGAGGACCGACGACGAGGGCCGGATGTGGTGGGGAGACAAGACCCGCCTCCTCGGGGCT GACGGCGCTGCGCCGAGGCACGCCGGGACAAGCGGGAACAAAGCGGTGCTCGAACCCATAGTCCCGAACGGACGG TATGCTGGAAGCAGGTGA |