Protein ID | Hirsu2|3029 |
Gene name | |
Location | Contig_177:16107..16992 |
Strand | + |
Gene length (bp) | 885 |
Transcript length (bp) | 885 |
Coding sequence length (bp) | 885 |
Protein length (aa) | 295 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13489 | Methyltransf_23 | Methyltransferase domain | 1.5E-11 | 47 | 222 |
PF13649 | Methyltransf_25 | Methyltransferase domain | 2.1E-07 | 53 | 154 |
PF01135 | PCMT | Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) | 1.3E-04 | 44 | 81 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 14 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3029 MSTSFEPIPSSLAAQIAASNYTLSPEHLSVEVGQAEHRIQLVNQWRIPASSRILEIGCGQGTCTAVLAAAVGADG HVDAVDPSPPDYGAPVTLGQAQSHLSAGPFGSRITWHRAETTSFLADHPHERWDYAVLAHSIWYFDSPEELSEIL PALKDRCGTLVVAEYALTATHAHALPHVLTAIAQGLLHREMQKPATEANIRCLLSPDGIKGAAQDAGWRLESESV VVPGDALLDGSWDTSMVQSRGFEEEVENIHDSTAKALLRSSRDAVAGAVKSLGGNKPRTMDVWVARFAS* |
Coding | >Hirsu2|3029 ATGTCGACCTCGTTTGAGCCCATTCCCTCCTCTCTTGCCGCCCAAATCGCTGCCAGCAACTACACCTTGAGCCCG GAGCACCTATCAGTCGAAGTCGGACAGGCGGAGCACAGGATCCAGCTCGTCAACCAGTGGCGCATCCCCGCCAGC AGTAGGATCCTAGAAATCGGCTGCGGGCAGGGCACTTGCACGGCGGTGCTGGCGGCAGCCGTTGGGGCCGATGGC CACGTCGACGCCGTAGACCCGAGCCCTCCGGACTACGGCGCCCCCGTCACCCTCGGCCAGGCGCAGTCGCACCTC TCGGCCGGGCCCTTCGGGTCCCGTATCACCTGGCATCGCGCCGAGACGACCAGCTTCTTAGCTGACCATCCGCAT GAGAGGTGGGACTACGCCGTCCTAGCACACTCCATCTGGTACTTCGACTCGCCCGAGGAGCTGTCTGAGATCCTG CCGGCGCTCAAGGACCGCTGTGGCACGCTCGTCGTGGCCGAGTATGCCCTGACGGCGACGCATGCGCACGCCTTG CCGCACGTCTTGACCGCCATAGCACAAGGCCTGCTGCATCGCGAGATGCAGAAGCCGGCGACCGAGGCCAACATT CGTTGTCTCCTTAGCCCCGACGGCATCAAGGGCGCCGCGCAGGACGCGGGCTGGCGCCTCGAGAGCGAGTCTGTT GTCGTTCCAGGCGATGCCTTGTTGGATGGAAGCTGGGATACGTCCATGGTGCAGAGCAGGGGATTCGAAGAGGAG GTTGAGAATATTCACGACTCCACAGCCAAGGCGCTCCTAAGGTCGTCTCGGGACGCCGTTGCAGGAGCTGTTAAG TCCCTGGGAGGGAACAAGCCGAGAACCATGGACGTTTGGGTTGCACGGTTCGCGTCTTAG |
Transcript | >Hirsu2|3029 ATGTCGACCTCGTTTGAGCCCATTCCCTCCTCTCTTGCCGCCCAAATCGCTGCCAGCAACTACACCTTGAGCCCG GAGCACCTATCAGTCGAAGTCGGACAGGCGGAGCACAGGATCCAGCTCGTCAACCAGTGGCGCATCCCCGCCAGC AGTAGGATCCTAGAAATCGGCTGCGGGCAGGGCACTTGCACGGCGGTGCTGGCGGCAGCCGTTGGGGCCGATGGC CACGTCGACGCCGTAGACCCGAGCCCTCCGGACTACGGCGCCCCCGTCACCCTCGGCCAGGCGCAGTCGCACCTC TCGGCCGGGCCCTTCGGGTCCCGTATCACCTGGCATCGCGCCGAGACGACCAGCTTCTTAGCTGACCATCCGCAT GAGAGGTGGGACTACGCCGTCCTAGCACACTCCATCTGGTACTTCGACTCGCCCGAGGAGCTGTCTGAGATCCTG CCGGCGCTCAAGGACCGCTGTGGCACGCTCGTCGTGGCCGAGTATGCCCTGACGGCGACGCATGCGCACGCCTTG CCGCACGTCTTGACCGCCATAGCACAAGGCCTGCTGCATCGCGAGATGCAGAAGCCGGCGACCGAGGCCAACATT CGTTGTCTCCTTAGCCCCGACGGCATCAAGGGCGCCGCGCAGGACGCGGGCTGGCGCCTCGAGAGCGAGTCTGTT GTCGTTCCAGGCGATGCCTTGTTGGATGGAAGCTGGGATACGTCCATGGTGCAGAGCAGGGGATTCGAAGAGGAG GTTGAGAATATTCACGACTCCACAGCCAAGGCGCTCCTAAGGTCGTCTCGGGACGCCGTTGCAGGAGCTGTTAAG TCCCTGGGAGGGAACAAGCCGAGAACCATGGACGTTTGGGTTGCACGGTTCGCGTCTTAG |
Gene | >Hirsu2|3029 ATGTCGACCTCGTTTGAGCCCATTCCCTCCTCTCTTGCCGCCCAAATCGCTGCCAGCAACTACACCTTGAGCCCG GAGCACCTATCAGTCGAAGTCGGACAGGCGGAGCACAGGATCCAGCTCGTCAACCAGTGGCGCATCCCCGCCAGC AGTAGGATCCTAGAAATCGGCTGCGGGCAGGGCACTTGCACGGCGGTGCTGGCGGCAGCCGTTGGGGCCGATGGC CACGTCGACGCCGTAGACCCGAGCCCTCCGGACTACGGCGCCCCCGTCACCCTCGGCCAGGCGCAGTCGCACCTC TCGGCCGGGCCCTTCGGGTCCCGTATCACCTGGCATCGCGCCGAGACGACCAGCTTCTTAGCTGACCATCCGCAT GAGAGGTGGGACTACGCCGTCCTAGCACACTCCATCTGGTACTTCGACTCGCCCGAGGAGCTGTCTGAGATCCTG CCGGCGCTCAAGGACCGCTGTGGCACGCTCGTCGTGGCCGAGTATGCCCTGACGGCGACGCATGCGCACGCCTTG CCGCACGTCTTGACCGCCATAGCACAAGGCCTGCTGCATCGCGAGATGCAGAAGCCGGCGACCGAGGCCAACATT CGTTGTCTCCTTAGCCCCGACGGCATCAAGGGCGCCGCGCAGGACGCGGGCTGGCGCCTCGAGAGCGAGTCTGTT GTCGTTCCAGGCGATGCCTTGTTGGATGGAAGCTGGGATACGTCCATGGTGCAGAGCAGGGGATTCGAAGAGGAG GTTGAGAATATTCACGACTCCACAGCCAAGGCGCTCCTAAGGTCGTCTCGGGACGCCGTTGCAGGAGCTGTTAAG TCCCTGGGAGGGAACAAGCCGAGAACCATGGACGTTTGGGTTGCACGGTTCGCGTCTTAG |