Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3023
Gene name
LocationContig_177:1726..3238
Strand-
Gene length (bp)1512
Transcript length (bp)1512
Coding sequence length (bp)1512
Protein length (aa) 504

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11709 Mit_ribos_Mrp51 Mitochondrial ribosomal protein subunit 5.4E-117 6 403

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3023
MGVRAVSPGEALLRNSRMFSMPKPLPDPYSTSYNVGEHRSPTTTKPYPQQQSIATPFSSRERGDWGLKRPFPFKS
TMTTSTPLIRVNHVDSRESVTDFASAAAYTMSLEKFQELRLPLYTRRNKEFQTKAKEQSASSQEFKLFSRSVFED
FLDFTELPRAGDANNRRWRFKGPWLARMTPGDFNTYLENQVRPRRAQFKALLKSMLARKITEDRNKAAADKGLPP
PPPVQAGKITQDEFTEYLRRLRNDRPTLYTMISDFLDMAPLGRPNISIYGKLSGTNQDPNDGPYAKSGPPRCHPS
AGISYLRTDSFMENHPVYGPQAKKTPVMARILVPKVSQAVGAKLGVGGFVAEAPGDYTRFNVSHQRKAKGLTVFD
TQTYGGAKMLVHPASANIDPSGKVVMELKEAKEEAQLVYKESKGLLHPPIYNDGDGMAQALDPTAAMQSPAGDQS
LGGLGIDGAAVPSPGSEQVQGGAETQGVDQMGEYDQVQDGSPSSSAQQSRGRW*
Coding >Hirsu2|3023
ATGGGGGTCCGCGCCGTGTCGCCCGGCGAGGCTCTTCTGAGGAACTCGCGCATGTTCTCCATGCCCAAGCCTCTC
CCCGATCCCTACTCGACCAGCTACAATGTCGGCGAGCATCGGTCGCCGACGACGACGAAGCCCTATCCCCAGCAA
CAATCCATCGCGACGCCCTTCTCGTCGCGCGAGAGGGGCGACTGGGGGCTGAAGCGCCCCTTTCCTTTCAAATCT
ACCATGACGACATCGACTCCCCTCATCCGCGTCAACCACGTCGATTCTCGCGAGAGCGTGACCGACTTCGCCTCG
GCTGCCGCCTACACAATGTCGTTGGAGAAGTTCCAGGAGCTTCGCCTGCCACTCTACACACGCAGAAATAAGGAG
TTTCAGACAAAGGCCAAGGAGCAGAGCGCCAGCAGCCAAGAATTCAAGCTCTTCTCCCGTTCCGTATTCGAGGAT
TTTTTGGATTTCACCGAGCTGCCACGCGCCGGCGACGCCAACAACCGACGCTGGAGATTCAAGGGCCCGTGGCTG
GCCAGGATGACGCCGGGAGACTTCAACACGTACCTGGAGAATCAGGTGCGGCCCCGACGCGCCCAGTTCAAGGCT
CTGCTCAAGTCGATGCTGGCGCGGAAGATCACGGAGGATCGGAACAAGGCGGCGGCAGACAAGGGCCTACCACCA
CCACCGCCCGTGCAGGCTGGCAAGATCACGCAGGACGAGTTCACCGAGTACCTACGAAGGCTGCGCAACGATCGC
CCCACCTTGTACACCATGATCTCGGATTTCTTGGACATGGCACCGCTGGGACGACCAAATATCTCCATCTACGGC
AAGCTTTCTGGAACGAACCAAGACCCGAACGACGGCCCGTACGCAAAGTCCGGGCCACCTCGTTGCCATCCCTCT
GCGGGAATCAGCTATCTACGCACCGATTCCTTCATGGAGAACCATCCCGTCTACGGGCCGCAGGCGAAAAAGACA
CCCGTCATGGCTCGCATCCTCGTGCCCAAGGTCAGCCAAGCGGTGGGTGCTAAGCTCGGAGTCGGCGGCTTCGTG
GCGGAGGCGCCGGGCGACTACACCCGGTTCAACGTCAGCCACCAAAGAAAGGCCAAAGGCCTCACCGTCTTTGAC
ACGCAGACGTATGGCGGGGCCAAGATGCTCGTCCACCCGGCGAGTGCCAACATCGATCCGAGCGGCAAGGTCGTG
ATGGAACTCAAGGAGGCCAAGGAGGAGGCGCAGCTCGTGTACAAGGAAAGCAAAGGCCTGCTGCATCCGCCCATC
TACAACGACGGTGACGGCATGGCCCAGGCACTCGACCCAACGGCGGCGATGCAGAGTCCTGCAGGAGACCAGAGT
CTGGGTGGTCTGGGTATCGACGGCGCAGCGGTGCCGTCTCCGGGGAGCGAGCAGGTGCAGGGGGGGGCTGAGACG
CAGGGCGTCGACCAGATGGGAGAGTATGATCAGGTGCAGGACGGTAGCCCGTCTTCCTCTGCGCAGCAAAGCCGA
GGCAGATGGTGA
Transcript >Hirsu2|3023
ATGGGGGTCCGCGCCGTGTCGCCCGGCGAGGCTCTTCTGAGGAACTCGCGCATGTTCTCCATGCCCAAGCCTCTC
CCCGATCCCTACTCGACCAGCTACAATGTCGGCGAGCATCGGTCGCCGACGACGACGAAGCCCTATCCCCAGCAA
CAATCCATCGCGACGCCCTTCTCGTCGCGCGAGAGGGGCGACTGGGGGCTGAAGCGCCCCTTTCCTTTCAAATCT
ACCATGACGACATCGACTCCCCTCATCCGCGTCAACCACGTCGATTCTCGCGAGAGCGTGACCGACTTCGCCTCG
GCTGCCGCCTACACAATGTCGTTGGAGAAGTTCCAGGAGCTTCGCCTGCCACTCTACACACGCAGAAATAAGGAG
TTTCAGACAAAGGCCAAGGAGCAGAGCGCCAGCAGCCAAGAATTCAAGCTCTTCTCCCGTTCCGTATTCGAGGAT
TTTTTGGATTTCACCGAGCTGCCACGCGCCGGCGACGCCAACAACCGACGCTGGAGATTCAAGGGCCCGTGGCTG
GCCAGGATGACGCCGGGAGACTTCAACACGTACCTGGAGAATCAGGTGCGGCCCCGACGCGCCCAGTTCAAGGCT
CTGCTCAAGTCGATGCTGGCGCGGAAGATCACGGAGGATCGGAACAAGGCGGCGGCAGACAAGGGCCTACCACCA
CCACCGCCCGTGCAGGCTGGCAAGATCACGCAGGACGAGTTCACCGAGTACCTACGAAGGCTGCGCAACGATCGC
CCCACCTTGTACACCATGATCTCGGATTTCTTGGACATGGCACCGCTGGGACGACCAAATATCTCCATCTACGGC
AAGCTTTCTGGAACGAACCAAGACCCGAACGACGGCCCGTACGCAAAGTCCGGGCCACCTCGTTGCCATCCCTCT
GCGGGAATCAGCTATCTACGCACCGATTCCTTCATGGAGAACCATCCCGTCTACGGGCCGCAGGCGAAAAAGACA
CCCGTCATGGCTCGCATCCTCGTGCCCAAGGTCAGCCAAGCGGTGGGTGCTAAGCTCGGAGTCGGCGGCTTCGTG
GCGGAGGCGCCGGGCGACTACACCCGGTTCAACGTCAGCCACCAAAGAAAGGCCAAAGGCCTCACCGTCTTTGAC
ACGCAGACGTATGGCGGGGCCAAGATGCTCGTCCACCCGGCGAGTGCCAACATCGATCCGAGCGGCAAGGTCGTG
ATGGAACTCAAGGAGGCCAAGGAGGAGGCGCAGCTCGTGTACAAGGAAAGCAAAGGCCTGCTGCATCCGCCCATC
TACAACGACGGTGACGGCATGGCCCAGGCACTCGACCCAACGGCGGCGATGCAGAGTCCTGCAGGAGACCAGAGT
CTGGGTGGTCTGGGTATCGACGGCGCAGCGGTGCCGTCTCCGGGGAGCGAGCAGGTGCAGGGGGGGGCTGAGACG
CAGGGCGTCGACCAGATGGGAGAGTATGATCAGGTGCAGGACGGTAGCCCGTCTTCCTCTGCGCAGCAAAGCCGA
GGCAGATGGTGA
Gene >Hirsu2|3023
ATGGGGGTCCGCGCCGTGTCGCCCGGCGAGGCTCTTCTGAGGAACTCGCGCATGTTCTCCATGCCCAAGCCTCTC
CCCGATCCCTACTCGACCAGCTACAATGTCGGCGAGCATCGGTCGCCGACGACGACGAAGCCCTATCCCCAGCAA
CAATCCATCGCGACGCCCTTCTCGTCGCGCGAGAGGGGCGACTGGGGGCTGAAGCGCCCCTTTCCTTTCAAATCT
ACCATGACGACATCGACTCCCCTCATCCGCGTCAACCACGTCGATTCTCGCGAGAGCGTGACCGACTTCGCCTCG
GCTGCCGCCTACACAATGTCGTTGGAGAAGTTCCAGGAGCTTCGCCTGCCACTCTACACACGCAGAAATAAGGAG
TTTCAGACAAAGGCCAAGGAGCAGAGCGCCAGCAGCCAAGAATTCAAGCTCTTCTCCCGTTCCGTATTCGAGGAT
TTTTTGGATTTCACCGAGCTGCCACGCGCCGGCGACGCCAACAACCGACGCTGGAGATTCAAGGGCCCGTGGCTG
GCCAGGATGACGCCGGGAGACTTCAACACGTACCTGGAGAATCAGGTGCGGCCCCGACGCGCCCAGTTCAAGGCT
CTGCTCAAGTCGATGCTGGCGCGGAAGATCACGGAGGATCGGAACAAGGCGGCGGCAGACAAGGGCCTACCACCA
CCACCGCCCGTGCAGGCTGGCAAGATCACGCAGGACGAGTTCACCGAGTACCTACGAAGGCTGCGCAACGATCGC
CCCACCTTGTACACCATGATCTCGGATTTCTTGGACATGGCACCGCTGGGACGACCAAATATCTCCATCTACGGC
AAGCTTTCTGGAACGAACCAAGACCCGAACGACGGCCCGTACGCAAAGTCCGGGCCACCTCGTTGCCATCCCTCT
GCGGGAATCAGCTATCTACGCACCGATTCCTTCATGGAGAACCATCCCGTCTACGGGCCGCAGGCGAAAAAGACA
CCCGTCATGGCTCGCATCCTCGTGCCCAAGGTCAGCCAAGCGGTGGGTGCTAAGCTCGGAGTCGGCGGCTTCGTG
GCGGAGGCGCCGGGCGACTACACCCGGTTCAACGTCAGCCACCAAAGAAAGGCCAAAGGCCTCACCGTCTTTGAC
ACGCAGACGTATGGCGGGGCCAAGATGCTCGTCCACCCGGCGAGTGCCAACATCGATCCGAGCGGCAAGGTCGTG
ATGGAACTCAAGGAGGCCAAGGAGGAGGCGCAGCTCGTGTACAAGGAAAGCAAAGGCCTGCTGCATCCGCCCATC
TACAACGACGGTGACGGCATGGCCCAGGCACTCGACCCAACGGCGGCGATGCAGAGTCCTGCAGGAGACCAGAGT
CTGGGTGGTCTGGGTATCGACGGCGCAGCGGTGCCGTCTCCGGGGAGCGAGCAGGTGCAGGGGGGGGCTGAGACG
CAGGGCGTCGACCAGATGGGAGAGTATGATCAGGTGCAGGACGGTAGCCCGTCTTCCTCTGCGCAGCAAAGCCGA
GGCAGATGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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